FlyBase Natural Transposon Report: Dpse\HTR1A

General Information

Symbol

Dpse\HTR1A

Species

D. pseudoobscura pseudoobscura

Feature type

natural_transposable_element

FlyBase ID

FBte0001376

Sequences and Components

Complete element (bp)

Terminal repeat (bp)

Reference sequence

transposon_sequence_set.fa.gz transposon_sequence_set.gff.gz

Component genes

Sequence Accessions

Sequence Ontology (SO)

Transposon type

retrotransposon

(Villasante et al., 2007)

Insertions and Copy Number

Copy number and comments

Search for

All insertions of this transposon
Insertions in the sequenced strain
Insertions in other strains

Target Site Duplication

Size (bp)

Orthologs

Curated drosophilid orthologs

Comments

Dpse\HTR1A is a "half telomeric retrotransposon", a deleted telomeric retrotransposon that has lost open reading frame 2 (and is thus expected to be non-autonomous as it cannot produce reverse transcriptase).

(Villasante et al., 2007)

Other Information

Etymology

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (1)

Reported As

Symbol Synonym

Dpse\HTR1A

Secondary FlyBase IDs

References (1)

Report Sections

Open Close