FB2026_03 , released September 17, 2026
Assay: scRNAseq_2020_Kurmangaliyev_DGRP_seq
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General Information
Name
scRNAseq_2020_Kurmangaliyev_DGRP_seq
Species
D. melanogaster
Assay type
single-cell RNA-Seq
FlyBase ID
FBlc0006241
Project
Data Provider
Title
Single-cell RNA-seq of dissociated cells from pupal optic lobes of DGRP flies
Accessions
    Biosample Source
    Overview
    Strain
    Stage
    pupal stage
    (Kurmangaliyev et al., 2020)
    Sex
    female
    (Kurmangaliyev et al., 2020)
    Tissue isolated
    adult optic lobe
    (Kurmangaliyev et al., 2020)
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Methods
    multi-individual sample
    (Kurmangaliyev et al., 2020)
    tissue dissection
    (Kurmangaliyev et al., 2020)
    Sample preparation

    Pupae from w1118 virgin females crossed with 35 isogenic wild-type strains from the DGRP collection were collected at various time points between 12h and 96h after puparium formation. Brain tissue was incubated in papain and Liberase protease and mechanically dissociated.

    Biosamples used (1)
    Biosample
    Type
    Title
    scRNAseq_2020_Kurmangaliyev_DGRP
    isolated cells
    Dissociated cells from pupal optic lobes of DGRP flies
    Assay Details
    Methods
    10x sequencing
    (Kurmangaliyev et al., 2020)
    Key genes
    Protocol
    Mode of Assay
    Comments
    Associated Data
    Size
    1522007941 reads
    (Kurmangaliyev et al., 2020)
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2020_Kurmangaliyev_DGRP_seq
    Name Synonyms
    Single-cell RNA-seq of dissociated cells from pupal optic lobes of DGRP flies
    (Kurmangaliyev et al., 2020)
    Secondary FlyBase IDs
      References (1)