Gene or accession: CG1388
Gene annotation error
Gene CG1388 corresponds to AF199466 (FBgn0026323)
Comments: Tak1 (FBgn0026323, AF199466) corresponds to CG1388 (FBgn0031120) and
NOT to CG6890 (as currently annotated).
See separate accompanying e-mail from me for alignment of Tak1 and CG1388.
Subject: Re: FlyBase error report Tak1
Here is the alignment of Tak1 and CG1388..
Gillian
Pairwise Scores:
CLUSTAL W (1.8) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: AF199466 3349 bp
Sequence 2: CG1388|FBan0001388|CT3172|FBan 2971 bp
Start of Pairwise alignments
Aligning...
Sequences ( 1:2 ) Aligned. Score: 99
Guide tree file created:
/net/nfs0/vol1/production/w3nobody/tmp/8735955537038.dnd
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences: 2  Score:55933 
Alignment Score 21964
CLUSTAL-Alignment file created
/net/nfs0/vol1/production/w3nobody/tmp/8735955537038.aln
CLUSTAL W (1.8) multiple sequence alignment
AF199466
\-----------------CGGTCTTGTTAAATTATTAAAAAAAAAACAAGT 33
CG1388|FBan0001388|CT3172|FBan
CACTAATGTATCGATGACGGTCTTGTTAAATTATTAAAAAAAAAACAAGT 50
AF199466
TTGTACTTGAAAAGTACGGCGTATATCTACAGCGAAGAACGCAAGAACCC 83
CG1388|FBan0001388|CT3172|FBan
TTGTACTTGAAAAGTACGGCGTATATCTACAGCGAAGAACGCAAGAACCC 100
AF199466
GCCAAGGCAGCGTCCGATGCAGACGCCATCTGTTCAAGCATTGAGCCCGG 133
CG1388|FBan0001388|CT3172|FBan
GCCAAGGCAGCGTCCGATGCAGACGCCATCTGTTCAAGCATTGAGCCCGG 150
AF199466
AATCCGGAGGAATCCCGGCCAGGATGTGATGTGCGCACTGGGCCCTCTCC 183
CG1388|FBan0001388|CT3172|FBan
AATCCGGAGGAATCCCGGCCAGGATGTGATGTGCGCACTGGGCCCTCTCC 200
AF199466
GCTGGTCGATATAAACTCGTGCCCCCCTCTTCTAGCCACCTTCTTGCTGT 233
CG1388|FBan0001388|CT3172|FBan
GCTGGTCGATATAAACTCGTGCCCCCCTCTTCTAGCCACCTTCTTGCTGT 250
AF199466
CAACCGCCTGCTCATTCTACCCCACAGTTCCAGTCCCAGTCCTGCACAGC 283
CG1388|FBan0001388|CT3172|FBan
CAACCGCCTGCTCATTCTACCCCACAGTTCCAGTCCCAGTCCTGCACAGC 300
AF199466
AATCATC---GCCTGGTGAAGTCTACCGGTAGCACGAGTGGTGGAACCAG 330
CG1388|FBan0001388|CT3172|FBan
AATCATCTTCGCCTGGAGAAGTCTACCGGTAGCACGAGTGGTGGAACCAG 350
AF199466
GCAGACTACAAAGGATACGGAGATCGCGGTGTCTGGGAAATCGGCTGAGC 380
CG1388|FBan0001388|CT3172|FBan
GCAGACTACAAAGGACACGGAGACCGCGGTGTCTGGGAAATCGGCTGAGC 400
AF199466
ACGGAAACCGATCCACTAGGGTTAGCATCACGCACCACTTTGTCCAGGAA 430
