Gene or accession: CG18225
Release: 1
Gene annotation error
Gene CG18225 has a mistake in the supporting evidence or functional assignment.
Comments: CG18225 can be deleted--it appears to be part of a Waldo-A element
(just 83% identity
but over its whole length).
Query= CG18225|FBgn0033011|CT41254|FBan0018225 GO:<up></up> located on: 2R
41F3-41F3; |cDNA sequence
(306 letters)
Database: /data/blast/db/na_te.dros
55 sequences; 282,078 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High
Probability Sequences producing High-scoring Segment Pairs: Score
P(N) N
gb|AC005734|Waldo-A WALDOA 5150bp 963 3.7e-40 1
>gb|AC005734|Waldo-A WALDOA 5150bp
Length = 5171
Plus Strand HSPs:
Score = 963 (150.5 bits), Expect = 3.7e-40, P = 3.7e-40
Identities = 231/276 (83%), Positives = 231/276 (83%), Strand = Plus / Plus
Query: 1 ATGGCCCTTAATCCTCGGAGCCATGAACTGAATGGGGATTGCGGAGTATCTGAGGATAGT 60
||||||| ||||||||| |||||| || | |||||||| ||||||| || ||||||||
Sbjct: 3554 ATGGCCCGTAATCCTCGCGGCCATGTACCGTATGGGGATCCCGGAGTACCTAAGGATAGT 3613
Query: 61 CGTTGGCAGCTACTTTACGGACCGGGTCCTATGGTGCGATACGGAAGCTGGCCCAAAATG 120
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |
Sbjct: 3614 CGTTGGCAGCTACTTTAGGGACCGGGTCCTATGGTACGATACGGAAGATGGCCCAAAAAG 3673
Query: 121 ATACCGAGTTTCGGCAGGTGTTCCCCAAGAATCGGTACGTGGACCAATCCTGTAGAACAT 180
||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||
Sbjct: 3674 ATACCGAGTTTCGGCAGGTGTTCCCCAAGGATCGGTACTTGGACCAATCCTATGGAACAT 3733
Query: 181 CATGTACGATGGGATCTTGGGCATCAACAGGCCCGTGGGAGTAGGGTGGCAAT-TACAGC 239
||||||||||||||||||||||||||||||||||| ||||||| | ||| | | ||
Sbjct: 3734 TATGTACGATGGGATCTTGGGCATCAACAGGCCCGTAGGAGTAGAGCTGCATTGTTTTGC 3793
Query: 240 AGCCGCCAAAACAATCGCAGG-GTTGCAAGATAAAT 274
| || ||||| ||| || | | | |||
Sbjct: 3794 TGACGATGTGGCAATCACAGCTGTCTCGAAAACAAT 3829
Score = 284 (48.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 132/211 (62%), Positives = 132/211 (62%), Strand = Plus / Plus
Query: 96 GCGATACGGAAGCTGGCCCAAAATGATACCGAGTTTCGGCAGGTGTTCCCCAAGAATCGG 155
| | | ||| || || || || ||| | | || | | | | || | | |
Sbjct: 3679 GAGTTTCGGCAGGTGTTCCCCAAGGAT-CGGTACTTGGACCAATCCTATGGAACATTATG 3737
Query: 156 TACG-TGGACCAATCCTGTAGAACATCATGTACGATGGGATCTTGGGCATCAACAGGCCC 214
|||| ||| ||| || | || || | || | ||| | | || || |
Sbjct: 3738 TACGATGGG---ATCTTGGGCATCAACAGGCCCG-TAGGAG-TAGAGCTGCATT-GTTTT 3791
Query: 215 GTGGGAGTAGGGTGGCAATTACAGCAGCCGCCAAAACAATCGCAGGGTTGCAAGATAAAT 274
| | | | | ||||||| ||||| | | | |||||||||||||||||| |||| ||||
Sbjct: 3792 GCTGACG-ATG-TGGCAATCACAGCTGTCTCGAAAACAATCGCAGGGTTGGAAGACAAAT 3849
Query: 275 GTAACATTACGATTGGTGCTACCATCCACTG 305
| ||| |||||| |||||| |||||| |||
Sbjct: 3850 GCAACTCTACGATCGGTGCTGCCATCCGCTG 3880