FB2026_03 , released September 17, 2026
Result: scRNAseq_2022_FCA_FEMALE_MALPTUB_seq_clustering
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General Information
Name
scRNAseq_2022_FCA_FEMALE_MALPTUB_seq_clustering
Species
D. melanogaster
Result type
cell clustering analysis
FlyBase ID
FBlc0004051
Project
Data Provider
Title
Clustering analysis of cells from 5-days old female Malpighian tubules
Status
Current
Accessions
    Biosample Source
    Overview
    Strain
    Stage
    adult stage
    (Li et al., 2022)
    Sex
    female
    (Li et al., 2022)
    Tissue isolated
    adult Malpighian tubule
    (Li et al., 2022)
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    multi-individual sample
    (Li et al., 2022)
    tissue dissection
    (Li et al., 2022)
    Sample preparation

    Single-nuclei suspensions were prepared from the Malpighian tubules of 300 5-days old female flies.

    Biosamples analyzed by this result (1)
    Biosample
    Type
    Title
    scRNAseq_2022_FCA_FEMALE_MALPTUB
    isolated nuclei
    Cells from 5-days old female Malpighian tubules
    Data Analyzed
    Assay
    single-nucleus RNA-Seq
    (Li et al., 2022)
    Assay methods
    10x sequencing
    (Li et al., 2022)
    Illumina sequencing
    (Li et al., 2022)
    Key genes
    Protocol
    Mode of Assay
    Raw Data Analyzed (1)
    Assay / Reagent collection
    Type
    Title
    scRNAseq_2022_FCA_FEMALE_MALPTUB_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old female Malpighian tubules
    Processed Data Analyzed (0)
    Result
    Type
    Title
    Analysis
    Methods
    EMBL-EBI SCEA standard analysis method
    (Li et al., 2022)
    Reference Genome
    Reference Annotation

    Dmel R6.32

    (Li et al., 2022)
    Data analysis
    Comments
    Associated Data
    Size
    7317 cells
    (Li et al., 2022)
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2022_FCA_FEMALE_MALPTUB_seq_clustering
    Name Synonyms
    Clustering analysis of cells from 5-days old female Malpighian tubules
    (Li et al., 2022)
    Secondary FlyBase IDs
      References (1)