FB2026_03 , released September 17, 2026
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Tian, B., Liu, X. (2020.2.20). Polyadenylation site data for Liu et al., 2017. 
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FBrf0244951
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Personal communication to FlyBase
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52,844 polyadenylation sites (PASs) were identified and used for genome-wide statistics in the Liu et al., 2017 publication (FBrf0237295). For downstream analysis, only the 46,314 sites with ≥ 2 "polyA site supporting" (PASS) reads were used for downstream analysis; PASS reads are defined in Hoque et al., 2014 (PMID: 24590784). These more stringent PAS calls are in the attached file, with PASS scores in column 4.
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Related Publication(s)
Research paper

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster.
Liu et al., 2017, RNA 23(12): 1807--1816 [FBrf0237295]

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Comments

Coordinates in this file are relative to the Release 5 assembly (superceded by the Release 6 assembly at time of this personal communication).

Associated Files
File date: 2020.2.20 ; File size: 2388615 ; File format: tsv ; File name: Tian.2020.2.20.polyA_sites.tsv
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    English
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