FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Reagent: TA_cDNA
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General Information
Name
TA_cDNA
Species
D. melanogaster
Reagent type
FlyBase ID
FBlc0000033
Project
Created by
[BDGP: cDNA & EST FAQ](http://www.fruitfly.org/EST/faq.html)
Vector
Title
cDNA library of D. melanogaster, iso-1 strain, adult.
Accessions
    Overview
    Description

    Cloned cDNAs prepared from polyadenylated RNA isolated from adults of both sexes.

    Available from
    Biosample Source
    Overview
    Sex
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    Sample preparation

    The TA (Total Adult) cDNA library was made by Mark Stapleton and Charles Yu from mixed male and female adults of the isogenic y; cn bw sp (iso-1) strain.

    Biosamples used (1)
    Biosample
    Type
    Title
    D. melanogaster, iso-1 strain, adult, source for cDNA.
    Reagent Details
    Molecular Construct used
    Protocol

    Total RNA was processed with CIP and TAP in order to ligate an RNA adapter (RLM oligo: GCUGAUGGCGAUGAAUGAACACUGCGUUUGCUGGCUUUGAUGAAA) to decapped mRNA using T4 RNA ligase. This processing step is similar to the preparation of RNAfor 5' RACE. Components of the FirstChoice RLM-RACE Kit (Ambion) were used in this processing step. mRNA was then isolated using the PolyAPurist Mag isolation system (Ambion). First strand synthesis was carried out using PowerScript Reverse Transcriptase and an oligo dT primer adapter (5'-ATTCTAGAGGCCGAGGCGGCCGACATG-d(T)30VN-3') from the Creator cDNA Library Construction kit (Clontech). Second Strand synthesis was carried out with Advantage 2 enzyme using 5 cycles of PCR with the first strand primer and a primer that anneals within the RLM oligo (AGTCGGCCTTGTCGGCCCTGCGTTTGCTGGCTTTGATG). Double-stranded cDNA was digested with SfiI and ds-cDNA > 200bp was purified using the Gene Clean Gel Extraction Kit (BioRad). Purified cDNA was then directionally ligated into the DraIII digested pOTB7D vector. cDNAs were transformed into DH5-alpha.

    Mode of Assay
    Data analysis
    Comments
    Associated Data
    Size
    Associated features
    36 Clone(s)
    Files
    Additional Information
    Synonyms and Secondary IDs (3)
    Reported As
    Symbol Synonym
    TA
    TA_cDNA
    Name Synonyms
    cDNA library of D. melanogaster, iso-1 strain, adult.
    Secondary FlyBase IDs
      References (1)