CG1388|FBan0001388|CT3172|FBan
ACGGAAACCGATCCACTAGGGTTGGCATCACGCACCACTTTGTCCAGGAA 450
AF199466
CCTGCAGCTGAGGAATCTAGATAACATCTGAAGTCTCCTGGGAACTGCGA 480
CG1388|FBan0001388|CT3172|FBan
CCTGCAGCTGAGGAATCTAGATAACATCTGAAGTCTCCTGGGAACTGCGA 500
AF199466
AACACACCATATCTTAGCAAAATGACGTGGTAAAAGTTGTCAGTCGCAAT 530
CG1388|FBan0001388|CT3172|FBan
AACACACCATATCTTAGCAAAATGACGTGGTAAAAGTTGTCAGTCGCAAT 550
AF199466
CTATACAAAGGCAAGAAACTTTATGATGAATCCAGGTCTAGATCTTGCAA 580
CG1388|FBan0001388|CT3172|FBan
CTATACAAAGGCAAGAAACTTTATGATGAATCCAGGTCTAGATCTTGCAA 600
AF199466
AGATTCCGAAAACTCTGTCCCCAAGAGGGAACCAAAGGCACAGTTAGCCA 630
CG1388|FBan0001388|CT3172|FBan
AGATTCCGAAAACTCTGTCCCCAAGAGGGAACCAAAGGCACAGTTAGCCA 650
AF199466
GCAATGAAATCGGGAACCCACGGAATCGTAGCCACTAAAAAAGGCGAAAT 680
CG1388|FBan0001388|CT3172|FBan
GCAATGAAATCGGGAACCCACGGAATCGTAGCCACTAAAAA-GGCGAAAT 699
AF199466
CCCGGTAATTCTACCAAAATAGCGCACCACCTGGACACCATAGAAGAGAG 730
CG1388|FBan0001388|CT3172|FBan
CCCGGTAATTCTACCAAAATAGCGCACCACCTGGACACCATAGAAGAGAG 749
AF199466
CCTTAAGGCAAGGAATCGGTGGCATACTTGGACAGTTGAAGAGAACTTTA 780
CG1388|FBan0001388|CT3172|FBan
CCTTAAGGCAAGGAATCGGTGGCATACTTGGACAGTTGAAGAGAACTTTA 799
AF199466
AATCTGGTAATCAGCGGCGCCAAATGCAACTGCAACTGGTAAACTAGTAC 830
CG1388|FBan0001388|CT3172|FBan
AATCTGGTAATCAGCGGCGCCAAATGCAACTGCAACTGGTAAACTAGTAC 849
AF199466
TCATTTGTAAGCCAAAACACTGACAAACAAAAGCTGCATCTGAAAAGCAA 880
CG1388|FBan0001388|CT3172|FBan
TCATTTGTAAGCCAAAACACTGACAAACAAAAGCTGCATCTGAAAAGCAA 899
AF199466
GTAGAGAACACCAGGATACTTAGCGTTCCACGGAGATGGCCACAGCATCG 930
CG1388|FBan0001388|CT3172|FBan
GTAGAGAACACCAGGATACTTAGCGTTCCACGGAGATGGCCACAGCATCG 949
AF199466
CTGGACGCACTGCAGGCAGCCTATGTGGACTTCAGTGAGATAACACTAAG 980
CG1388|FBan0001388|CT3172|FBan
CTGGACGCACTGCAGGCAGCCTATGTGGACTTCAGTGAGATAACACTAAG 999
AF199466
AGAGAAAGTCGGCCATGGGTCCTACGGTGTGGTCTGCAAGGCCGTTTGGC 1030
CG1388|FBan0001388|CT3172|FBan
AGAGAAAGTCGGCCATGGGTCCTACGGAGTGGTCTGCAAGGCCGTTTGGC 1049
AF199466
GCGACAAGCTGGTTGCCGTCAAGGAGTTCTTCGCCAGCGCCGAGCAGAAG 1080
CG1388|FBan0001388|CT3172|FBan
GCGACAAGCTGGTTGCCGTCAAGGAGTTCTTCGCCAGCGCCGAGCAGAAG 1099
AF199466
GACATCGAGAAGGAGGTGAAGCAGTTGTCGCGCGTGAAGCACCCGAACAT 1130
CG1388|FBan0001388|CT3172|FBan
GACATCGAGAAGGAGGTGAAGCAGTTGTCGCGCGTGAAGCACCCGAACAT 1149
