FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Physical Interaction report
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General Information
Interaction Type
physical association
Interacting Genes
hry, CLIP-190
FlyBase ID
FBig0000099099
Interaction Network
Interactions Browser links
hry network
CLIP-190 network
Reported Interactions
FBrf0222317-19.PD.MS
Reference
Dix et al., 2013
Description
physical association
Assay
Collection
Source/Stage
organism / embryonic stage 1embryonic stage 12blastoderm stagegastrula stageembryonic stage 8embryonic stage 9embryonic stage 6early extended germ band stageembryonic cycle 3embryonic stage 4embryonic stage 2embryonic cycle 9embryonic stage 5embryonic stage 11embryonic stage 3embryonic cycle 6embryonic cycle 5embryonic cycle 8embryonic cycle 7embryonic cycle 4embryonic stage 10embryonic stage 7
Cell line used
Participants
Corresponds to
Reported as
Role
Note
hry 

hairy

bait

TRAP tag

hry 
hry 
CLIP-190 

CLIP-190

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
hry 
HLE
sufficient binding region
CAUUUCACAUCAUUCGCCGGGAUUGCGCAAAUGUUGCUUUGAAGUGUUGCAAACAUGCGAAUCCUAAACUCGGUUCACAACUUCGUUGGCUUAGUUUCCUGGCUUAUAUCCUGGAAACCCGUCGAC
hry 
HLE-SL1
mutation disrupting interaction
nt 41-43

GAA-to-CUU

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads. Less stringent wash conditions were used in these purifications (compared to a previous study, FBrf0208220).

(Dix et al., 2013)

Though CLIP-190 binds apical RNA localization signals specifically, it does not appear to be required for apical RNA transport.

(Dix et al., 2013)

Interaction in vitro; bait produced by in vitro transcription; prey derived from wild-type embryonic extract.

(Dix et al., 2013)
FBrf0222317-32.PD.WB
Reference
Dix et al., 2013
Description
physical association
Assay
Collection
Source/Stage
organism / embryonic stage 1embryonic stage 12blastoderm stagegastrula stageembryonic stage 8embryonic stage 9embryonic stage 6early extended germ band stageembryonic cycle 3embryonic stage 4embryonic stage 2embryonic cycle 9embryonic stage 5embryonic stage 11embryonic stage 3embryonic cycle 6embryonic cycle 5embryonic cycle 8embryonic cycle 7embryonic cycle 4embryonic stage 10embryonic stage 7
Cell line used
Participants
Corresponds to
Reported as
Role
Note
hry 

hairy

bait

TRAP tag

hry 
hry 
CLIP-190 

CLIP-190

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
hry 
HLE
sufficient binding region
CAUUUCACAUCAUUCGCCGGGAUUGCGCAAAUGUUGCUUUGAAGUGUUGCAAACAUGCGAAUCCUAAACUCGGUUCACAACUUCGUUGGCUUAGUUUCCUGGCUUAUAUCCUGGAAACCCGUCGAC
hry 
HLE-SL1
mutation disrupting interaction
nt 41-43

GAA-to-CUU

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads. Less stringent wash conditions were used in these purifications (compared to a previous study, FBrf0208220).

(Dix et al., 2013)

Though CLIP-190 binds apical RNA localization signals specifically, it does not appear to be required for apical RNA transport.

(Dix et al., 2013)

Interaction in vitro; bait produced by in vitro transcription; prey derived from wild-type embryonic extract.

(Dix et al., 2013)
External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (1)