FB2026_03 , released September 17, 2026
Transcript: Dmel\side-II-RA
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General Information
Symbol
Dmel\side-II-RA
Species
D. melanogaster
Annotation Symbol
CG42313-RA
FlyBase ID
FBtr0299711
Feature type
mRNA
Associated gene
Dmel\side-II
Evidence Rank
Length (nt)
5214
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 15 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      GATTCAGTTGAAGCTCAGCCGTCGGACTGTTTTGAACGTGGTTTTGCAGGGATGCTGACGCTCGCTGCGGCAGCCATCGA
ATTAGCGAAGTTATCGGGTCTCGTCCTGCACACACACTCACACCCACCCACAAACGCTGAGAATCGGGTGCGCTGTTTCG
CGAATAAATATAATTCTCGTACCGCCAGAAAGGACCAATTATCGAAATCAATAAGAGCTAATTAGAATATACCTGCGCCA
ATTTGGTTAGGGTTTTGAACTGCATTGAGGTTTGCGTGCTGTTGGTTTTCCGAATAATAAAGGCAAATAAAATCATGCGA
CTCACTCAGCGAGCAGCTGATATTGTTGCACACACAAAAGGCTACACTACGGCTCCTCTTAGGCGATTTAATTGCCCTGT
TCTCGTTTCGGGCATACATTAAAACCAGCAACTAAGTATTTGCAAGTGGCCCAGTGTCTTCGTTGTGTGTGTGTGTGTGT
CTGTGTCCGTGTTGTTGTTGTTCGTGTGACCCGGTGTGTATATTCTCGTTACCGTGTGTTTGTTTGTGTTTTGATGGTCA
CGTGGTCAGTTCAAAGTTGGCTTGGCCCACTGCCTTCTTGTGCGTGACAAAAGTCAAGCAACAGTAGCAACAATAATATT
AGCAACAAAAGCAGCAACAGAAGCAACAGCAGCAGCAGCACCACCACCACCAAACACAAATAGCAACAACTGCAATAAAG
GATTATCCTGCGTGGGACAAATTTAAATTGCTCGCCAGCTGCTGCCACCGAGAAATGCAGAGACAGGAGAAAATCGAAAA
TGTGCTTCCATTAGAAGGACGGACGGAAAACTGAAACTGGTGAAGTTGGCGAGAAGAAAGAAAAACTGCAGCGCCAAATC
TGCAAACCAAATCCAACTTAAGTCACATCAAATTAAAATCAACAACCGGGCGAAGGTTGAACGGAGAACGAGAATCCAAA
AGGAAAATTATAAGAAAAATATATATATAAAGACAGTGAAGGGGGGAGATGAAGGGAAAAATGAAGTGCAATAAAAGTCA
AATGGCCACGTTAACAATGTGGAAAATTTTTATGGTCCTGCTTCTGGCCATGGCACTGCTAATGCCGGTCACATTAGCGC
GCCTGCATTCCACTTCCGGCGTAGGAATGTCCGGCGGAGGCAGCAGCATGGGTCCTGGCGGAGGAGGATCCGGCAGCGGA
GGCATATCCTCGAAGGATTCACACGTGAAAACGAAGGACATTGATGCCGTCGAGGGAAAATCGGTGTCGCTGCCCTGTCC
CATCACAGAGCCACTGGATAATGTGTATATGGTGCTCTGGTTCCGCGATAATGCCGGCATACCGCTCTATAGCTTCGATG
TGCGCGATAAGGAGAGTCGGGAGCAGCCACGACATTGGTCAGCCCCGGAGGTTTTTGGCTCACGTGCCAAATTCCATTTT
GACTCGCAGCCAGCAACCTTGGAAATTAAGCGACATGATCAGGGTATTTACCGTTGTCGTGTGGATTTTCGCACCAGTCA
AACGCAAAGTTTCCGTTTCAATTTGTCAGTAATAATACTTCCGGAGCAGCCAATCATCATGGACCGTTGGGGTCGTCAGC
