FB2026_03 , released September 17, 2026
Sequence Feature: Dmel\DRSC17420
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General Information
Symbol
Dmel\DRSC17420
Species
D. melanogaster
Feature type
RNAi_reagent
FlyBase ID
FBsf0000035762
Collection
Associated gene
Genomic Location
Chromosome (arm)
Sequence location
Genomic Maps

Multiple sequence regions exist. Please click on a sequence location for a JBrowse view of the region.

Sequence Data
Length
390
Comments

One copy of repeat shown

(Booker, 2006.5)

Sequence

Sequence Downloader
TGAATTTTTTGACAACCATTAACCCATTTTTCGAAATGGTTACACCGCTTTTGTCAAATTCGATCGACATTCCTGCCTCT
TGGAGACGCTTTACGGACATCAAATTACCAGCAGCTTCCTTACAAAAGAGTACATCCTCCAGTGTAATCTCATGGTCATT
CCGTAGTCGGACAATACCACGCTTAGTGGCATAAATAAATTCGCCTTGCTTGGCCACTGCAATCTTAAGTGGAGGCACAA
CCTCCACACTGTCGGTATACAGCGACTCATCATTTATAAGATGGTCACTAGCACCAGAATCAAGGACAAACCCGCAGTTG
TCCATCACTGAAGTATTATTCACTTCTTTTACCATAAACGCAATGCCGTGTGATGTTGCAGTTTGAACTT
Associated Information
Gene(s) (targeted or local)
    Allele(s)
      Transcripts(s)
        Polypeptide(s)
          Construct
            Experimental Data
            Progenitors
            PCR template

            genomic DNA

            (Booker, 2006.5)
            Primer 1 
            AAGTTCAAACTGCAACATCAC
            (Booker, 2006.5)
            Primer 2 
            TGAATTTTTTGACAACCATTAACC
            (Booker, 2006.5)
            Comments
            Collection Information
            Collection: DRSC_dsRNA
            Symbol
            DRSC_dsRNA
            Title
            DRSC collection of dsRNA for RNAi in cell culture.
            Source and Progenitors
            Species of derivation
            D. melanogaster
            Strain of derivation
            Vector of progenitor construct
            Description

            Comprehensive collection of double-strand RNA fragments (1-2 dsRNAs per annotated gene), used for genome-wide RNAi-knockdown assays in cell culture.

            Additional data
            Sample preparation
            Collection preparation

            The DRSC RNAi screening library was constructed from genomic DNA amplified using Oregon-R strain. In initial collection, most amplicons were designed to FlyBase rel2 at R.Paro's lab (ZMBH Heidelberg). Primers were selected to target the open reading frames (ORF) of known and predicted genes. Regularly updated to accommodate newly identified genes and new gene models, and to replace amplicons with high potential for off-target effects.

            (Flockhart et al., 2006)
            Mode of assay
            Data analysis
            Cell lines
            Observed in
            Not observed in
            Comments

            This sequence feature was not migrated from genomic release 5 to release 6: no unique site (within repeat).

            (Schroeder, 2014.6.12)
            Stocks (0)
            External Crossreferences and Linkouts ( 1 )
            Crossreferences
            DRSC - Results frm RNAi screens
            Synonyms and Secondary IDs (1)
            Reported As
            Symbol Synonym
            DRSC17420
            Secondary FlyBase IDs
              References (2)