FB2026_03 , released September 17, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000095741
Interaction Network
Interactions Browser links
Scr network
Reported Interactions
FBrf0218494-1.FC
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Scr 

SynthScr

bait

Venus tag, N-terminal fragment

Scr 

SynthScr

prey

Venus tag, C-terminal fragment

Scr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Scr 
synthetic construct
sufficient binding region
aa 301-417

contains YPWM motif, homeodomain and C-terminus

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Scr is tagged with N- or C-terminal portions of Venus fluorescent protein that fluoresce when two Scr molecules containing complementary fragments interact.

Bait expressed in transfected HEK 293 T cells.

Prey expressed in transfected HEK 293 T cells.

FBrf0218494-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Scr 

Scr

bait

V5 tag

Scr 

Scr

prey

FLAG tag

Scr 
Scr 
Scr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Scr 
synthetic construct
sufficient binding region
aa 301-417

contains YPWM motif, homeodomain and C-terminus

Scr 
ELEKEF motif
necessary binding region
aa 338-343

E342G mutation abolishes interaction

Scr 
phosphorylation sites
necessary binding region
aa 329-330

T329D and S330D mutations weaken interaction

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

To test for homodimerization, V5-tagged Scr was affinity captured and probed for coimmunoprecipitation of FLAG-tagged Scr.

Mutation of Thr and Ser residues to Asp phosphomimics the inactive state of Scr.

Bait expressed in transfected HEK 293 T cells.

Prey expressed in transfected HEK 293 T cells.

Mutation of Thr and Ser residues in the homeodomain weakens homodimerization of minimal Scr constructs, but not full length Scr.

FBrf0218494-3.FC
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Scr 

SynthScr

bait

Venus tag, N-terminal fragment

Scr 

SynthScr

prey

Venus tag, C-terminal fragment

Scr 
Scr 
Scr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Scr 
synthetic construct
sufficient binding region
aa 301-417

contains YPWM motif, homeodomain and C-terminus

Scr 
ELEKEF motif
necessary binding region
aa 338-343

E342G mutation greatly weakens interaction

Scr 
phosphorylation sites
necessary binding region
aa 329-330

T329D and S330D mutations weaken interaction

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Scr is tagged with N- or C-terminal portions of Venus fluorescent protein that fluoresce when two Scr molecules containing complementary fragments interact.

Mutation of Thr and Ser residues to Asp phosphomimics the inactive state of Scr.

Proteins derived from a transgenic line carrying Venus-tagged UAS-Scr constructs.

FBrf0218494-4.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Scr 

SynthAntpScr

bait

V5 tag

Scr 

SynthAntpScr

prey

FLAG tag

Scr 
Scr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Scr 
C terminal region
sufficient binding region
aa 384-417
Scr 
linker
sufficient binding region
aa 309-323
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Portions of Antp, which does not homodimerize, were replaced with corresponding portions of Scr, which does homodimerize, to map regions of Scr that mediate homodimerization.

To test for homodimerization, V5-tagged Antp-Scr chimeric protein was affinity captured and probed for coimmunoprecipitation of FLAG-tagged Antp-Scr chimeric protein.

Bait expressed in transfected HEK 293 T cells.

Prey expressed in transfected HEK 293 T cells.

The Scr linker region (between YPWM motif and homeodomain) can interact with the Scr C-terminus.

FBrf0233492-1a.BiFC.FM
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Scr 

Scr

bait

Venus tag, N-terminal fragment

Scr 

Scr

prey

Venus tag, C-terminal fragment

Scr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Scr 
homeodomain residues T329 and S330
mutation disrupting interaction
aa 329-330

"DD" construct, T329D and S330D, coordinates relative to Scr-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live larval salivary gland cells; proteins produced from tagged transgenic constructs.

External Crossreferences and Linkouts ( 0 )
References (2)