Tools
Tools Overview & Help
Query by symbols/IDs
Batch Download
Sequence Downloader
ID Validator
Feature Mapper
Search/Browse Portals
QuickSearch
Vocabularies
QueryBuilder
CytoSearch
Sequenced Species
Interactions Browser
ImageBrowse
Genomics Tools
BLAST
BLAST @ Alliance
JBrowse
JBrowse2 (beta)
CytoSearch
Feature Mapper
Chromosome Maps
Synteny Table
Coordinates Converter
Sequence Downloader
modENCODE RNA-Seq
Overview
RNA-Seq Similarity
RNA-Seq Profile
RNA-Seq By Region
JBrowse
JBrowse2 (beta)
Submit Data
Fast-Track Your Paper
Submit Personal Communication
Feedback on Gene Snapshots
Downloads
Overview
Current Release
Archived Data
Map Conversion
Releases (FTP)
Links
External Resources
Model Organisms (MODs)
Alliance of Genome Resources
BeeBase
DictyBase
EcoCyc
Gramene
MGI
PomBase
Pseudobase
RGD
SGD
TAIR
VectorBase
WormBase
Xenbase
ZFIN
Stock Collections
Bloomington Drosophila Stock Center (BDSC)
FlyORF
Korea Drosophila Resource Center (KDRC)
Kyoto Stock Center
NIG-FLY
Tsinghua Fly Center (THFC)
Vienna Drosophila Resource Center (VDRC)
BDGP
DGRC
DRSC/TRiP
DIS by issue
FlyBook
FlyExpress
Interactive Fly
Virtual Fly Brain
FlyCyc
Community
Fast-Track Your Paper
FlyBase Community
Advisory Group
Fly Lab List
Recent Papers With
Technical Advances
Gene Snapshots
FlyBase Forum
Newsletter
FlySlack Community
Mastodon
Bluesky
X (formerly Twitter)
Fly Board
NIH Funding
About
Release Notes
New In This Release
Release Schedule
FlyBase Positions
Citing FlyBase
FlyBase Licensing
FlyBase Consortium
FlyBase Publications
FlyBase Presentations
Grants Supporting FlyBase
Help
Contact FlyBase
FlyBase Wiki:
Help Index
Tool help
Report help
FlyBase FAQ
Info for Authors
Author guidelines
Citing FlyBase
Fast-Track Your Paper Help
Gene Snapshots
Personal communications
Linking to/from FlyBase
Nomenclature
Curation documentation
Controlled Vocabularies in FlyBase
Gene Model Annotation
Gene Ontology (GO) Annotation
Nontraditional alleles
Vectors & Constructs
New to Flies?
Video Tutorials
Programmatic Access
to FlyBase: APIs, etc.
Kathy Matthews BDSC Endowment
Using AI to get FlyBase data
FlyBase in AWS Open Data
Previous
Next
FB2026_03
,
released September 17, 2026
Sign In
Tools
Tools Overview & Help
Query by symbols/IDs
Batch Download
Sequence Downloader
ID Validator
Feature Mapper
Search/Browse Portals
QuickSearch
Vocabularies
QueryBuilder
CytoSearch
Sequenced Species
Interactions Browser
ImageBrowse
Genomics Tools
BLAST
BLAST @ Alliance
JBrowse
JBrowse2 (beta)
CytoSearch
Feature Mapper
Chromosome Maps
Synteny Table
Coordinates Converter
Sequence Downloader
modENCODE RNA-Seq
Overview
RNA-Seq Similarity
RNA-Seq Profile
RNA-Seq By Region
JBrowse
JBrowse2 (beta)
Submit Data
Fast-Track Your Paper
Submit Personal Communication
Feedback on Gene Snapshots
Downloads
Overview
Current Release
Archived Data
Map Conversion
Releases (FTP)
Links
External Resources
Model Organisms (MODs)
Alliance of Genome Resources
BeeBase
DictyBase
EcoCyc
Gramene
MGI
PomBase
Pseudobase
RGD
SGD
TAIR
VectorBase
WormBase
Xenbase
ZFIN
Stock Collections
Bloomington Drosophila Stock Center (BDSC)
FlyORF
Korea Drosophila Resource Center (KDRC)
Kyoto Stock Center
NIG-FLY
Tsinghua Fly Center (THFC)
Vienna Drosophila Resource Center (VDRC)
BDGP
DGRC
DRSC/TRiP
DIS by issue
FlyBook
FlyExpress
Interactive Fly
Virtual Fly Brain
FlyCyc
Community
Fast-Track Your Paper
FlyBase Community
Advisory Group
Fly Lab List
Recent Papers With
Technical Advances
Gene Snapshots
FlyBase Forum
Newsletter
FlySlack Community
Mastodon
Bluesky
X (formerly Twitter)
Fly Board
NIH Funding
About
Release Notes
New In This Release
Release Schedule
FlyBase Positions
Citing FlyBase
FlyBase Licensing
FlyBase Consortium
FlyBase Publications
FlyBase Presentations
Grants Supporting FlyBase
Help
Contact FlyBase
FlyBase Wiki:
Help Index
Tool help
Report help
FlyBase FAQ
Info for Authors
Author guidelines
Citing FlyBase
Fast-Track Your Paper Help
Gene Snapshots
Personal communications
Linking to/from FlyBase
Nomenclature
Curation documentation
Controlled Vocabularies in FlyBase
Gene Model Annotation
Gene Ontology (GO) Annotation
Nontraditional alleles
Vectors & Constructs
New to Flies?
