FB2026_03 , released September 17, 2026
Sequence Feature: Dmel\BKN40073
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General Information
Symbol
Dmel\BKN40073
Species
D. melanogaster
Feature type
RNAi_reagent
FlyBase ID
FBsf0000411513
Collection
Associated gene
Genomic Location
Chromosome (arm)
Sequence location
Genomic Maps

Multiple sequence regions exist. Please click on a sequence location for a JBrowse view of the region.

Sequence Data
Length
700
Comments

Sequence

Sequence Downloader
GCCGACCTCTCATATTGCTCAAAACGTATGTGGTCATATGATTCTGGCAATTATATGAGTAAATTAAATCATATACATAT
GAAAACTAATATTTATTATGTGTATAAGTGAAAAATGTTGAAATATTCCCATATTCTCTAAGTATTATAGAGAAAAGCCA
TTTTAGTGAATGGATATAGTAGTGTAAGCTAGCTGTTCTACGACAGAGGGTTCAAAAACTACTATAGGTAGGCAGTGGTT
GCCGACCTCTCATATTGTTCAAAACGTATGTGTTCATATGATTTTGGCAAATTATATGAGTAAATTAAATCATATACATA
TGAACATTAATATTTATTATGTGTATAAGTGAAAAATGTTGAAATATTCCCATATTCTCTAAGTATTATAGAGAAAAGCC
ATTTTAGTGAATGGATATAGCACTGTAAGCTAGCTGTTCTTCGACAGAGGGTTCAAAAACTACTATAGGTAGGCAGTGGT
TCCCGACCTCTCATATTGTTCAAAACGTATGTGTTCATATGATTTTGGCAATTATATGAGTGAATTCAATCATATACATA
TGAAAATAAATATTTATTATATGTATATGGAAGAAATGTTGAAATATTCCCATATTCTCTAAGTATTATAGAGAAAAGCC
ATTTTAGTGAATGGATATAGTAGTGTAAGCTAGCTGTTTTACGACAGAGGGTTCCAAAAC
Associated Information
Gene(s) (targeted or local)
    Allele(s)
      Transcripts(s)
        Polypeptide(s)
          Construct
            Experimental Data
            Progenitors
            PCR template

            genomic DNA

            (Horn et al., 2011.11.16)
            Primer 1 
            GCCGACCTCTCATATTGCTC
            (Horn et al., 2011.11.16)
            Primer 2 
            GTTTTGGAACCCTCTGTCGT
            (Horn et al., 2011.11.16)
            Comments
            Collection Information
            Collection: BKN_dsRNA
            Symbol
            BKN_dsRNA
            Title
            GenomeRNAi BKN collection of dsRNA for RNAi in cell culture.
            Source and Progenitors
            Species of derivation
            D. melanogaster
            Strain of derivation
            Vector of progenitor construct
            Description

            Collection of double-strand RNA fragments, used for genome-wide RNAi-knockdown assays in cell culture. RNAi targeting of transcripts annotated by the Berkeley Drosophila Genome Project and additionally predicted gene models.

            Additional data
            Sample preparation
            Collection preparation
            Mode of assay
            Data analysis
            Cell lines
            Observed in
            Not observed in
            Comments

            This sequence feature was not migrated from genomic release 5 to release 6: no unique site (within rRNA repeat).

            (Schroeder, 2014.6.12)

            Targeted gene annotation CR40572 was removed in subsequent FlyBase update.

            (dos Santos, 2023.2.8)
            Stocks (0)
            External Crossreferences and Linkouts ( 0 )
            Synonyms and Secondary IDs (1)
            Reported As
            Symbol Synonym
            BKN40073
            (Horn et al., 2011.11.16)
            Secondary FlyBase IDs
              References (3)