AF199466
CATCGCTCTGCACGGGATATCCTCGTACCAGCAGGCCACCTACCTGATAA 1180
CG1388|FBan0001388|CT3172|FBan
CATCGCTCTGCACGGGATATCCTCGTACCAGCAGGCCACCTACCTGATAA 1199
AF199466
TGGAGTTCGCCGAAGGTGGATCGCTGCACAACTTCCTTCACGGCAAGGTG 1230
CG1388|FBan0001388|CT3172|FBan
TGGAGTTCGCCGAAGGTGGATCGCTGCACAACTTCCTTCACGGCAAGGTG 1249
AF199466
AAGCCGGCATATTCTCTGGCCCACGCCATGAGCTGGGCGCGCCAATGTGC 1280
CG1388|FBan0001388|CT3172|FBan
AAGCCGGCATATTCTCTGGCCCACGCCATGAGCTGGGCGCGCCAATGTGC 1299
AF199466
AGAGGGTCTGGCATATTTGCATGCCATGACGCCAAAACCACTAATACATC 1330
CG1388|FBan0001388|CT3172|FBan
AGAGGGTCTGGCATATTTGCATGCCATGACGCCAAAACCACTAATACATC 1349
AF199466
GCGACGTGAAGCCGCTGAACCTGCTCTTGACCAACAAGGGACGCAATCTG 1380
CG1388|FBan0001388|CT3172|FBan
GCGACGTGAAGCCGCTGAACCTGCTCTTGACCAACAAGGGACGCAATCTG 1399
AF199466
AAGATATGCGACTTCGGCACGGTGGCGGACAAGTCGACCATGATGACCAA 1430
CG1388|FBan0001388|CT3172|FBan
AAGATATGCGACTTCGGCACGGTGGCGGACAAGTCGACCATGATGACCAA 1449
AF199466
CAATCGCGGTAGTGCCGCTTGGATGGCGCCCGAGGTCTTCGAAGGCTCCA 1480
CG1388|FBan0001388|CT3172|FBan
CAATCGCGGCAGTGCCGCTTGGATGGCGCCCGAGGTCTTCGAAGGCTCCA 1499
AF199466
AGTATACGGAGAAGTGTGACATTTTCAGCTGGGCCATTGTTCTATGGGAG 1530
CG1388|FBan0001388|CT3172|FBan
AGTATACGGAGAAGTGTGACATTTTTAGCTGGGCCATTGTTCTATGGGAG 1549
AF199466
GTTCTGTCCAGGAAGCAGCCCTTTAAAGGCATCGACAATGCCTACACCAT 1580
CG1388|FBan0001388|CT3172|FBan
GTTCTGTCCAGGAAGCAGCCCTTTAAAGGCATCGACAATGCCTACACCAT 1599
AF199466
CCAGTGGAAGATCTACAAGGGTGAACGCCCGCCGCTGCTGACCACTTGCC 1630
CG1388|FBan0001388|CT3172|FBan
CCAGTGGAAGATCTACAAGGGTGAACGCCCGCCGCTGCTGACCACTTGCC 1649
AF199466
CCAAGCGCATCGAGGACCTGATGACCGCCTGCTGGAAAACGGTGCCCGAG 1680
CG1388|FBan0001388|CT3172|FBan
CCAAGCGCATCGAGGACCTGATGACCGCCTGCTGGAAAACGGTGCCCGAG 1699
AF199466
GATCGCCCGTCGATGCAGTACATAGTGGGCGTTATGCACGAGATCGTCAA 1730
CG1388|FBan0001388|CT3172|FBan
GATCGCCCGTCGATGCAGTACATAGTGGGCGTTATGCACGAGATCGTCAA 1749
AF199466
GGACTATACGGGGGCGGACAAGGCCCTGGAATACACATTTGTTAATCAAC 1780
CG1388|FBan0001388|CT3172|FBan
GGACTATACGGGGGCGGACAAGGCCCTGGAATACACGTTTGTTAATCAAC 1799
AF199466
AGATTGTCACCAAAGAGAGCGACGGCACGGTGGCCGCTCAACCGGATAGC 1830
CG1388|FBan0001388|CT3172|FBan
AGATTGTCACCAAAGAGAGCGACGGCACGGTGGCCGCTCAACCGGATAGC 1849
AF199466
CTCAGTTCGCAGGAGGGGGAACTGAGCCCCTCGTCCACACAGTTAACACC 1880
