Gene or accession: CG3549
Release: 1
Gene annotation error
Gene CG3549 has a mistake in the supporting evidence or functional assignment.
Comments: CG3549 can be deleted from Gadfly--it appears to be part of a
Waldo-A-like element (just 76%
identity, but it looks convincing).
Query= CG3549|FBgn0032954|CT11930|FBan0003549 GO:<up>enzyme (GO:0003824)</up>
located on: 2L 39E2-39E2; |cDNA sequence
(964 letters)
Database: /data/blast/db/na_te.dros
55 sequences; 282,078 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High
Probability Sequences producing High-scoring Segment Pairs: Score
P(N) N
gb|AC005734|Waldo-A WALDOA 5150bp 1901 1.6e-107
2 gb|AC005847|Waldo-B WALDOB 5180bp 1015 4.0e-64
3 gb|AJ278684|pilger DME278684 5108bp Derived from AJ278684... 973 2.5e-51
2
>gb|AC005734|Waldo-A WALDOA 5150bp
Length = 5171
Plus Strand HSPs:
Score = 1901 (291.3 bits), Expect = 1.6e-107, Sum P(2) = 1.6e-107
Identities = 527/685 (76%), Positives = 527/685 (76%), Strand = Plus / Plus
Query: 2 TGTGTGCGCCGACAAGAAGGGAGAACGGAGATCT-GCGAAG-GAGTTGGGAAAG-ACAC- 57
|| |||| ||||| || | || | | | || ||| | || | ||||
Sbjct: 1813 TGCGTGC-CCGACCTACAGAGCGACCCTAAAAGAAGCCAAGAGCCACCTTAATGCACACT 1871
Query: 58 CAACTTGGGGT-G-ACC-CGCAATCTGCACCTGTTAAGCAGCAGAACGGAGAAAGCTCAG 114
|| || | || | || | |||| | | | || ||||||| | ||| || |
Sbjct: 1872 CATATTAGCGTAGTACAGCTCAATGTCAATCA-TTGCGCAGCAGCTCAGAGCCTCCTG-G 1929
Query: 115 CTTTTCCGTGCACGTG-GCGGGCTCTACAGTTGCACGCAGATGTGT-ATTTTTACTGCGA 172
| | ||| || ||| | || | | || || | | | ||| |
Sbjct: 1930 CCCAGAC-TGCGGCTGAGCGCAATGTAGACAT-CATGCTCCTAAGCGAACCCTACGTCTC 1987
Query: 173 TGA-AGTCGGGACCATACTCCATGATCCTAGACGAGTCAGGCAGAGCTGCTATCAAGTGT 231
|| || ||| || || ||||||||||| |||||| |||| | ||| |||||||| ||
Sbjct: 1988 TGGTAG-CGG-ACAATCGTCCATGATCCTTGACGAGACAGGTAAAGCAGCTATCAAATGC 2045
Query: 232 TGCAGCTTTCTCCAAGTCCAGGAACTGGCTGCATCACCGATGCGGGGAATCGCACATGCA 291
||||||| |||||| ||| ||||||||||||| | ||| |||||||| ||||| ||||
Sbjct: 2046 TGCAGCTCTCTCCACGTCGAGGAACTGGCTGCTTTACCTATGCGGGGTATCGCTTATGCG 2105
Query: 292 AAGATAAAACACGTGCATATGTACAGCTGCTATGCTCCGCCTAGCGACACTCCCGACCAG 351
||| ||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||
Sbjct: 2106 AAGTTAAAACACGTGCACTTGTACAGCTGCTACGCTCCGCCGAGCGACACCCCCGATCAG 2165
Query: 352 TACGAGGAGTTCCTGGAGGCGCTTGGGGACCATGCGAGAGGGCGAAGCCCGAAGATCATT 411
| ||||||||| ||||||||||| | |||||||||||||||||||||||||||| |||||
Sbjct: 2166 TTCGAGGAGTTTCTGGAGGCGCTCGTGGACCATGCGAGAGGGCGAAGCCCGAAGGTCATT 2225
Query: 412 GCAGGTGATTTTAATGTCTGGGCAGTGGAATGGGGCAGCAGAGTATCCAACCCCAGAGGC 471
