Gene or accession: CG18288
Release: 1
Gene annotation error
Gene CG18288 has a mistake in the supporting evidence or functional assignment.
Comments: CG18288 can be deleted from GadFly--it appears to be part of an
aurora-like element (just 65%
identity, but over the whole length, so likely to be transposon sequence).
Query= CG18288|FBgn0033007|CT41493|FBan0018288 GO:<up></up> located on: 2R
41F3-41F3; |cDNA sequence
(996 letters)
Database: /data/blast/db/na_te.dros
55 sequences; 282,078 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High
Probability Sequences producing High-scoring Segment Pairs: Score
P(N) N
gb|AB022762|aurora-element DMAURA 4263bp Derived from AB0... 971 2.5e-57 2
>gb|AB022762|aurora-element DMAURA 4263bp Derived from AB022762 (d1268008)
(Rel. 59, Last updated, Version 1).
Length = 4263
Plus Strand HSPs:
Score = 971 (151.7 bits), Expect = 2.5e-57, Sum P(2) = 2.5e-57
Identities = 355/538 (65%), Positives = 355/538 (65%), Strand = Plus / Plus
Query: 455 CTGATGGAGGTGTCTGGGAAAGGATGGTCCAGTGCGTGAAGAAGGTTTTGGCG-CATACG 513
|||| || || || ||||| | ||||| |||||||| |||| || || || |||||
Sbjct: 3451 CTGAGGGCGGAGTTTGGGAGCGCATGGTGCAGTGCGTCAAGAGAGTACTG-CGTCATACC 3509
Query: 514 ATGAAGGAACTTGTACCCAAGAGGCACGTGCAGGAGAACTTGCTGATCGAGGCGGAGAAT 573
||||||| ||| || | | || || ||||| || ||||| ||||||||||||
Sbjct: 3510 CAGAAGGAAGTTGCGCCGAGGGACCATGTATTGGAGAGTTTCCTGATTGAGGCGGAGAAT 3569
Query: 574 ATAGTGAATTCCCGCCCGCTCACGCACTTGCCGATCACAATGGACCAGAAGGCTCCACTG 633
|| || || || || |||||||| |||||||| | |||||||| |||| || ||
Sbjct: 3570 ATTGTAAACTCGCGTCCGCTCACCCACTTGCCTGTGGATGTGGACCAGGAGGCGCCGTTG 3629
Query: 634 ACACCGAACGACCTGTTGAAAGGAATGCCCGACGTGCCAAATATTCCTGGAGATGATGAA 693
|| || ||||| || | || ||| | || | |||| ||| |||||| ||||
Sbjct: 3630 ACGCCAAACGATCTTCTCAAGGGAGTAGCCAATCTGCCGGATACGCCTGGATTGGATGCG 3689
Query: 694 TTGGCATCTGAGAGATGCACAACAAGGAAACAGTGGCGTATCGCTCGGATGATAAGAGAT 753
| | || | | || || ||||| |||||| | || |||| || || ||||
Sbjct: 3690 GAGCTGCCCAAGGAAGGTACTACGAGGAAGCAGTGGAGAATTTCTCGCCTGCTACGAGAC 3749
Query: 754 CGGTTCTGGAAATGGTGGGTGCACG-AGTACTTGCCCACACTTGTTGGCAGAGAGAAAGG 812
|| ||||||| |||||| || | ||||| |||| || ||||| || | ||||| |
Sbjct: 3750 CGTTTCTGGAGGAAGTGGGT-CATGGAGTACCTGCCTACGCTTGTGCGCCGCGAGAAGTG 3808
Query: 813 GTGCCAGCGTGTTGAGTCCATGCGTCGAGGAGACCTGTTATACATCTGCGATCCGGCCAT 872
||||| || ||| |||| | | || || || | | | |||||||||| ||| |
Sbjct: 3809 GTGCCGACGAACGGAGCCCATCCACCAGGGTGATGTGGTCTTCGTCTGCGATCCTGCCTT 3868
Query: 873 ACCACGCAGGGAGTGGAA-AAGAAGCGTCGTTGAAGAGGTGTTCACCGGAAAAGATGGAG 931
| || | ||||| ||| | |||| || ||| | | || |||| |||||||
Sbjct: 3869 GGCCCGACGAGAGTGCCGCAAGG-GTATCGTGGAGGAGATCTACAGCGGAGCTGATGGAG 3927
Query: 932 T-GCCACGTCCGGTTTCGGTGAGGACTAGCGAT--CGAGCCAAATTAGGGCTATCGAT 986
| | || | | | | |||| | | ||| || ||| | |||| | || |||
Sbjct: 3928 TTGTCA-GACGCGCTAAGGTGCGCGTGAACGAAAACG-GCCTATCTAGGACAAT-GAT 3982
Score = 447 (73.1 bits), Expect = 2.5e-57, Sum P(2) = 2.5e-57
Identities = 177/282 (62%), Positives = 177/282 (62%), Strand = Plus / Plus
Query: 1 ATGTGCCACCCAAACGTGGAGGCCACCATCGGCGAGATTCGTCGAAAGTTTTGGATAACT 60
||| || | ||| ||||| || || |||| ||||| || || ||| ||| | ||
Sbjct: 2929 ATGAAGCATCAAAATGTGGATGCTACGATCGCGGAGATCCGGACAATGTTCTGGGTCACA 2988
Query: 61 AACGTGAGGAGGCTGCAACAGAAGGTGGTGGCTAATTGTAACGTATACAAGTTGCAGAAG 120
|| ||||| | || | || || | | || |||| | ||||||||||
Sbjct: 2989 AAGATGAGGCGTGTGATGCGGAGAGTCATCTCATCGTGCAACGAGTGCAAGTTGCAGCGA 3048
Query: 121 GCACGACCGACACAACCGGAGATGGG-CCCATTGCCGGAGGATCGGCTTGAGACAAATGG 179
|| || |||| | ||| ||||| ||| | ||||| || || || | |||
Sbjct: 3049 GCGCGGCCGATGCCGCCGATAATGGGACCCCAT-CCGGAAGACAAACTGGATGCGGGTGG 3107
Query: 180 ATGGCCATTTAAATTCACTGGCCTAGACTATTTCGGACCATTGCTTGTGTCGATTGGGCG 239
||||||||| |||| ||| || || ||||| || || ||| |||| ||| | | ||
Sbjct: 3108 ATGGCCATTCAAATACACAGGACTGGACTACTTTGGGCCACTGCTGGTGACTGTGTCCCG 3167
Query: 240 CCGAACAGAGAAGAGGTGGGTGGCGCTACTCACCTGCCTAAC 281
| | |||||| ||||| || | | || || | ||
Sbjct: 3168 TCACAAGGAGAAGCT-TGGGTCGCCTTGTTTACGTGTTTGAC 3208