CG1388|FBan0001388|CT3172|FBan
CTCAGTTCGCAGGAGGGGGAACTGAGCCCCTCGTCCACACAGTTAACACC 1899
AF199466
GACAACGGCGGCCAACGCCAATGTGAACGCGATAGCAATATCAAAAACAA 1930
CG1388|FBan0001388|CT3172|FBan
GACAACGGCGGCCAACGCCAATGTGAACGCGATAGCAATATCAAAAACAA 1949
AF199466
CGACTAGCTCAATGACCGAAAATACCTCATCAACATCATCGGACATCACG 1980
CG1388|FBan0001388|CT3172|FBan
CGACTAGCTCAATGACCGAAAATACCTCATCAACATCATCGGACATCACG 1999
AF199466
CCGACGAACTCGGGCCAACTGGACAATAATCCGCTATTCTATATGGTCAC 2030
CG1388|FBan0001388|CT3172|FBan
CCGACGAACTCGGGCCAACTGGACAATAATCCGCTATTCTATATGGTCAC 2049
AF199466
CAATCGCTGGGACGCGATTCCCGAGGAGGAGAGCAACGAGAGCCGGAACG 2080
CG1388|FBan0001388|CT3172|FBan
CAATCGCTGGGACGCGATTCCCGAGGAGGAGAGCAACGAGAGCCGGAACG 2099
AF199466
ATAGCTTCAACCTCACCTCGTCGGCTGAGGCCACTCAGCGCCTCGAAACG 2130
CG1388|FBan0001388|CT3172|FBan
ATAGCTTCAACCTCACCTCGTCGGCTGAGGCCACTCAGCGCCTCGAAACG 2149
AF199466
ATCCGGAACGGCATGATCCTGATGGCCTGCAAGCCCATGGAGCAGCTCAC 2180
CG1388|FBan0001388|CT3172|FBan
ATCCGGAACGGCATGATCCTGATGGCCTGCAAGCCCATGGAGCAGCTCAC 2199
AF199466
CCTCGACGTGGAGGCGAATGGCTTTGATCTGAGTCCCAGCGAAAGCAGCA 2230
CG1388|FBan0001388|CT3172|FBan
CCTCGACGTGGAGGCGAATGGCTTTGATCTGAGTCCCAGCGAAAGCAGCA 2249
AF199466
GCAGCAGCACGAACGCAAAGAGCGATGGCCGCGAACGACTCACGGTGACG 2280
CG1388|FBan0001388|CT3172|FBan
GCAGCAGCACGAACGCAAAGAGCGATGGCCGCGAACGACTCACGGTGACG 2299
AF199466
GACACCAAGCCGGTGATGATGACCACGGATCTGTCCAACAACAACGGCGG 2330
CG1388|FBan0001388|CT3172|FBan
GACACCAAGCCGGTGATGATGACCACGGATCTGTCCAACAACAACGGCGG 2349
AF199466
CATCCACGCCCACTCGAACGGACTGCTGAGCCATGCGAATGGTTGGCAAG 2380
CG1388|FBan0001388|CT3172|FBan
CATCCACGCCCACTCGAACGGACTGCTGAGCCATGCGAATGGTTGGCAAG 2399
AF199466
CAAGAGATGAGGAGCTGCAGGAGCAAGAGCATGAGCAGGAGATTGTCAAC 2430
CG1388|FBan0001388|CT3172|FBan
CAAGAGATGAGGAGCTGCAGGAGCAAGAGCATGAGCAGGAGATTGTCAAC 2449
AF199466
TCGTTGGACGTCGACGTGGATCCCGACGAGGATGAGAACGACGGCACCGA 2480
CG1388|FBan0001388|CT3172|FBan
TCGTTGGACGTCGACGTGGATCCCGACGAGGATGAGAACGACGGCACCGA 2499
AF199466
ACAGTCACTGGCCGAGATTCTTGATCCGGAGCTCCAGCCAGAGCCGCCGA 2530
CG1388|FBan0001388|CT3172|FBan
ACAGTCACTGGCCGAGATTCTTGATCCGGAGCTCCAGCCAGAGCCGCCGA 2549
AF199466
TACCCAACGATGCCGAATCGCAGCTCATCTACCGGGACCACCGACACATG 2580
CG1388|FBan0001388|CT3172|FBan
