FB2026_03 , released September 17, 2026
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Citation
Bhattacharya, S., Iyer, E.P., Iyer, S.C., Cox, D.N. (2014). Cell-type specific transcriptomic profiling to dissect mechanisms of differential dendritogenesis.  Genom. Data 2(): 378--381.
FlyBase ID
FBrf0227100
Publication Type
Research paper
Abstract
The establishment, maintenance and modulation of cell-type specific neural architectures is critically important to the formation of functional neural networks. At the neuroanatomical level, differential patterns of dendritic arborization directly impact neural function and connectivity, however the molecular mechanisms underlying the specification of distinct dendrite morphologies remains incompletely understood. To address this question, we analyzed global gene expression from purified populations of wild-type class I and class IV Drosophila melanogaster dendritic arborization (da) sensory neurons compared to wild-type whole larval RNA using oligo DNA microarray expression profiling. Herein we present detailed experimental methods and bioinformatic analyses to correspond with our data reported in the Gene Expression Omnibus under accession number GSE46154. We further provide R code to facilitate data accession, perform quality controls, and conduct bioinformatic analyses relevant to this dataset. Our cell-type specific gene expression datasets provide a valuable resource for guiding further investigations designed to explore the molecular mechanisms underlying differential patterns of neuronal patterning.
PubMed ID
PubMed Central ID
PMC4260420 (PMC) (EuropePMC)
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Secondary IDs
    Language of Publication
    English
    Additional Languages of Abstract
    Parent Publication
    Publication Type
    Journal
    Abbreviation
    Genom. Data
    Title
    Genomics data
    ISBN/ISSN
    2213-5960
    Data From Reference
    Genes (1)