FB2026_03 , released September 17, 2026
Transcript: Dmel\ClC-a-RF
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General Information
Symbol
Dmel\ClC-a-RF
Species
D. melanogaster
Annotation Symbol
CG31116-RF
FlyBase ID
FBtr0113391
Feature type
mRNA
Associated gene
Dmel\ClC-a
Evidence Rank
Length (nt)
3613
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 8 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CTATTCAGTTTGACTTTAGACACTGCTCGACTCACATGCAGTCGGGAATTGAATTCGCAAACGGATTTCAAATACGGGAA
ATGAGCAAAAATATCTGTGCCATGGATGTGACGAAACCGTATCGATCCCATCTTTGATACGAGTAGTGCGCCATCGATTG
CGTTCAACTGCTATAAACCCATTAAAAACCCATTTGAACTGACAACAGCACAGTATGGTTTATTTCGGCGATCGGCAACG
CGATCGCAATCGCGATCGGAGTAATCAGAAAGTCGAGCGAATCATTCACGATGAAGAGTTTGGCGAGGAGAACGTCGAGT
TGGTGGACTCGGAGTGGGCGGACTTCGAGAAGTTCATTTGCCAGTTGCGCAAGCGGCGGAACAGTGCTATGTCCATGGAG
GAGGAACTGCGTCACGTGCAGCGGCATCCGAAGATCAAGTCGCACGCCTTCTATCCGTGCCCGCCGCCAGCTGAAAATGC
TCGGGATTCGGACTCCTCGGACGATGATGATCCCATCGGATACATCGATACTCTTATGTATGGTCGCTATACCAAAGATC
TAGGAGAATTTGCCAAGGATGAAGCCAGAAAGCTCAAAATACTCGAAAAGCGACGAAAGCAGGAAGATAAGCAAAGGAAT
AAGGAACTGCTGGGCAAACATTCGACCCGGGCGAAGCGGGTATCATCATGGATCTGGAGGCACACGGTGGCCCGACTGGG
CGAGGATTGGGTATTCCTGGCCCTACTGGGCATCATTATGGCCCTGCTCTCGTTCATCATGGACAAGGGCATATCCATAT
GTACAAACGCGCGAATTTGGCTGTATCGCGATCTGACGTCACAGCCTTTTGTTCAGTACATCGCATGGGTCTCACTGCCG
GTCTGTTTGATATTGTTCTCAGCCGGCTTTGTCCATCTCATCGCACCGCAAAGTATAGGTTCTGGTATACCCGAAATGAA
GACCATACTGCGCGGCGTTCAATTGAAAGAGTATCTCACATTTAAGACACTAGTGGCCAAGGTAATTGGTTTAACGGCAA
CTCTGGGCAGCGGTATGCCATTAGGAAAGGAAGGTCCTTTCGTACATATAGCAAGTATTGTAGCACAATTATTAAGTAAA
CTTGTCACATCATTCCAAGGCATATATGAGAATGAGTCGCGAAACTCTGAAATGTTGGCGGCAGCCTGTGCTGTCGGTGT
GGGCGCCTGTTTTGCCGCTCCAGTCGGTGGTGTGCTCTTCAGCATAGAGGTCACCACCACGTACTTCGCTGTGCGTAACT
ACTGGCGCGGATTCTTTGCGGCTGTGTGCGGCGCCACTGTCTTTCGGCTCCTGGCCGTTTGGTTCCAAAACGCGGACACC
GTCCGCGCCCTGTTCCTCACGAACTTCACCACCGAGTTTCCCTTCGATCCTCAGGAGCTGTTCGTCTTTGCTTTGATTGG
ACTTGTGTGCGGCTTGGGTGGCGCATCATATGTGTGGGTCCATCGGCGATATGTCCTCTTCATGAGATCCAACAAGCGGA
TGAACAAGTTCCTGCAGAAAAATCGCTTTTTGTATCCGGGATTCCTGGCTCTGCTGGTGTCCAGCATCTCGTTTCCACTG
GGCACGGGTCAGTTCCTGGCCGGCGAACTAAGTACCCACGAGCAGGTGACACAGCTTTTTAGCAATTTCACGTGGTCACG
AGATGATCTTACTGTGGAGCAGGCGGCTGTAGTGACCCACTGGATGACCAGTTACACCAGCGTCTTTGGCAACCTTGTCA
TCTACACCCTCTTTACGTTTGTGGTCTCCATTATCGCATCCACGATACCAGTTCCGTCGGGCATGTTCATTCCGGTTTTC
AAGATCGGTGCTGGCTTTGGTCGTCTGGTGGGCGAGTTCATGGCGGTGACATTTCCCCACGGCGTCCGGTATGGCGGTCG
TCTCTCGCCCATCATGCCCGGAGGCTATGCCGTCGTCGGAGCGGCCGCCTTTTCTGGCTCCGTGACCCACACGGTGTCTG
TGGCGGTGATCATTTTCGAGATGACTGGTCAGATTACGCACGTGGTACCCGTCATGATTGCTGTGCTGGTGGCCAATGCC
