FlyBase Natural Transposon Report: Dmel\transib2

General Information

Symbol

transib2

Species

D. melanogaster

Feature type

natural_transposable_element

FlyBase ID

FBte0000885

Sequences and Components

Complete element (bp)

2844

(Kapitonov and Jurka, 2003, Kaminker et al., 2002)

Terminal repeat (bp)

(Kapitonov and Jurka, 2003)

Reference sequence

transposon_sequence_set.fa.gz transposon_sequence_set.gff.gz

Component genes

Sequence Accessions

Sequence Ontology (SO)

Transposon type

terminal_inverted_repeat_element

(Kapitonov and Jurka, 2003, Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

Insertions and Copy Number

Copy number and comments

12 in euchromatin of Release 3 genome annotation, of which zero are full length.

(Kaminker et al., 2002)

(Kapitonov and Jurka, 2003)

Search for

Target Site Duplication

Size (bp)

(Linheiro and Bergman, 2012)

Orthologs

Curated drosophilid orthologs

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

TRANSIB2

(Rigal et al., 2022, Satyaki et al., 2014)

Transib

(Mostoufi and Singh, 2024, Mérel et al., 2020)

Transib2

(Chen et al., 2021, Kapitonov and Jurka, 2005)

transib

(Petrov et al., 2011)

transib 2

(Malone et al., 2009)

transib2

(Bologa et al., 2023, Wierzbicki et al., 2023, Rech et al., 2019, Kofler et al., 2015, Senti et al., 2015, Sytnikova et al., 2014, Czech et al., 2013, Ohtani et al., 2013, Kofler et al., 2012, Linheiro and Bergman, 2012, Pane et al., 2011, Li et al., 2009, Brennecke et al., 2008, González et al., 2008, Kawamura et al., 2008, Brennecke et al., 2007, Bergman et al., 2006, FlyBase, 1992-)

Secondary FlyBase IDs

FBgn0063371
FBtp0017077

References (31)

Report Sections

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