FlyBase Natural Transposon Report: Dmel\frogger

General Information

Symbol

frogger

Species

D. melanogaster

Feature type

natural_transposable_element

FlyBase ID

FBte0000314

Sequences and Components

Complete element (bp)

2483

(Kaminker et al., 2002)

Terminal repeat (bp)

Reference sequence

transposon_sequence_set.fa.gz transposon_sequence_set.gff.gz

Component genes

frogger\polyprotein

Sequence Accessions

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

AF492763

Sequence Ontology (SO)

Transposon type

LTR_retrotransposon

(Kaminker, 2002.3.15, Kaminker et al., 2002)

Insertions and Copy Number

Copy number and comments

1 in euchromatin of Release 3 genome annotation.

(Kaminker et al., 2002)

Search for

Target Site Duplication

Size (bp)

Orthologs

Curated drosophilid orthologs

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 1 )

Crossreferences

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

AF492763

Synonyms and Secondary IDs (3)

Reported As

Symbol Synonym

FROGGER

(Rigal et al., 2022, Vujatovic et al., 2012)

Frogger

(Zhao et al., 2019, Zhang and Pugh, 2011)

frogger

(Wierzbicki et al., 2023, de Oliveira et al., 2021, Nefedova and Kim, 2017, Czech et al., 2013, Ohtani et al., 2013, Kofler et al., 2012, Petrov et al., 2011, Lu and Clark, 2010, Kawamura et al., 2008, FlyBase, 1992-)

Secondary FlyBase IDs

FBgn0061513
FBtp0017057

References (19)

Report Sections

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