GTGGCGGCGCTGCTCCAACCGTCGATATACGACAGTATTATATTGATTAAGAAGCTGCCCTACCTGCCGGATCTGCTGCC
CTCCAGTTCCGGGATGTACAGCATATTCGTCGAGGACTTTATGGTGCGGGATGTAAAGTACATATGGCACGGCATCTCGT
ATCAGAAGCTCAAAGAAGTCCTCAAGCTGAACAAGACGCTGAGATCCTTGCCACTGGTGGACAGCCCGGACAACATGATC
CTGCTGGGTTCCGTGCAGCGGTACGAGCTGATCAAAATGATCGAGAAGCACATTGGACGCGAGAAGCGAATGGAGGTGGC
CCAGAAGTGGCAGAAGGAGGCTCAGGAAAGAGCCCTCGAGGAGGAGAAGAAGAAACAGGAAGTGGAGCTCAAGATGCGGC
GACCATCTCGATTCGAGGTCCTTCCAGCTCCGGATATTCTCAGTTTACGCCAGATTGCCAACGACGAAATGCTGCCGCCC
AAGAAAAGGGCGGAGACAATGCACGGTTCGCTGGCGCCCAGGAAGTCCATTTTGAAGAAGACCAACTCCTTCAACCTGAA
GACCTACGCGCAGCCCATGGGGCACAGTCCCAGCATCACGCCCTACACCACGATCACCGGCAATTCCGAGTTCCGCATTC
GCTCAGCCTTCGAGGCCATATTTAAGAAGTCCACCACGCTCCAGGACGTACAGCCGGATCCGGAAACGGGTTCCCTCTCC
CCGGCGGCAAGCAACCACGAGGTGGAGGTGCCGCGAACTCCTAGCACTCCCGGTGTTTCCAAAAAGGTTCAGCTGCCCAG
GGAACGTGTTATTGACATGTCACCGGAGGATCAGAAGCAATGGGAGCTCGAGGAAATGTTGAAGCCCATCGATTTGCAGA
AGGCCAATGTCCACATCGATCCCTCGCCATTTCAGCTGGTGGAACGCACCTCCATACTCAAGGTTCACTCGTTGTTTTCC
ATGGTGGGTATTAACCACGCCTATGTCACCAAAATCGGAAGACTTGTTGGTGTCGTGGGACTCAAAGAATTGCGAAAAGC
CATCGAGGACATTAATAGCAATAGTTTCGTGCCCCCCACACGGGATGAGGATGCGGATGAGAAGCCGGCGGTGGAGAAAC
CTCTGCTGTCGACGAACTCTAGTGATAAGGCCGTGGACATGACCGTCACCTCCATGGACTCGGCACTATCCAATTCCGAG
AACTGTTCGGACATTGAAATGGAGCACATAAAGCACACGGATAAGGGCACTGTATCGCTCACCATGCCGCCACAGGAATC
TAAGCAAAGTCCATCGGCGGACAAAAGTAACACAGAAAACGGAAATCATGCTTGAAACAAGATGATCGGCCATCATAATA
GTTAATACGATACGTATACGTAATATGTTTGTAAAGATCAGCTAAACACATCTATCTTAAGTTACGTCTTACACGAGTTA
GTCATCAATGTTATTATGTATTTATATCTCGTTAGTTCATAATGTGAAAAATATCGTGATTTATATTTAAGTTGAAAAGA
AAATCAAGTCACC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        ClC-a-RA
        FBtr0082526
        4353
        ClC-a-RC
        FBtr0082527
        3972
        ClC-a-RD
        FBtr0082528
        3994
        ClC-a-RG
        FBtr0300622
        4031
        ClC-a-RH
        FBtr0301023
        4444
        ClC-a-RI
        FBtr0334891
        4082
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        ClC-a-PF
        FBpp0112303
        1066
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        ClC-a-PA
        FBpp0082000
        1176
        ClC-a-PC
        FBpp0082001
        1049
        ClC-a-PD
        FBpp0082002
        1193
        ClC-a-PG
        FBpp0289849
        1018
        ClC-a-PH
        FBpp0290245
        1145
        ClC-a-PI
        FBpp0306912
        221
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG31116-RF
        ClC-a-RF
        Secondary FlyBase IDs
          References (0)