FB2026_03 , released September 17, 2026
Result: scRNAseq_2021_Mokashi_ETH_FEMALE_seq_clustering
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General Information
Name
scRNAseq_2021_Mokashi_ETH_FEMALE_seq_clustering
Species
D. melanogaster
Result type
cell clustering analysis
FlyBase ID
FBlc0005470
Project
Data Provider
Title
Clustering analysis of dissociated cells from female adult brains upon developmental alcohol exposure
Status
Current
Accessions
    Biosample Source
    Overview
    Strain
    Canton-S
    (Mokashi et al., 2021)
    Stage
    adult stage
    (Mokashi et al., 2021)
    Sex
    female
    (Mokashi et al., 2021)
    Tissue isolated
    brain
    (Mokashi et al., 2021)
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    tissue dissection
    (Mokashi et al., 2021)
    chemical treatment
    (Mokashi et al., 2021)
    multi-individual sample
    (Mokashi et al., 2021)
    Sample preparation

    Eggs were collected and placed on cornmeal-agar-molasses medium containing 10% (v/v/) ethanol. After eclosion, adult flies were transferred to fresh medium without alcohol and allowed to age for 3 to 5 days. Brains were then dissociated with collagenase and stepwise trituration.

    Biosamples analyzed by this result (1)
    Biosample
    Type
    Title
    scRNAseq_2021_Mokashi_ETH_FEMALE
    isolated cells
    Dissociated cells from female adult brains upon developmental alcohol exposure
    Data Analyzed
    Assay
    single-cell RNA-Seq
    (Mokashi et al., 2021)
    Assay methods
    10x sequencing
    (Mokashi et al., 2021)
    Key genes
    Protocol
    Mode of Assay
    Raw Data Analyzed (1)
    Assay / Reagent collection
    Type
    Title
    scRNAseq_2021_Mokashi_ETH_FEMALE_seq
    single-cell RNA-Seq
    Single-cell RNA-seq of dissociated cells from female adult brains upon developmental alcohol exposure
    Processed Data Analyzed (0)
    Result
    Type
    Title
    Analysis
    Methods
    EMBL-EBI SCEA standard analysis method
    (Mokashi et al., 2021)
    Reference Genome
    Reference Annotation

    Dmel R6.32

    (Mokashi et al., 2021)
    Data analysis
    Comments
    Associated Data
    Size
    18029 cells
    (Mokashi et al., 2021)
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2021_Mokashi_ETH_FEMALE_seq_clustering
    Name Synonyms
    Clustering analysis of dissociated cells from female adult brains upon developmental alcohol exposure
    (Mokashi et al., 2021)
    Secondary FlyBase IDs
      References (1)