|| || || ||||||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 2226 GCCGGCGACTTTAATGCCTGGGCAGTGGAATGGGGCAGCAGGACATCCAACACCAGAGGC 2285
Query: 472 CGAGCAGTGATAGACGTCATGGGAATGCTGGACCTAGTACTGCTGAACGACGGTCGAAAG 531
||||| ||||| |||| |||||||||||||||||| |||||||||||||||| || |||
Sbjct: 2286 CGAGCTGTGATTGACGCCATGGGAATGCTGGACCTTATACTGCTGAACGACGGACGGAAG 2345
Query: 532 CCGACATTTAACAACGATAGGGGTACATCATTTATTGACGTTACCTTTGTCAGTAGAGGG 591
||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 2346 CCGACGTTTAACAACGATAGGGGTACGTCCTTTATTGACGTTACCTTTGTCAGCAGAGGG 2405
Query: 592 CTTGTTGATAACAACAACTGGATGGTCTATGATTTTGTAACGCTGAGCGACCACGCTTTG 651
|| || || ||||| |||||||||||| |||| | | ||||||||||||||||| ||
Sbjct: 2406 CTAGTAGACAACAATAACTGGATGGTCCATGACGTCATGACGCTGAGCGACCACGCCCTG 2465
Query: 652 ATTTCCTTCATTCCCTCCCCGGAGG 676
|| ||||||| || |||||||||||
Sbjct: 2466 ATCTCCTTCAGTCTCTCCCCGGAGG 2490
Score = 626 (100.0 bits), Expect = 1.6e-107, Sum P(2) = 1.6e-107
Identities = 142/163 (87%), Positives = 142/163 (87%), Strand = Plus / Plus
Query: 802 GTGGGAGCAGCTAAAGTCGCTGGCAGGTACCCCGTTCAGCCCTAGTGGCTTGTTCGCGGC 861
| | |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 4664 GAGAGAGCAGCTAAAGACGCTGTCAGGTTCCCCGTTCAGCCCTAGTGGCTTGTTCGCGGC 4723
Query: 862 TATGCTGGCGAACAGCGAGGCATGGGAGCTGGGTCACAGCCTTATAATTAAGATTATGGA 921
|||| |||||||||| | ||| ||||||| ||| |||||| |||| ||||| || ||| |
Sbjct: 4724 TATGATGGCGAACAGGGGGGCTTGGGAGCGGGGACACAGCATTATCATTAATATGATGAA 4783
Query: 922 GCGAGTCCGATCAGACGAGATGGCCAACAGAGTTCGTGGCTAA 964
||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 4784 GCGTGTCCGATCAGACGAGATGGCCAACAGAGTGGATGTCTAA 4826
Score = 553 (89.0 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 181/251 (72%), Positives = 181/251 (72%), Strand = Plus / Plus
Query: 676 GTTTCTCACGGACCATGGCTGCTTTCGGGCCTATTTACTCAGGTTCCGCCACGTAGAGTC 735
||| |||||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||
Sbjct: 4526 GTTCCTCACGGACCATGGCTGCTTCCGGGCCTATCTACTCCGGTTCCGTCACGTAGAGTC 4585
Query: 736 AGCCCAATGCGTGTTCTGCGTCGATCGTGAAGAAACAGCTGAACATGTGATAATGCACTG 795
|||||||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 4586 AGCCCAATGCTTGTTCTGCGTCGACGGTGAAGAAACAGCAGAACATGTGCTAATGCACTG 4645
Query: 796 CTCCAGGTG---GGAGCAGCTAAAGTCGCTGGC-AGG-TACCCCGTTCAGCCCTAGTGGC 850
|||||||| || | || | || ||| | | | | |||| || | | |
Sbjct: 4646 CTCCAGGTTCACGGCGGAGAGAGAGCAGCTAAAGACGCTGTCAGGTTCC-CCGTTCAGCC 4704
Query: 851 TTGTTCGCGGCTATGCTGGCGAACA--GCGAGGCATGGGAGCT-GGGT-CACAGCCTTAT 906
| | || | || ||| | | |||| || ||| ||| ||| | | | |
Sbjct: 4705 CTAGTGGCTTGTTCGC-GGCTATGATGGCGAA-CAGGGGGGCTTGGGAGCGGGGACACAG 4762
Query: 907 AATTAAGATTA 917
|||| ||||
Sbjct: 4763 CATTATCATTA 4773