FB2026_03 , released September 17, 2026
Result: scRNAseq_2022_FCA_MIXED_FULL_seq_clustering
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General Information
Name
scRNAseq_2022_FCA_MIXED_FULL_seq_clustering
Species
D. melanogaster
Result type
cell clustering analysis
FlyBase ID
FBlc0005151
Project
Data Provider
Title
Clustering analysis of adult cells from all samples
Status
Current
Accessions
    Biosample Source
    Overview
    Strain
    Stage
    adult stage
    (Li et al., 2022)
    Sex
    Tissue isolated
    adult gut
    (Li et al., 2022)
    ovary
    (Li et al., 2022)
    adult dorsal vessel
    (Li et al., 2022)
    wing
    (Li et al., 2022)
    adult
    (Li et al., 2022)
    adult corpus cardiacum
    (Li et al., 2022)
    proboscis
    (Li et al., 2022)
    adult pars intercerebralis
    (Li et al., 2022)
    adult abdomen
    (Li et al., 2022)
    haltere
    (Li et al., 2022)
    adult tracheal system
    (Li et al., 2022)
    adult head
    (Li et al., 2022)
    antenna
    (Li et al., 2022)
    adult fat body
    (Li et al., 2022)
    adult Malpighian tubule
    (Li et al., 2022)
    testis
    (Li et al., 2022)
    male reproductive system
    (Li et al., 2022)
    leg
    (Li et al., 2022)
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    cell isolation
    (Li et al., 2022)
    tissue dissection
    (Li et al., 2022)
    multi-individual sample
    (Li et al., 2022)
    Sample preparation

    Single-nuclei suspensions were prepared from the heads of 200 5-days old female and male flies.

    Biosamples analyzed by this result (19)
    Biosample
    Type
    Title
    scRNAseq_2022_FCA_MIXED_ANT
    isolated nuclei
    Cells from 5-days old antennas
    scRNAseq_2022_FCA_MIXED_BODY
    isolated nuclei
    Cells from 5-days old bodies
    scRNAseq_2022_FCA_MIXED_FATB
    isolated nuclei
    Cells from 5-days old fat bodies
    scRNAseq_2022_FCA_MIXED_GUT
    isolated nuclei
    Cells from 5-days old guts
    scRNAseq_2022_FCA_MIXED_HALTERE
    isolated nuclei
    Cells from 5-days old halteres
    scRNAseq_2022_FCA_MIXED_HEAD
    isolated nuclei
    Cells from 5-days old heads
    scRNAseq_2022_FCA_MIXED_HEART
    isolated nuclei
    Cells from 5-days old dorsal vessels
    scRNAseq_2022_FCA_MIXED_LEG
    isolated nuclei
    Cells from 5-days old legs
    scRNAseq_2022_FCA_MIXED_REPRO
    isolated nuclei
    Cells from 2-days old male reproductive glands
    scRNAseq_2022_FCA_MIXED_WALL
    isolated nuclei
    Cells from 5-days old body walls
    Showing 10 / 19 records. Use Export to HitList above to see all
    Data Analyzed
    Assay
    single-nucleus RNA-Seq
    (Li et al., 2022)
    Assay methods
    10x sequencing
    (Li et al., 2022)
    Illumina sequencing
    (Li et al., 2022)
    Smart-seq2
    (Li et al., 2022)
    Key genes
    Protocol
    Mode of Assay
    Raw Data Analyzed (19)
    Assay / Reagent collection
    Type
    Title
    scRNAseq_2022_FCA_MIXED_ANT_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old antennas
    scRNAseq_2022_FCA_MIXED_BODY_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old bodies
    scRNAseq_2022_FCA_MIXED_FATB_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old fat bodies
    scRNAseq_2022_FCA_MIXED_GUT_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old guts
    scRNAseq_2022_FCA_MIXED_HALTERE_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old halteres
    scRNAseq_2022_FCA_MIXED_HEAD_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old heads
    scRNAseq_2022_FCA_MIXED_HEART_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old dorsal vessels
    scRNAseq_2022_FCA_MIXED_LEG_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old legs
    scRNAseq_2022_FCA_MIXED_REPRO_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 2-days old male reproductive glands
    scRNAseq_2022_FCA_MIXED_WALL_seq
    single-nucleus RNA-Seq
    Single-nucleus RNA-seq of cells from 5-days old body walls
    Showing 10 / 19 records. Use Export to HitList above to see all
    Processed Data Analyzed (0)
    Result
    Type
    Title
    Analysis
    Methods
    EMBL-EBI SCEA standard analysis method
    (Li et al., 2022)
    Reference Genome
    Reference Annotation

    Dmel R6.32

    (Li et al., 2022)
    Data analysis
    Comments
    Associated Data
    Size
    529010 cells
    (Li et al., 2022)
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2022_FCA_MIXED_FULL_seq_clustering
    Name Synonyms
    Clustering analysis of adult cells from all samples
    (Li et al., 2022)
    Secondary FlyBase IDs
      References (1)