FB2026_02 , released June 18, 2026
Transcript: Dmel\Mp-RN
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General Information
Symbol
Dmel\Mp-RN
Species
D. melanogaster
Annotation Symbol
CG42543-RN
FlyBase ID
FBtr0301958
Feature type
mRNA
Associated gene
Dmel\Mp
Evidence Rank
Length (nt)
5126
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 25 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CAGTTGCGTTCGCGTTTTCCAGCAGTTCAGATGGCCACGCGGCCGGTTAAAAGATGAGCCTATCGTTGCTGCCGTGCGGT
CGGTACTCGTCCTCGTCCACGTCCATATCCACATCCTCGTCGTCTTTGTCGTCTTCGTCCTGCTCGTCTTCGTCCTGGTT
TTCGGACGTCGTGAGTGCGGTGGCAGCTGGCACTACTACTACCAATACTACTACTGCTACTTCTGCCGTAGCTATTATAG
CCCCAAAAACAACTGCAAATGATGCCCTTGTGCTGGCTTAGCCGCAAAAAATGAAAGTGATTTATATGGCCAAATGAAAT
ATGCTCGCCTAAGTGAACCGACCGGCCCGGAATCGAGTCAATTAAAATTCAATTATGCGACCAAAGATGAAGGAGAGGCC
GCGTAAGCGTTTGAAAACCGTTCGACCGCTGAACTCCTGACTGAACCGGAAGTTTAAACTGCCATTGTAGTGTGTTCCCC
CAAGCATAATCCTAGCAATCGATCATATCACAAGCGGATAACTGAGTACATATCGTGCAACAAAAACTGGGTTAAGTCTC
AGACTTGCGAGACTTATCAACGGCAAGGATATACGCCAGATATCAAAACTGCAATTACTTTTATCCTTGTTCTGCTTGTT
ATCGTCGTCGTTTCTTGTCTTCGCGTTGCGATTGCCGGTTGTAAAAGTTCAAGAAATAGTGGTGGAAAACAAACGAATAT
AAACCCAAACACTGTCCAAAACCCCCACCAAAAACTCCACTCAGCGAGCTTGTTCGAATGGAAATCAATCAATTGCACAA
TGCCAGAATGCAGGCGGTGTGAAAAAGTGAATTAATTGCACAGCACGACGTCAAAGCTAAGAAACATAACGAACAGCAAT
TTAACCATAAAGAATAAAAATTACAAATAAAGACCCCACATGACACGACTGTCATTTGTAATTACAAATGAGTATGAAAA
AATGGGCATACATAATTTACAATTACTATAAATTTTAAAGCAAAACACACATACCTATAAATACAGCAAAGTATTTGCAA
TTAAATTATCTGTGATTTTTGTCAACATATTAAATATTTTGCGTGCGCGTGATTAAACCCCATATTTCGTATTCGAACCC
GTATACCATCATTTAAAGTGAATAGTTGTGAATGGTCCCAGTGCGTTCGGCTTAAAGGCAATTCTATTCGTCGCCGGTTG
TTTGTTGTTGTTCATTTCGTTTGGCGTTGATTTCTCGTAGTGCTTTAAGTGTTGTATATCGAATTGGTGTTGAATCGGAA
TCGTGTAAATATCGTACAAAATGGCAATGGTTATATCGACGCGTGCCAAGCTCGTGATTACCGCGCTGATTCTGTTCTTC
CTGCTCGGCATCGTCCTCGTAACGGGCTCCACAAAGGGATGGTTCAATCCCAACCGCTACAACGGCGAAAGGGTGGCAGC
TAGGATTCAGGCGACAGACATCTTCGACGCCAGTGGAATGCAGCCCCCGGGACAGACGCAGTACACGCACGAGAGACCGT
ATCGCGGCATCAAGGGCGAGAAGGGAGAGCGGGGGCCCAAGGGCGACAGCATTCGCGGTCCGCCGGGACCGCCGGGTCCG
CCAGGACCCAAAGGCGAAACGGCCCCCTATCCGCCCTTTGTGGAGACGACGAGTGCGGGGGCTAAATACACTGGCGAGTG
TACATGTAATGCGTCTGATATCCTAGAGGCCATCAAGGACAATGAGTCGTTGCGGGAATCGTTGCGAGGAGCACCGGGCA
CGCCGGGCAAGGATGGAAAGCCAGGTACCCCTGGACACACCGGAGCCACCGGAGTGCCTGGAGCCAGAGGCGCCCGGGGG
TCCGAAGGTGCCCAGGGGCTGAAGGGCGAGCCAGGCGTCGACGGGCTGCCCGGAGTCATGGGTCCGCCGGGACCACCGGG
CCCGCCTGGTTTGCCCGAGAATTACGATGAATCCCTAATGGTCAACTCGATGGGCGCATTCCGGGGCACGACGCAGCCAG
GAGCCAAAGGTGTGCCCGGCGAGAAAGGTGATGCCGGCCAGAAAGGAGAGCGTGGCGATCCGGGTCACAAAGGTGCACAC
