Gene or accession: CG18352
Release: 1
Gene annotation error
Gene CG18352 has a mistake in the supporting evidence or functional assignment.
Comments: CG18352 can be deleted from GadFly--it appears to be part of an X
transposable element.
Query= CG18352|FBgn0036130|CT41704|FBan0018352 GO:<up></up> located on: 3L
68A4-68A4; |cDNA sequence
(1590 letters)
Database: /data/blast/db/na_te.dros
55 sequences; 282,078 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High
Probability Sequences producing High-scoring Segment Pairs: Score
P(N) N
gb|AF237761|X-element ROXELEMENT 4740bp 7881 0.0
1 gb|X17551|Doc DMW1DOC 4725bp Derived from X17551 (g8821) ... 523 2.2e-17
1 gb|AC005734|Waldo-A WALDOA 5150bp 170 0.35
1
>gb|AF237761|X-element ROXELEMENT 4740bp
Length = 4740
Plus Strand HSPs:
Score = 7881 (1188.5 bits), Expect = 0.0, P = 0.0
Identities = 1583/1590 (99%), Positives = 1583/1590 (99%), Strand = Plus / Plus
Query: 1 ATGGATATGCCAATCACGCCGTTTGAACCCTGCGAGGTAGCCGAAGTCATTGTGCGCCAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3111 ATGGATATGCCAATCACGCCGTTTGAACCCTGCGAGGTAGCCGAAGTCATTGTGCGCCAG 3170
Query: 61 AGTAACAACAAAGCACCTGGACATGACGTTATCTGCAACGCCACATTGAAGGCCCTGCCC 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3171 AGTAACAACAAAGCACCTGGACATGACGTCATCTGCAACGCCACATTGAAGGCCCTGCCC 3230
Query: 121 AGACAAGCGATCCTCTACATAACGTTGGTTTTCAACGCTATTGTGAGGTTGCAATACTTC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3231 AGACAAGCGATCCTCTACATAACGTTGGTTTTCAACGCTATTGTGAGGTTGCAATACTTC 3290
Query: 181 CCTTATCAGTGGAAGCTCGGGATAATCTCCATGATCCACAAACCTGGCAAGCCGGAAAGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3291 CCTTATCAGTGGAAGCTCGGGATAATCTCCATGATCCACAAACCTGGCAAGCCGGAAAGG 3350
Query: 241 GAGCCCGCCTCCTACCGGCCGATCAGTCTCCTCCCTTCAATTTCGAAGGTGTTTGAGAGA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3351 GAGCCCGCCTCCTACCGGCCGATCAGTCTCCTCCCTTCAATTTCGAAGGTGTTTGAGAGA 3410
Query: 301 CTGATTGCTGTCCGGATTGTAAGGATTATGGAAGCCCAGGGGATTACCCCTGAGCACCAG 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3411 CTGATTGCTGTCCGGATTGTAAGCATTATGGAAGCCCAGGGGATTACCCCTGAGCACCAG 3470
Query: 361 TTCGGTTTCCGTGCTGGCCACTGTACTGTCGAGCAGCTCCATCGAGTCGTCGAGCAAATT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3471 TTCGGTTTCCGTGCTGGCCACTGTACTGTCGAGCAGCTCCATCGAGTCGTCGAGCAAATT 3530
Query: 421 CTGACTGCCTACGACAGTAAGGAATATTGTAACAGCCTCTTCTTGGACATTCGAGAAGCG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3531 CTGACTGCCTACGACAGTAAGGAATATTGTAACAGCCTCTTCTTGGACATTCGAGAAGCG 3590
Query: 481 TTTGATCGAGTGTGGCACATTGGACTCCAACTGAAAATCAAGCAGACGCTGCCTGCTCCA 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3591 TTTGATCGAGTGTGGCACATTGGACTCCAACTGAAAATCAAGCAGACGCTGCCTGCCCCA 3650
Query: 541 TATTTTGGGTTGCTGAAATCGTACCTGGAAGGAAGGAGGTTCGCTGTGCGCTTTCATTCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3651 TATTTTGGGTTGCTGAAATCGTACCTGGAAGGAAGGAGGTTCGCTGTGCGCTTTCATTCA 3710
Query: 601 GCAATTTCCACCGAGCACAACGTGGCAGCTGGTGTTCCACAAGGTAGTGTCCTCGGCCCC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3711 GCAATTTCCACCGAGCACAACGTGGCAGCTGGTGTTCCACAAGGTAGTGTCCTCGGCCCC 3770
