Gene or accession: CG17411
Release: 1
Gene annotation error
Gene CG17411 has a mistake in the supporting evidence or functional assignment.
Comments: CG17411 can be deleted from GadFly--it appears to be part of an
aurora element (just 67%
identity, but again over the whole length, so likely to be transposon sequence).
Query= CG17411|FBgn0040048|CT34126|FBan0017411 GO:<up></up> located on: U; |cDNA
sequence
(973 letters)
Database: /data/blast/db/na_te.dros
55 sequences; 282,078 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High
Probability Sequences producing High-scoring Segment Pairs: Score
P(N) N
gb|AB022762|aurora-element DMAURA 4263bp Derived from AB0... 1094 2.0e-76
2 Tinker Tinker 6112bp 193 0.020
1
>gb|AB022762|aurora-element DMAURA 4263bp Derived from AB022762 (d1268008)
(Rel. 59, Last updated, Version 1).
Length = 4263
Plus Strand HSPs:
Score = 1094 (170.2 bits), Expect = 2.0e-76, Sum P(2) = 2.0e-76
Identities = 376/559 (67%), Positives = 376/559 (67%), Strand = Plus / Plus
Query: 1 ATGTGCCACCAAAACGTGGAGGCCACCATCGGCGAGATTCGTCGAAAGTTTTGGATAACT 60
||| || ||||| ||||| || || |||| ||||| || || ||| ||| | ||
Sbjct: 2929 ATGAAGCATCAAAATGTGGATGCTACGATCGCGGAGATCCGGACAATGTTCTGGGTCACA 2988
Query: 61 AACCTGAGGAGGCTACTACAAAAGGTGGTGGCTAATTGTAACGTATGCAAGTTGCGGAAG 120
|| ||||| | | | | | || | | || |||| |||||||||| |
Sbjct: 2989 AAGATGAGGCGTGTGATGCGGAGAGTCATCTCATCGTGCAACGAGTGCAAGTTGCAGCGA 3048
Query: 121 GCACGACCGACACAAACGGAGATGGG-CCCATTGCCGGAGAATCGCCTTGAGGCAAATGG 179
|| || |||| | || ||||| ||| | ||||| | || || || |||
Sbjct: 3049 GCGCGGCCGATGCCGCCGATAATGGGACCCCAT-CCGGAAGACAAACTGGATGCGGGTGG 3107
Query: 180 ATGGCCATTTAAATTCACTGGCCTGGACTATTTCGGACCATTGCTTGTGTCGATTGGGCG 239
||||||||| |||| ||| || |||||||| || || ||| |||| ||| | | ||
Sbjct: 3108 ATGGCCATTCAAATACACAGGACTGGACTACTTTGGGCCACTGCTGGTGACTGTGTCCCG 3167
Query: 240 CCAAACAGAGAAGAGGTGGGTGGCGCTATTCACCTGCCTAACTACGAGAGCCGTCCACTT 299
|| | |||||| ||||| || | || || || | || || || || | ||| |
Sbjct: 3168 TCACAAGGAGAAGCT-TGGGTCGCCTTGTTTACGTGTTTGACGACAAGGGCGATTCACCT 3226
Query: 300 GGAGATGGCTCATGATTTGTCAACGGATTCATGCATCATTGCTATGAGAAACTTCATGTG 359
|||| |||| ||||| |||| |||||||| ||||| ||||| || || |||||| | ||
Sbjct: 3227 GGAGCTGGCGCATGACCTGTCGACGGATTCCTGCATAATTGCGATCAGGAACTTCGTCTG 3286
Query: 360 CCGCCGCGGACCGGTAGTTAGGATAAGAAGCGATAATGGCAAGAACTTCGTGGGAGCCGA 419
||| | || || ||| ||| | | |||||||| |||||||||||||||||||| ||