GGGCCCAGCGGCGCAAAGGGTGAGCCTGGCGAACCGGGAACACCCGGACTGCCGGGATTGCCCGGACAGGTCGGACAGCC
CGGCGGACTTGATGGCCTCGCCAGTGCCAATGGGACCAAGGGCGAGAAGGGCGAGAAAGGCGAGAAGGGCATGCGGGGTC
GGCGCGGCGGAACGGGTGCCACTGGACCAATTGGACCGCCCGGAAAACCCGGACCCATGGGCGATATTGGACACTCGGGT
CGTCCTGGCATGACAGGACCAAAGGGTGAAATGGGTCCCAAAGGACCAAAGGGTGATTCCGGCGGACGCGAAGGGTTAAA
GGGTGATAAGGGAGACCGAGGTCAGGATGGTCGCGATGGCTTGCCAGGACCTCCAGGATTACCCTCTACTGGTGGAGGCG
ATGGTGACAGCGGCGGCGTGCAGTACATACCAATGCCAGGACCACCAGGACCTCCGGGACCGCCAGGTCTGCCGGGTCTT
TCCATTTCTGGCCCCAAAGGAGAACCCGGAGTGGATTCGCGAAGCTCCTTCTTCGGCGATGCATCCTACTACGGACGACC
AGAGCCACCGCGCCAGCCAGGACATTCCCACAAGCATGAGGAGACCCTGGGGCTTGTCGATGGCGAGGAACCATACTTCT
CGGCATCCTCATCGAACATGAACATGAAGATTGTGCCCGGCGCAGTCACCTTCCAGAACATCGATGAAATGACAAAAAAA
TCGGCCCTGAATCCACCGGGCACATTGGCCTACATCACCGAGGAGGAGGCGCTGCTGGTTCGCGTAAACAAGGGATGGCA
GTACATTGCGCTGGGAACTCTGGTGCCGATTGCCACGCCCGCTCCGCCCACAACGGTGGCACCATCGATGCGATTCGACC
TGCAGTCGAAGAATCTGCTCAACAGTCCACCACCCCTTCTCAATACGCCAACGTTTACAACCGCGCCCGAATACGAAACG
TGGTATCCGCGAATGCTACGCGTGGCCGCACTGAATGAGCCCTCCACTGGCGATTTGCAGGGGATTCGCGGGGCGGATTT
CGCCTGCTATCGACAGGGACGACGGGCAGGACTCCTGGGCACCTTCAAGGCATTCCTCTCATCCAGGGTACAGAATCTGG
ACACCATTGTGCGTCCGGCTGACCGGGATCTGCCCGTGGTGAACACTCGTGGCGATGTGCTCTTCAACTCGTGGAAGGGC
ATCTTCAATGGCCAAGGTGGCTTCTTCTCGCAGGCGCCGCGAATCTACAGCTTCAGTGGCAAGAATGTGATGACGGATTC
TACATGGCCCATGAAGATGGTCTGGCACGGCTCGCTGCCCAATGGCGAGCGTTCCATGGACACCTACTGCGATGCCTGGC
ACTCGGGTGACCACTTGAAGGGCAGCTTTGCCAGCAATCTCGATGGCCACAAGCTGCTCGAACAGAAGCGCCAGTCCTGC
GACAGCAAGCTGATCATCCTGTGCGTGGAGGCACTCTCGCAGGATCGCAAACGCAAGAAGCGGGAAATCGGTGATGGCAG
CAGTCACGGCGAAAGTGAAAGTAGGGAGTTCAAGACGGCCGATGAGTATGCAGCGCATTTAGAAAATTTACTGCTGTAAG
CGGAAACGGAAGGAAGAAGAGGAGCGGCATCACACCGAACACATTCTCATGCATAAAACAAAACAAATCACAGCACACAC
CCACACACAGACACATGCGTGCACACATTGAATGTCAACGTGAATCATGGCCATGCATATAATCAGCGAATTCCAAACAA
AAACCAAAAAGAGAAATACTCAGACGGCAGATGGATGTTGCATATAAATACATACTTATATTACCAGTACGCATACACAC
TACTCGTAGGTAATATGTCTAATATATTGCTAAACGTATATGATAAACACAAATAGATATATATCATGGATATATATTTG
AGTTGTACTTTATGTTTAGGACACGGCACGAGCAAGCAGCAATTTTTGTACAAGCAGGAAACGTATTTGTAGTTTGTAAA
CTGTAATTTGTAACTTACCGATAGCCGTAACCGAACTAATATCTAATTTTGTAATTACCTAAGCTCATCATTCACAACAA
AAAAATAAGAAAATAAACAAAGAAAAAAAAAAAAAAACAAACAGCAGCGGAACACCCAGTCGCCTCCGCCTACGCAATAC
TGGCCAAATTAGTATCCTACTTAGATTTGTATGGCAATGCACCCGAGAATCGAGAATCGAGCAATTCGAAAAGCGAGCAA
CTCTTCACAGGACCCTGTATATGCGTGTATAAATGTGTATTTTTGTCAAAAGACTTCTAGGTGTGTGTACATTATAAGAA
AGCCCCGCGTGGTTACTATACGAAAACGTTTTTAACTATCGCATGCAGCCCTTTCTGCCCAGTCTATATACGATATATAT
ATCTGAACTTTATATAGGATATACATATGTGTTTTACGACCGATTTCTACTGTACTCCTATCTTAGGCCAGAGATTTTCT