Query: 661 CTGCTCTACTGCCTGTGTAGCCACGACATGCCGCAGCCAGATGTAAGCCTTTACGGGAAA 720
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3771 CTGCTCTACTGCCTGTATAGCCACGACATGCCGCAGCCAGATGTAAGCCTTTACGGGAAA 3830
Query: 721 TCTATGTTGGCCACATTTGCCGATGACGTGTGCGTCACCTACAGGTCCCGATGCGAGCAC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3831 TCTATGTTGGCCACATTTGCCGATGACGTGTGCGTCACCTACAGGTCCCGATGCGAGCAC 3890
Query: 781 GACGCAAGCCGATGGTATCCAGGACTTTGCATACCGGTTCTCGGAATGGGCAAGACGATG 840
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3891 GACGCA-GCCGATGGTATCCAGGACTTTGCATACCGGTTCTCGGAATGGGCAAGACGATG 3949
Query: 841 GAATATTGGCATCAATAGCAGTAAATCCAACAACGTCTGCTTCACTTTAAAGCGGAGAAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3950 GAATATTGGCATCAATAGCAGTAAATCCAACAACGTCTGCTTCACTTTAAAGCGGAGAAC 4009
Query: 901 GCCACCGCCCGTCTACATCGAGGAAGTCCCCGTACCACAGCCGAACGCAGCAAAGTACCT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4010 GCCACCGCCCGTCTACATCGAGGAAGTCCCCGTACCACAGCCGAACGCAGCAAAGTACCT 4069
Query: 961 TGGAGTGCTTCTGGATCGCAGACTCACATTTTCCAAGCATGTGACCGACATCAGAACGCG 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4070 TGGAGTGCTTCTGGATCGCAGACTCACATTTTCCAAGCATGTGACCGACATCAGAACGCG 4129
Query: 1021 CCTACGTGCTAAGGTGGCGAAGCACTACTGGCTACTTTCTTCGCGCAGTAAATTGTCGCT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4130 CCTACGTGCTAAGGTGGCGAAGCACTACTGGCTACTTTCTTCGCGCAGTAAATTGTCGCT 4189
Query: 1081 ATCCAACAAGCTGACAATTTACAAACAGATCCTAGCACCAAACTGGAAGTATGGGTGCCA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4190 ATCCAACAAGCTGACAATTTACAAACAGATCCTAGCACCAAACTGGAAGTATGGGTGCCA 4249
Query: 1141 AATCTGGGGCTTAGCCTGCGCCAGCCACATCAAAAGGATCCAGGCTATTCAAAATAAGGT 1200
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4250 AATCTGGGGCTTAGCCTGCGACAGCCACATCAAAAGGATCCAGGCTATTCAAAATAAGGT 4309
Query: 1201 AGCAAGACTCATCACCGGCTGCGAGTGGTTTGTTCGAAACACCACCCTGCACAGAGACCT 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4310 AGCAAGACTCATCACCGGCTGCGAGTGGTTTGTTCGAAACACCACCCTGCACAGAGACCT 4369
Query: 1261 GAAACTCGCAACGGTATTTGACGAAATAAACAAGCACTCGAGCAGATACCATGACAGGCT 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4370 GAAACTCGCAACGGTATTTGACGAAATAAACAAGCACTCGAGCAGATACCATGACAGGCT 4429
Query: 1321 GGAGCGCCACAGAAATCGGCTGGCCAGCGCTTTAAACAGATCTCGCCCACCAAGGAGGCT 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4430 GGAGCGCCACAGAAATCGGCTGGCCAGCGCTTTAAACAGATCTCGCCCACCAAGGAGGCT 4489
Query: 1381 CAATAGAAGGCAACCGAGGGATCTCATTACCCGATCTCCTTTGACAAGGGTCCGCAGAAG 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4490 CAATAGAAGGCAACCGAGGGATCTCATTACCCGATCTCCTTTGACAAGGGTCCGCAGAAG 4549
Query: 1441 CTGACGCTTATCTTAAATCCTATTTGTTATATGTGATTGTTATGTAATTGTAGTTAAATT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4550 CTGACGCTTATCTTAAATCCTATTTGTTATATGTGATTGTTATGTAATTGTAGTTAAATT 4609
Query: 1501 ACTGTAAATTTGAAAAAGCTAACTATAGTTAGCCGGCGAGCCCAAATGGGCTGAATTAAT 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4610 ACTGTAAATTTGAAAAAGCTAACTATAGTTAGCCGGCGAGCCCAAATGGGCTGAATTAAT 4669
Query: 1561 AGATAAGAAGGACACAAAGGGGATTCAAGA 1590
|||||||||||||||||||||| |||||||
Sbjct: 4670 AGATAAGAAGGACACAAAGGGGCTTCAAGA 4699