FB2026_03 , released September 17, 2026
Assay: scRNAseq_2022_Calderon_hrs0204_seq
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General Information
Name
scRNAseq_2022_Calderon_hrs0204_seq
Species
D. melanogaster
Assay type
FlyBase ID
FBlc0007822
Project
Data Provider
Title
Single-nucleus RNA-seq of dissociated cells from 2 to 4-hours old embryos
Accessions
    Biosample Source
    Overview
    Sex
    Tissue isolated
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Sample preparation

    Wild-type embryos from Canton S flies were laid on apple-agar plates in two-hour or four-hour windows, left to age for the specified time window, then collected from the plates, cleaned and dechorionated. Embryos were dissociated in ice-cold hypotonic lysis buffer with a Dounce homogenizer, filtered through a cell strainer, and nuclei were cross-linked on ice for 30 minutes.

    Biosamples used (1)
    Biosample
    Type
    Title
    Dissociated cells from 2 to 4-hours old embryos
    Assay Details
    Key genes
    Protocol
    Mode of Assay
    Comments
    Associated Data
    Size
    12709752 reads
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2022_Calderon_hrs0204_seq
    Name Synonyms
    Single-nucleus RNA-seq of dissociated cells from 2 to 4-hours old embryos
    Secondary FlyBase IDs
      References (1)