FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Natural Transposon: Dsim\mdg1
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General Information
Symbol
Dsim\mdg1
Species
D. simulans
Feature type
FlyBase ID
FBte0000181
Sequences and Components
Complete element (bp)
Terminal repeat (bp)
Component genes
Sequence Accessions
Sequence Ontology (SO)
Transposon type
Insertions and Copy Number
Copy number and comments

TE copies retrieved from the CAF1 assembly (from AAA) of the mosaic assembly of genomes from different strains of D. simulans.:64

Target Site Duplication
Size (bp)
Orthologs
Curated drosophilid orthologs
Comments

Dsim\mdg1 elements are enriched in the heterochromatin and on the Y chromosome.

A lower proportion of copia, mdg1 and 412 element insertion sites on the X chromosome, from various populations of D.melanogaster and D.simulans, in comparison with autosomes suggests that selection against the detrimental effects of TE insertions in the major force containing TE copies in populations.

Numbers of mdg1, mdg3, gypsy and copia have been studied in several strains of D.melanogaster and D.simulans. Mean number of mdg1 and copia sites are drastically reduced in D.simulans. Majority of mdg1 and copia sites, and one third of mdg3 sites, are in hot spots for insertion, particularly in D.simulans. Southern blot analysis indicates that the majority of mdg1 and copia are in the euchromatin of D.melanogaster but the heterochromatin of D.simulans.

Other Information
Etymology
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (5)
Reported As
Secondary FlyBase IDs
  • FBgn0015166
References (11)