FB2026_02 , released June 18, 2026
Natural Transposon: Dsim\mariner
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General Information
Symbol
Dsim\mariner
Species
D. simulans
Feature type
FlyBase ID
FBte0000888
Sequences and Components
Complete element (bp)
Terminal repeat (bp)
Component genes
Sequence Accessions
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Sequence Ontology (SO)
Insertions and Copy Number
Copy number and comments
Target Site Duplication
Size (bp)
Orthologs
Curated drosophilid orthologs
Comments

The somatic activity of the mariner transposable element in natural populations of D.simulans is assayed. Results strongly suggest temperature could be involved in the regulation of Dsim\mariner somatic excision.

Natural populations of D.simulans are relatively stable and the Dsim\mariner element is probably an ancient component of the genome.

Significant decrease in lifespan of D.simulans males results from the movement of Dsim\mariner.

Distribution of the mariner element among Drosophilidae species is investigated using three different techniques (squash blots, Southern blots and PCR amplification). Results demonstrate the distribution of mariner is not uniform and does not follow the phylogeny of the host species. Analysis of geographical distributions of the element shows it is mainly present in Asia and Africa.

Population biology and molecular evolution of the mariner element in the eight species of the melanogaster subgroup of the Drosophila subgenus Sophophora has been studied. The element occurs in D.simulans, D.mauritiana, D.sechellia, D.teissieri and D.yakuba, but not D.melanogaster, D.erecta or D.orena. Sequence comparisons suggest that the element was present in the ancestor of the species subgroup and was lost in some of the lineages. Most species that contain active elements also contain inactive elements.

Comparison of active and inactive mariner elements from D.simulans, D.mauritiana and D.sechellia suggests that the mariner elements in D.mauritiana and D.sechellia are derived from D.simulans.

Most strains of D.simulans have a low copy number of Dsim\mariner.

The distribution of the mariner transposable element in the genus Drosophila has been examined. Sequences hybridising to Dmau\mariner are present in D.mauritiana, D.simulans, D.sechellia, D.yakuba and D.teissieri, but not D.melanogaster, D.erecta and D.orena.

Active Dsim\mariner elements are abundant in all 13 populations studied.

Other Information
Etymology
External Crossreferences and Linkouts ( 13 )
Crossreferences
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Synonyms and Secondary IDs (13)
Reported As
Symbol Synonym
Dsim\mariner
mariner element
mariner-BordA
mariner-L14
mariner-L8
mariner-MadB
mariner-Mos6a
mariner-Mos6b
mariner-Pr1
mariner-PrA
mariner-Sey2
Secondary FlyBase IDs
  • FBgn0012873
References (45)