TACCCAACGATGCCGAATCGCAGCTCATCTACCGGGACCACCGACACATG 2599
AF199466
GCCAAGGAGTACCTGAGCGTCGACACGAACCTCTACTACGCGCAGGACTT 2630
CG1388|FBan0001388|CT3172|FBan
GCCAAGGAGTACCTGAGCGTCGACACGAACCTCTACTACGCGCAGGACTT 2649
AF199466
CAAGGACAAGCTCATCGTGCAGATGGACCGAACCGAGCGCGAACAGAAGC 2680
CG1388|FBan0001388|CT3172|FBan
CAAGGACAAGCTCATCGTGCAGATGGACCGAACCGAGCGCGAACAGAAGC 2699
AF199466
AGGAGCTTCTGCGCAAGATGAAGGACAAGGAGGGTCTTCAGAGTCTTTAC 2730
CG1388|FBan0001388|CT3172|FBan
AGGAGCTTCTGCGCAAGATGAAGGACAAGGAGGGTCTTCAGAGTCTTTAC 2749
AF199466
AACAATCTGCAGCAGCAGTACGCTTCACGCCAACTTGCGGCCGGCCATCA 2780
CG1388|FBan0001388|CT3172|FBan
AACAATCTGCAGCAGCAGTACGCTTCACGCCAACTTGCGGCCGGCCATCA 2799
AF199466
TCCGCAACCTCATCCTCATCCGCATCCAAATCAGCTTCAGCATCCACACT 2830
CG1388|FBan0001388|CT3172|FBan
TCCGCAACCTCATCCTCATCCGCATCCAAATCAGCTTCAGCATCCACACT 2849
AF199466
CACATCCGCCTATGCATTTCCTGCAGGATGAGGGCTGTGGACTGCTGCCC 2880
CG1388|FBan0001388|CT3172|FBan
CACATCCGCCTATGCATTTCCTGCAGGATGAGGGCTGTGGACTGCTGCCC 2899
AF199466
GGATCGGTGTGCGGAGGCTCTGAGTCCGTGGAAGAAGGCTGGGTGGTCAT 2930
CG1388|FBan0001388|CT3172|FBan
GGATCGGTGTGCGGAGGCTCTGAGTCCGTGGAAGAAGGCTGGGTGGTCAT 2949
AF199466
CCCACCGCATCACAATGCGTAGTCTCGTGCGCTGCCGATTCGATCGATCG 2980
CG1388|FBan0001388|CT3172|FBan
CCCACCGCATCACAATGCGTAG---------------------------- 2971
AF199466
ACTCTCTATGTCTATAGGCTAGGACTCTACCTTTAATCCGCAATATGTAA 3030
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466
TATGTTATCTGTAATCTGTAATCCAATATTCGTAGTCTGTATCTGTACGA 3080
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466
TTAGCCATAGCACTTTGTTTATTTCTATATCTATGACTATTTCGTTGTAA 3130
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466
TCGTTTTTTGTTAAGTCTAAGCGTATTCAGTCCGTGTTTCTTTTAATTTA 3180
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466
GCGAACAATTGTTTCGATCCATTAGCAGTCTCGCAAGCTTCGTTTAGGTT 3230
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466
TTAATATTATGATTAAGCTTAAAACACACTTAGCATTAGCACATGTATCT 3280
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466
GTTCGAGGAAGCTGACAAGGAGTAGACCAAAAATATATAAAAACCATCGA 3330
CG1388|FBan0001388|CT3172|FBan
\--------------------------------------------------
AF199466 AAGCAACGACAAACAAAAA 3349
CG1388|FBan0001388|CT3172|FBan \-------------------