FB2026_03 , released September 17, 2026
Result: scRNAseq_2022_FCA_MALE_FULL_seq_clustering
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General Information
Name
scRNAseq_2022_FCA_MALE_FULL_seq_clustering
Species
D. melanogaster
Result type
cell clustering analysis
FlyBase ID
FBlc0004624
Project
Data Provider
Title
Clustering analysis of male adult cells from all samples
Status
Current
Accessions
    Biosample Source
    Overview
    Strain
    Stage
    adult stage
    (Li et al., 2022)
    Sex
    male
    (Li et al., 2022)
    Tissue isolated
    male reproductive system
    (Li et al., 2022)
    adult Malpighian tubule
    (Li et al., 2022)
    adult
    (Li et al., 2022)
    adult oenocyte
    (Li et al., 2022)
    adult corpus cardiacum
    (Li et al., 2022)
    testis
    (Li et al., 2022)
    adult dorsal vessel
    (Li et al., 2022)
    adult tracheal system
    (Li et al., 2022)
    adult fat body
    (Li et al., 2022)
    leg
    (Li et al., 2022)
    adult pars intercerebralis
    (Li et al., 2022)
    antenna
    (Li et al., 2022)
    wing
    (Li et al., 2022)
    haltere
    (Li et al., 2022)
    adult head
    (Li et al., 2022)
    proboscis
    (Li et al., 2022)
    adult gut
    (Li et al., 2022)
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    multi-individual sample
    (Li et al., 2022)
    cell isolation
    (Li et al., 2022)
    tissue dissection
    (Li et al., 2022)
    Sample preparation

    Single-nuclei suspensions were prepared from the heads of 100 5-days old male flies.

    Biosamples analyzed by this result (18)
    Biosample
    Type
    Title
    scRNAseq_2022_FCA_MALE_ANT
    isolated nuclei
    Cells from 5-days old male antennas
    scRNAseq_2022_FCA_MALE_BODY
    isolated nuclei
    Cells from 5-days old male bodies
    scRNAseq_2022_FCA_MALE_FATB
    isolated nuclei
    Cells from 5-days old male fat bodies
    scRNAseq_2022_FCA_MALE_GUT
    isolated nuclei
    Cells from 5-days old guts
    scRNAseq_2022_FCA_MALE_HALTERE
    isolated nuclei
    Cells from 5-days old male halteres
    scRNAseq_2022_FCA_MALE_HEAD
    isolated nuclei
    Cells from 5-days old male heads
    scRNAseq_2022_FCA_MALE_HEART
    isolated nuclei
    Cells from 5-days old dorsal vessels
    scRNAseq_2022_FCA_MALE_LEG
    isolated nuclei
    Cells from 5-days old male legs
    scRNAseq_2022_FCA_MALE_REPRO
    isolated nuclei
    Cells from 2-days old male reproductive glands
    scRNAseq_2022_FCA_MALE_WALL
    isolated nuclei
    Cells from 5-days old male body walls
    Showing 10 / 18 records. Use Export to HitList above to see all
    Data Analyzed
    Assay
    single-nucleus RNA-Seq
    (Li et al., 2022)
    Assay methods
    Illumina sequencing
    (Li et al., 2022)
    10x sequencing
    (Li et al., 2022)
    Smart-seq2
    (Li et al., 2022)
    Key genes
    Protocol
    Mode of Assay
    Raw Data Analyzed (18)
    Assay / Reagent collection
    Type
    Title
    scRNAseq_2022_FCA_MALE_ANT_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male antennas
    scRNAseq_2022_FCA_MALE_BODY_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male bodies
    scRNAseq_2022_FCA_MALE_FATB_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male fat bodies
    scRNAseq_2022_FCA_MALE_GUT_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old guts
    scRNAseq_2022_FCA_MALE_HALTERE_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male halteres
    scRNAseq_2022_FCA_MALE_HEAD_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male heads
    scRNAseq_2022_FCA_MALE_HEART_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old dorsal vessels
    scRNAseq_2022_FCA_MALE_LEG_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male legs
    scRNAseq_2022_FCA_MALE_REPRO_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 2-days old male reproductive glands
    scRNAseq_2022_FCA_MALE_WALL_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old male body walls
    Showing 10 / 18 records. Use Export to HitList above to see all
    Processed Data Analyzed (0)
    Result
    Type
    Title
    Analysis
    Methods
    EMBL-EBI SCEA standard analysis method
    (Li et al., 2022)
    Reference Genome
    Reference Annotation

    Dmel R6.32

    (Li et al., 2022)
    Data analysis
    Comments
    Associated Data
    Size
    308426 cells
    (Li et al., 2022)
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2022_FCA_MALE_FULL_seq_clustering
    Name Synonyms
    Clustering analysis of male adult cells from all samples
    (Li et al., 2022)
    Secondary FlyBase IDs
      References (1)