FB2026_03 , released September 17, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000102079
Interaction Network
Interactions Browser links
Ssu72 network
Polr2A network
Reported Interactions
FBrf0213130-1.ENZ.PA
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ssu72

enzyme

His tag

Ssu72

enzyme

His tag

RNA Pol II

enzyme target

His tag, P[32] label

RNA Pol II

enzyme target

His tag, P[32] label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0222727-3.XC
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ssu72

neutral component

Ssu72

neutral component

Ssu72

neutral component

CTD peptide

neutral component

CTD peptide

neutral component

CTD peptide

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
CTD heptad repeat
sufficient binding region
SPSYSPTSPSYSPTSPSYS

YSPTSPS represents a single repeat unit

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Purified Sym and Ssu72 were incubated and isolated by preparative gel filtration.

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced as a recombinant fusion protein in bacterial system.

Fig3, Tbl1.

FBrf0222727-4.ENZ.MS
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ssu72

enzyme

Ssu72

enzyme

CTD peptide

enzyme target

CTD peptide

enzyme target
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0242446-1.ENZ.MS
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ssu72

enzyme

His tag

Ssu72

enzyme

His tag

CTD

enzyme target

CTD

enzyme target
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0242446-2.XC
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Ssu72

neutral component

His tag

Ssu72

neutral component

His tag

Ssu72

neutral component

His tag

CTD

neutral component

CTD

neutral component

CTD

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
interaction domain
sufficient binding region
SPSYSPTSPSYSPTSPSYS
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; protein produced as a recombinant fusion protein in bacterial system; peptide commercially synthesized.

In this experiment, Ssu72 is complexed with Sym to increase its stability and is the catalytically inactive C13D/D144N form. The crystal structure shows the best fit with a RpII215 peptide phosphorylated on Ser5 explaining preference for this substrate.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (3)