Gene or accession: CG15583
Gene annotation error
Gene CG15583 has incorrect exon/intron structure.
Comments: I think the first two exons need to be split off as a
separate odorant binding protein family gene. My coding cDNA is
ATGCAGTCCCAATCCCTCCTGCTGATCGTTGCAGCCGTTGCCACGTTTCTGGTGGCCCAGACTACGGCCAAGTTCCTGCT
GAAGGACCACGCCGACGCAGAGAAGGCGTTCGAGGAGTGCCGTGAGGACTACTACGTGCCGGACGACATCTACGAGAAGT
ACCTGAACTACGAGTTTCCCGCCCACCGGCGCACCAGCTGCTTCGTCAAGTGCTTCCTGGAGAAGCTTGAGCTGTTCTCG
GAGAAGAAGGGATTTGACGAGCGCGCCATGATCGCCCAGTTCACCTCCAAGAGCAGCAAAGACCTGTCCACGGTCCAGCA
CGGCCTGGAGAAGTGCATCGACCACAACGAGGCCGAGTCGGATGTCTGCACCTGGGCCAACCGAGTCTTCTCCTGCTGGC
TGCCCATCAACCGCCACGTGGTGCGTAAGGTCTTCGCC
The last exon is more complicated. It appears to have the coding
capacity for two odorant binding proteins, however they may be fused or
alternatively spliced. In either case there may be a 5' exon missing
that encodes a signal sequence characteristic of these proteins. My
coding cDNA for the first part is
ATGAGTTCCCCTCGTGCGGTTCTAGTCAGCCTGTTCCTGATCTGCAGTCAGGCACTAGCTGACCTTTCTGGTGATGCCCA
GACTCTGGAAAAGTGCCTGCGGCAACTTAGTTCGCCGGAGAGCATTGCTGGCGATCTTCGAAAGCTGGAACGGTATTCAT
CTTGGACGCGGGAGGAGGTACCTTGCCTGATGCGCTGCTTGGCCAGAGAAAAGGGCTGGTTCGACGTGGAGGAAAACAAG
TGGAGGCTCAAGCAACTGACTGAGGACCTGGGCGCCGATGTCTATAACTACTGCAGATTCGAGCTGCGCCGGATGGGGTC
CGATGGCTGCAGCTTCGCCTATCGGGGACTCAGGTGCCTGAAGCAGGCCGAGATGCATGCGGGCACCAGCCTGAGCACAC
TGCTACAGTGTTCCCGCCAGCTG
I don't know how to deal with the second part, perhaps you can annotate it as
an alternatively spliced product.