FlyBase Natural Transposon Report: Dsim\ninja

General Information

Symbol

Dsim\ninja

Species

D. simulans

Feature type

natural_transposable_element

FlyBase ID

FBte0000536

Sequences and Components

Complete element (bp)

Terminal repeat (bp)

316

(Yamamoto, 1996.1.23)

Reference sequence

transposon_sequence_set.fa.gz transposon_sequence_set.gff.gz

Component genes

Dsim\ninja\pol

Sequence Accessions

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

Sequence Ontology (SO)

Transposon type

LTR_retrotransposon

(Yamamoto, 1996.1.23)

Insertions and Copy Number

Copy number and comments

Search for

Target Site Duplication

Size (bp)

Orthologs

Curated drosophilid orthologs

Dmau\ninja

ninja

(Rutsov et al., 1999)

Dsec\ninja

Dtei\ninja

Dyak\ninja

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 50 )

Crossreferences

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

Synonyms and Secondary IDs (3)

Reported As

Symbol Synonym

Dsim\ninja

NINJA

(Satyaki et al., 2014)

ninja

(Ogura et al., 2005, Boussy and Itoh, 2004, Abe et al., 2001)

Secondary FlyBase IDs

FBgn0015168
FBtp0011473

References (12)

Report Sections

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