FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Assay: ChIP-Seq_mE5069_CTCF_E16
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General Information
Name
ChIP-Seq_mE5069_CTCF_E16
Species
D. melanogaster
Assay type
ChIP-Seq
FlyBase ID
FBlc0002172
Project
Data Provider
Title
ChIP-Seq of CTCF in D. melanogaster, embryo (14-16 hr AEL).
Accessions
Biosample Source
Overview
Strain
Oregon-R-modENCODE
(modENCODE Data Coordination Center et al., 2012)
Stage
late embryonic stage
(modENCODE Data Coordination Center et al., 2012)
Sex
Tissue isolated
organism
(modENCODE Data Coordination Center et al., 2012)
Other tissues studied
Cell component
Cell line
Key genes
Methods
Sample preparation
Biosamples used (1)
Biosample
Type
Title
BS_mE5069
whole organism
D. melanogaster, embryo (14-16 hr AEL), source for ChIP.
Assay Details
Methods
Illumina sequencing
(modENCODE Data Coordination Center et al., 2012)
single-end layout
(modENCODE Data Coordination Center et al., 2012)
Key genes
(bait_protein)
Protocol

A rabbit polyclonal anti-CTCF (Bartkuhn lab) antibody was used for ChIP.

(modENCODE Data Coordination Center et al., 2012)
Mode of Assay
Comments
Associated Data
Size
Files
Additional Information
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
ChIP-Seq_mE5069_CTCF_E16
modENCODE_5069
Name Synonyms
ChIP-Seq of CTCF in D. melanogaster, embryo (14-16 hr AEL).
(modENCODE Data Coordination Center et al., 2012)
Secondary FlyBase IDs
    References (2)