TGAATGGTACTCAATTGGGGCCCAAGCAGGAGGGCGATGATATCGTTATCACTTGTCGTGTGGTGGGCGGTCGGCCGCAA
CCGCAAGTCCGTTGGCTCGTAAATGGACTGCTTGTCGACAATCAAAACGAGCACAATTCCGGCGATGTTATCGAGAACCG
TCTGTTGTGGCCATCGGTGCAGCGCAACGATTTGAATTCCGTATTCACATGTCAGGCACTGAATACGCAATTAGATAAAC
CCAAGGAGAAGAGCTTCATACTGGATATGCACTTGAAGCCTTTGGTTGTGAAAATCCTGGAGCCGCCCAGCTCGATGATT
GCCGATCGCCGCTACGAGGTGTCCTGCGAATCCTCCGGCTCTCGGCCAAATGCCATCATCACCTGGTACAAGGGAAAACG
GCAATTACGACGCACAAAGGACGACATATCAAAGAACTCGACACGCTCCGAGCTGAGCTTTGTGCCGACCACAGACGACG
ATGGCAAATCGATAACATGCCGTGCGGAAAATCCAAATGTGAATGGCCTGTATTTGGAGACCATGTGGAAATTGAATGTC
GTTTATCCTCCCTTGGTGACGTTACGCTTGGGCTCAACTTTGACACCGGATGATATCAAGGAAGGCGACGATGTTTACTT
CGAGTGTCACGTACAATCGAATCCTCAATGGCGGAAACTGTTGTGGTTGCATAATGGTATTCATCTGGAGCACAATACAT
CCGCCCGCGTCATTCGCTCGAATCAGAGCCTGGTACTCCAGAAGATTACGAAACACTACGCCGGGAACTATGCGTGCAGT
GCTATAAACGACGAGGGCGAGACGGTCAGCAATCAGTTGCCACTGCGGGTGAAATACACGCCCATGTGCAAGCACGCCGA
CCGCGTAATATTAATTGGCGCCTCTAAGGACGAGACTGTTGAGGTTGTGTGCGAAATTCAAGCCGATCCGCCGCCGCGGA
CTTTTCGCTGGAAATTCAACAACTCGGGCGAAACTCTGGACGTGGGCAGTGAACGATTCAGCGTGAACGGCAGCCGCAGC
ATTTTAAAGTACACACCAGTCACAGATCAGGATTATGGCACACTGTCATGCTGGGCCTCCAACGAGGTGGGCACCCAGCA
GCACCCCTGTCTCTTCCAAGTCGTGCTAGCCGCACTGCCGAATGCCGTCAGCAATTGTACCGTCTTCAACAGAACTGAAC
TGAGTGTTGACATACAGTGCATACCGGGCTATGACGGCGGCCTGCCGCAAATATTTGTACTCGAAATGTTTTCAACACGC
ACCGGCATCACCAGATTCAATTTGAGCAACGCCGAGGAGGCACTATTTTCGCTGGAGAACCTGGACACTCTGACCTCGAT
GATGGTCCAGGAGAATAATTCGCTGCGGCTGCGCATCTACTCGTATAACCAGAAGGGCCGCAGTGCCGCTTATCTGCTAA
CCGATTTCATAATTGGCTCAACAGCTTACAAGACAGACGACGATGTAACACTGACATTGTCGCCGGTGATTGTCGGCAGT
GTCCTGACCATCATAATTATTGGTGTGGCCATCGCGATACGAATATTCGTGGTGACATTTGTGCACAATTTGCGGCGGAA
TCGTCATCATGGCAGCAAGGCCACCGCCGCCGGAGTAACCGCCCAGCCCAGCGATGTCTTCAAGGGCGGCAACTTGGAGA
AGCCGCGATGGCAGCACACGGACATAAAAACGAAATCATCAGAGGATTTGGTTGAGGACGAACGTGATCCGGATGTAATA
CCATCGCAATACGTCGGTGGGAGCAGCGCCGGCAGCAGTGGCAGCAATGCCTCCAACGTGGGCAGCACCACCGCTGGCAC
CGCCACCGGGAGCAGCACCTCCACGGCGGTGGTGGCCAACGCCAATGCGGCCGCGTCAGCGATGGCTGGACCGGGAGGAG
CCACATCGTCAGCATCTGCCACAGATGGACATCAGTTTGCATCTGGCACAGCGGCGGCAGGAGGCGGGGCCTCCAAGTGG
TCACCCAATGGCAATGTGACGACGACGATGCTGACCGGCGATGCGGTGAATGCAACTGTCACCTACAATCAAATCAACGC
