FB2026_03 , released September 17, 2026
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Citation
Prata, G.N., Hornos, J.E., Ramos, A.F. (2016). Stochastic model for gene transcription on Drosophila melanogaster embryos.  Phys. Rev. E 93(2-1): 022403.
FlyBase ID
FBrf0231283
Publication Type
Research paper
Abstract
We examine immunostaining experimental data for the formation of stripe 2 of even-skipped (eve) transcripts on D. melanogaster embryos. An estimate of the factor converting immunofluorescence intensity units into molecular numbers is given. The analysis of the eve dynamics at the region of stripe 2 suggests that the promoter site of the gene has two distinct regimes: an earlier phase when it is predominantly activated until a critical time when it becomes mainly repressed. That suggests proposing a stochastic binary model for gene transcription on D. melanogaster embryos. Our model has two random variables: the transcripts number and the state of the source of mRNAs given as active or repressed. We are able to reproduce available experimental data for the average number of transcripts. An analysis of the random fluctuations on the number of eves and their consequences on the spatial precision of stripe 2 is presented. We show that the position of the anterior or posterior borders fluctuate around their average position by ∼1% of the embryo length, which is similar to what is found experimentally. The fitting of data by such a simple model suggests that it can be useful to understand the functions of randomness during developmental processes.
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Secondary IDs
    Language of Publication
    English
    Additional Languages of Abstract
    Parent Publication
    Publication Type
    Journal
    Abbreviation
    Phys. Rev. E
    Title
    Physical review. E.
    ISBN/ISSN
    2470-0045 2470-0053
    Data From Reference
    Genes (1)