ACAGCGTAGCTCGCGATTCACCACAATACACGTTATCGAATTCCGAATTGCATTTTCGGATCGCGCAGTTCTTTTATATG
CATCAGATGAGTAACGATAATGAAATTATAGCATAATCAACACACATAAGTACATACACAGCCGTGGATGGTAAATTCGT
AATTTATTGTCATTCGATAACGAACACTTAACTAAATTCTAATTATAGTTACCGATAGTTAGTTACGTAATAATTTCTTT
TTGCATTTAACCAATGCATTTCCAACTACAACATTTGTAATGTAATTAAACGTAATTGTAATGACAGTTAAGGTATTAAT
TTAAAACAATAAACCACAAACGCAGAACACAAAGCGAATGGCGCGTTAGCCAATCGCACGGTGACATTATATAGTACGAT
TAAAGTAATATAAATTTAGTGAAATCAAAACTGAAGTGCAGAACCCTCTAGTCCTAAGCGTAAAAACACGAAGAGAAGAG
AAAAGAAGAGCAGAGAGAGTGCATAACAGAGATACATAATAGCATAATATAATTGAATAATATGAAACAATAAAAAGTAA
ACTATC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Mp-RB
        FBtr0301105
        3906
        Mp-RE
        FBtr0301106
        4140
        Mp-RF
        FBtr0301107
        4167
        Mp-RG
        FBtr0301108
        3956
        Mp-RH
        FBtr0301109
        4245
        Mp-RI
        FBtr0301110
        2577
        Mp-RJ
        FBtr0301111
        3103
        Mp-RL
        FBtr0301113
        3800
        Mp-RM
        FBtr0301114
        3938
        Mp-RO
        FBtr0306638
        3901
        Mp-RP
        FBtr0308094
        1145
        Mp-RR
        FBtr0309957
        3974
        Mp-RS
        FBtr0339903
        5162
        Mp-RT
        FBtr0339904
        4897
        Mp-RU
        FBtr0339905
        4750
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Mp-PN
        FBpp0291170
        792
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Mp-PB
        FBpp0290327
        1008
        Mp-PE
        FBpp0290328
        778
        Mp-PF
        FBpp0290329
        787
        Mp-PG
        FBpp0290330
        1023
        Mp-PH
        FBpp0290331
        813
        Mp-PI
        FBpp0290332
        257
        Mp-PJ
        FBpp0290333
        579
        Mp-PL
        FBpp0290335
        971
        Mp-PM
        FBpp0290336
        1017
        Mp-PO
        FBpp0297593
        1013
        Mp-PP
        FBpp0300437
        229
        Mp-PR
        FBpp0301686
        1039
        Mp-PS
        FBpp0308935
        804
        Mp-PT
        FBpp0308936
        1022
        Mp-PU
        FBpp0308937
        973
        Comments

        Extended 3' UTR based on RNA-Seq and EST data.

        Transcriptional initiation site supported by short-capped RNA data (FBrf0209722).

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (3)
        Reported As
        Symbol Synonym
        CG42543-RN
        Mp-RN
        mp-RN
        Secondary FlyBase IDs
          References (0)