Sbjct: 3287 CCGTAGAGGGCCAGTATATAGACTGCGCAGCGATAACGGCAAGAACTTCGTGGGAGCTGA 3346
Query: 420 TAAAGAGGCCAGACGATTCAGCGATGTATTTGACTCAGCGAAGATACAGGGCGAGTTGTC 479
| || ||||| || || |||| ||||| || | |||| | ||| | |||||| |
Sbjct: 3347 CAGGGAAGCCAGGCGCTTTGGCGACGTATTCGAGATGGAGAAGCTTCAGAGTGAGTTGAC 3406
Query: 480 ATCTA-AAGCAATCGAATGGATCTTTAACTGCCCATCAAACCAGTGCGTGAAGAAGGT-T 537
| | ||||| | |||||| | ||||| || ||| | |||| || | ||| | || |
Sbjct: 3407 AAGCAGAAGCATT-GAATGGGTGTTTAATTGTCCAGCGAACCCGT-C-TGAGGGCGGAGT 3463
Query: 538 TTGGC-GCATACGATGAAG 555
|||| || | | || ||
Sbjct: 3464 TTGGGAGCGCATGGTGCAG 3482
Score = 748 (118.3 bits), Expect = 2.0e-76, Sum P(2) = 2.0e-76
Identities = 310/473 (65%), Positives = 310/473 (65%), Strand = Plus / Plus
Query: 520 CAGTGCGTGAAGAAGGTTTTGGCGCATACGATGAAGGAACTTGCACCCAAGGAGCACGTG 579
|||||||| |||| || || ||||| ||||||| |||| || | ||| || ||
Sbjct: 3480 CAGTGCGTCAAGAGAGTACTGCGTCATACCCAGAAGGAAGTTGCGCCGAGGGACCATGTA 3539
Query: 580 CTGGAGAACTTGCTGATCGAGCCGGAGAAT--TC----C-CGC--CCGCTCACGTACTTG 630
|||||| || ||||| ||| |||||||| | | ||| |||||||| |||||
Sbjct: 3540 TTGGAGAGTTTCCTGATTGAGGCGGAGAATATTGTAAACTCGCGTCCGCTCACCCACTTG 3599
Query: 631 CCCGATCACAGTGGACCAGGAGGCTCCACTGACACCAAACGACCTGTTGAAAGGAATGCC 690
|| | | |||||||||||||| || |||| |||||||| || | || ||| | |
Sbjct: 3600 CCTGTGGAT-GTGGACCAGGAGGCGCCGTTGACGCCAAACGATCTTCTCAAGGGAGTAGC 3658
Query: 691 CGACGTGCCAAATCTTCCTGGAGATGATGAATTGGCATCTGAGAGATGCACAACAAGGAA 750
| | |||| || |||||| |||| | | || | | || || |||||
Sbjct: 3659 CAATCTGCCGGATACGCCTGGATTGGATGCGGAGCTGCCCAAGGAAGGTACTACGAGGAA 3718
Query: 751 ACAGTGGCGTATCGCTCGGATGATAAGAGATCGGTTCTGGAA-ACGATGGGTGCACG-AG 808
|||||| | || |||| || || |||| || ||||||| | | ||||| || | ||
Sbjct: 3719 GCAGTGGAGAATTTCTCGCCTGCTACGAGACCGTTTCTGGAGGAAG-TGGGT-CATGGAG 3776
Query: 809 TGCTTGCTTAAACTTGTTCG-----A-AA-TGATGCCAGCGTGTTGAGCCCATGCGTCGA 861
| | ||| || ||||| || | || || |||| || |||||||| | |
Sbjct: 3777 TACCTGCCTACGCTTGTGCGCCGCGAGAAGTGGTGCCGACGAACGGAGCCCATCCACCAG 3836
Query: 862 GAAGACCTGGTATACATCTGCGATCCGGCCATACCACGCAGGGAGTGGAA-AAGAGTTGT 920
| || |||| | | |||||||||| ||| | | || | ||||| ||| || |
Sbjct: 3837 GGTGATGTGGTCTTCGTCTGCGATCCTGCCTTGGCCCGACGAGAGTGCCGCAAGGGTA-T 3895
Query: 921 CGTTGAAGAGGTGTTCACCGGGAAAGATGGAGT-GCCACGGCGGGCTTCGGTG 972
||| || ||| | | || ||| |||||||| | || | || ||| ||||
Sbjct: 3896 CGTGGAGGAGATCTACAGCGGAGCTGATGGAGTTGTCA-GACGCGCTAAGGTG 3947