Video Tutorials
Programmatic Access
to FlyBase: APIs, etc.
Kathy Matthews BDSC Endowment
Using AI to get FlyBase data
FlyBase in AWS Open Data
Previous
Next
FB2026_03
,
released September 17, 2026
Assay: microRNA-Seq_FlyAtlas2_Adult_Female_Midgut
J2G
Search
Go
Open
Close
General Information
Name
microRNA-Seq_FlyAtlas2_Adult_Female_Midgut
Species
D. melanogaster
Assay type
short RNA-Seq
FlyBase ID
FBlc0003586
Project
FlyAtlas2
Data Provider
Title
micro RNA-Seq of D. melanogaster, Canton-S strain, adult female (7 days), midgut.
Accessions
ERX2172906
ERX2172904
ERX2172905
Biosample Source
Overview
Strain
Canton-S
(
Leader et al., 2018
)
Stage
adult stage
(
Leader et al., 2018
)
Sex
female
(
Leader et al., 2018
)
Tissue isolated
adult midgut
(
Leader et al., 2018
)
Other tissues studied
Cell component
Cell line
Key genes
Methods
light-dark cycle
(
Leader et al., 2018
)
Sample preparation
Biosamples used (1)
Export to HitList
Biosample
Type
Title
BS_FlyAtlas2_Adult_Female_Midgut
tissue
D. melanogaster, Canton-S strain, adult female (7 days), midgut, source for RNA.
Assay Details
Methods
total RNA isolation
(
Leader et al., 2018
)
Illumina sequencing
(
Leader et al., 2018
)
Key genes
Protocol
Mode of Assay
Comments
Associated Data
Size
Files
Additional Information
Related Datasets
Parent projects (1)
Export to HitList
Project
Type
Title
FlyAtlas2
transcriptome
FlyAtlas 2- a new version of the Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data.
Processed data generated from this assay (2)
Export to HitList
Result
Type
Title
microRNA-Seq_Profile_FlyAtlas2_Adult_Female_Midgut
RNA-seq profile
micro RNA-Seq profile of D. melanogaster, Canton-S strain, adult female (7 days), midgut.
microRNA-Seq_TPM_FlyAtlas2_Adult_Female_Midgut
gene expression profile
micro RNA-Seq TPM values of D. melanogaster, Canton-S strain, adult female, midgut.
Other assays (via shared biosamples) (1)
Export to HitList
Result
Type
Title
RNA-Seq_FlyAtlas2_Adult_Female_Midgut
RNA-Seq
RNA-Seq of D. melanogaster, Canton-S strain, adult female (7 days), midgut.
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
Fmg
(
Leader et al., 2018
)
microRNA-Seq_FlyAtlas2_Adult_Female_Midgut
Name Synonyms
micro RNA-Seq of D. melanogaster, Canton-S strain, adult female (7 days), midgut.
(
Leader et al., 2018
)
Secondary FlyBase IDs
References (1)
Report Sections
Open
Close
General Information
Biosample Source
Assay Details
Associated Data
Related Datasets
Synonyms and Secondary IDs
References