GCAACGGGCGCAGCTGTTGGCGGCGGTGGCTGCAGTGGGCGGTGGATGCAGCAGCACCGTAATCTCGCCCAGCAGCAGCA
TACTGGGCGGTCTTGGCAAGCCGCTGGGCATGGGAATGGGCATGGGCCTGGGCATGGGAGTGGGTGGCACGGTCATCGGG
TCGCCCACGTCGCTATCGTCGACGGCCACTTTGGCAGCTCACCTGCAGCCGGCGCACAGTAGCGGAGTGGGCACATTGCC
ACCGGGACTCGGAAGCGGCGGTGGCTACATACTGAACGCTTATGCCAGCGGGCGCCTGCATCATCCACCTGGGGGTGGGG
TGCCAGGCGGAGCGACTCACACCGCCACACTGAACAGGCATCACCACCAGCAGCAGCAGCTCCACCACCACCCGCACCAC
CAGCAGCCACACCACTCCGGCTCAAGTCTTTTGATGGGAAGTGCTGGAAGCGTGATGGGCGTTGTGGGATCCACCACGAC
AGCCACAACCTCGTGTAACTCCTCGCAGGATCTGGACGATAACATCAATATAAATGCGATTAAGGACTGCCTCATGACGC
AGCGAGTGCCCGAGAGTTGTGTCTAAGTCCGAGGGCTGGATACGACAGATTCGGATGCATGTATTTACTTTGCAGGAATA
TCAATCTATGTCAGACAGGACTGTGGAAGTTTTCAGATTCATTTAAATCTTTAAAAAAGTAATAATTCCTTATTATTTAT
TGAAAAAGTGTAAAATATGTAACTACGTTAATTTATGTGGCTTGTATTATTTACTTTAGATCCCAACACTTCATTTAACA
CCTTTCTAGGAATATGAAAACTGAAATAGGCCTGTTTTCTTCTCGTTAAGGTGCTGTGCATATATAACCATATAATAAGT
GCAAGTGACAGGAAACATCATATCTTCTGATTCAATAGCATATCCCTTGTTATATCAAACTAAAACAGATGGAGTGAAAT
ATCAATTTCGATATATTTTGAAAGCAAAATTGGCTCAATGCCTGGCATTTGCAAACATGAAACTTGCTAACCGAATTTGA
AGATGTATATTTCTTTCCCAACCAATATTGGATATAGTTAACTGGATTAACATCATTTTACAACACAGTTAAACACACAC
TCTAATTTAAGGAAACTTCAAAAAGACTCAAACGATGTAGTAGCTAAATATTTTGTAGCTAAAATATTTTCGAAATGAAA
AGTAAACAGCATAGGAATACTTGTATATAAAATATATATACGTGGCATAGTGAATAGGTAAATTGTATAAAAAGAAAAAT
GGCAAGCACACCTAAATATCATTTGTTGTTGTATATAAATATGAATGATTGTAAATTTATCAAAGTTTATGTTTGAGTCG
CCGTCTAAATCGGCAAATGGTCCTGCTTAGAGCTACAAGAAATATTGAAGTTAAATGTTTAGAAAGGAAAGCGCTAGATT
AAGATACATTAGATCAAAGAAATTGAAAGAGTTTAAACTGTGCTAGGCTAACAGAATTACGCGTAAATATCAATAAATAT
GTTAAGCTAAGTCG
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      side-II-RB
      FBtr0345431
      5298
      side-II-RC
      FBtr0481630
      5223
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      side-II-PA
      FBpp0288989
      1064
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      side-II-PB
      FBpp0311556
      1064
      side-II-PC
      FBpp0428412
      1067
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG42313-RA
      side-II-RA
      Secondary FlyBase IDs
      • FBtr0080680
      • FBtr0091457
      References (0)