FlyBase Natural Transposon Report: Dmel\transib3

General Information

Symbol

transib3

Species

D. melanogaster

Feature type

natural_transposable_element

FlyBase ID

FBte0000725

Sequences and Components

Complete element (bp)

2883

(Kapitonov and Jurka, 2003, Kaminker et al., 2002)

Terminal repeat (bp)

(Kapitonov and Jurka, 2003)

Reference sequence

transposon_sequence_set.fa.gz transposon_sequence_set.gff.gz

Component genes

Sequence Accessions

Sequence Ontology (SO)

Transposon type

terminal_inverted_repeat_element

(Lipatov et al., 2005, Kapitonov and Jurka, 2003, Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

Insertions and Copy Number

Copy number and comments

7 in euchromatin of Release 3 genome annotation, of which zero are full length.

(Kaminker et al., 2002)

(Kapitonov and Jurka, 2003)

Search for

Target Site Duplication

Size (bp)

Orthologs

Curated drosophilid orthologs

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (5)

Reported As

Symbol Synonym

TRANSIB3

(Rigal et al., 2022)

Transib

(Mostoufi and Singh, 2024, Mérel et al., 2020)

Transib3

(Kapitonov and Jurka, 2005)

transib

(Petrov et al., 2011)

transib3

(Bologa et al., 2023, Wierzbicki et al., 2023, Sytnikova et al., 2014, Kofler et al., 2012, Sienski et al., 2012, Deloger et al., 2009, Ghildiyal et al., 2008, Kawamura et al., 2008, Lipatov et al., 2005, FlyBase, 1992-)

Secondary FlyBase IDs

FBgn0063370
FBtp0017078

References (20)

Report Sections