FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\cnn-RJ
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General Information
Symbol
Dmel\cnn-RJ
Species
D. melanogaster
Annotation Symbol
CG4832-RJ
FlyBase ID
FBtr0309889
Feature type
mRNA
Associated gene
Dmel\cnn
Evidence Rank
Length (nt)
4830
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 41 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CCGTTTTGGCTACACACACGAGCATTAGCACATTTATTCGGCCGCACTGTTGGCGTTTTATATTTTATATGTGGTTGCTC
CCTAACGGCTAGGAGAAAGCTATAAAATCATGAATAGTAATCGAACGTCGTCTTCGCACAATTCGAGAAATCTAAAGATT
CTTAATGCCAGTTTTGACGTTCCACGACCTCCAGGCGGCGGCAACTCGCCCTTGCCGTCACAGGGTCGCTCTGTACGCGA
ATTGGAGGAGCAGATGTCCGCGCTGCGCAAGGAGAACTTCAATCTAAAGCTGCGCATCTACTTCCTCGAGGAGGGTCAGC
CGGGTGCCCGGGCAGACAGCTCCACAGAATCCTTAAGCAAACAGCTCATCGATGCCAAGATCGAAATCGCGACATTGAGA
AAAACTGTCGATGTAAAGATGGAGCTGCTCAAGGATGCCGCTCGAGCCATTTCTCATCACGAGGAATTGCAGCGCAAAGC
AGACATTGACAGCCAGGCAATAATCGACGAGTTGCAAGAGCAAATACACGCCTATCAGATGGCGGAGTCTGGTGGTCAAC
CTGTCGAAAATATTGCCAAAACCAGGAAAATGTTGCGCCTTGAATCGGAGGTGCAGAGATTGGAGGAGGAACTGGTGAAT
ATCGAAGCTCGTAACGTTGCAGCCCGGAACGAGCTGGAATTCATGTTGGCCGAGCGCCTAGAATCCCTAACAGCCTGTGA
GGGCAAGATTCAAGAGCTGGCCATCAAGAATTCCGAACTGGTAGAGCGTCTTGAAAAGGAAACAGCATCCGCCGAGTCAT
CCAACGAGGCCATAGACTCTCTTAAGGTTGAATTAGAAGCCTGTAGGAAAGAGAATCAGGATCTGGTGACCTCCATTCGA
ACCTTAAAACATGATATGAAGCGACAAGTCCGCTCGATGAAGGAGGCCGCCAATACGATGGACGTGCAGCGTCAGTCCAT
CCTGCTCTTGGAAGCCACAATCAAGCGCAAGGAAAAGTCGTGCGGAAGTATGCAGAAGAACGTGCTAAACTATGAGGCAC
TGATAGCCAAGTTAAACGCCGAACTGGAGACTATGAGGCAACAGAATGTTTACTTCCGTGAGCTCTCCGAAAACCTACAA
CAGAAGGAGGTGCGGCAACTGGATCGCGGCGTGGCCATCGTGCAGCCGATGCGCATGACGGCGGATGCCGGGCGTTTTGT
GTGGCAGTCAGGGACCATCGTCGCACAAGAGCCTTTGCCATTGGAAAGGCAGTCAGCTGCAGCAACAAGCAACGTATCCG
TGTCCGCAGTACGTTTATCATCAGGGCCACCACCAGACCAGACATACCCAGTTAATGGCCATGACCGCGCCAAGTACGGC
CTTCTACAACTATTCGCTGCCAAGCTTGACTGGATTTCGGCAGTTCCTTTGGCGCTGGGGCACTTAGCCCTCAAGATCAT
CCTCTTGGCTATGCGGTTGCACTCCTGCCTCCAGAATGTCCATATCCCTCTTAGGGCCAATCGAGATCTGGGCGCCCAAC
TGGCGGATAAGATTTGCGAGCTGCAGGAAGCCCAGGAGAAGCTCAAGGAGCGCGAGCGCATCCACGAGCAGGCATGCCGC
ACCATTCAAAAGCTAATGCAAAAGCTAAGCAGCCAGGAGAAGGAGATAAAGAAGCTCAACCAGGAGAACGAACAGTCGGC
AAACAAGGAGAACGACTGCGCTAAGACGGTAATTTCGCCATCCTCCAGCGGCCGTTCCATGAGTGACAACGAGGCCAGCT
CCCAGGAAATGTCCACCAACCTCAGGGTGCGCTACGAACTAAAGATCAACGAGCAGGAGGAGAAGATCAAGCAGTTGCAG
ACGGAAGTAAAGAAGAAGACGGCGAATCTGCAAAATCTGGTCAACAAGGAGCTATGGGAGAAAAATCGTGAGGTGGAGCG
CCTCACTAAGCTGCTGGCTAACCAACAGAAGACGTTGCCACAGATAAGTGAGGAATCCGCCGGAGAAGCAGATCTGCAGC
AATCCTTCACGGAGGCGGAGTACATGAGGGCATTGGAGCGAAACAAGCTGCTGCAGCGAAAGGTGGATGTGCTCTTCCAG
CGCCTGGCAGACGATCAACAGAACAGCGCTGTGATTGGGCAGTTGCGTTTGGAACTTCAACAAGCTCGCACGGAAGTCGA
GACGGCGGATAAGTGGCGTCTTGAATGCGTCGATGTCTGCAGTGTGCTGACAAACCGATTGGAAGAGCTGGCTGGTTTCC
TCAACTCTCTGCTGAAGCACAAAGATGTTCTTGGCGTGTTGGCCGCTGATCGACGCAATGCCATGCGTAAGGCGGTGGAT
CGCAGCTTGGATCTTTCCAAGAGTCTTAATATGACTCTGAATATAACAGCTACATCCTTGGCTGATCAAAGCCTCGCTCA
GCTGTGCAATCTATCCGAGATCTTGTACACCGAAGGTGATGCAAGCCACAAAACTTTCAATTCCCACGAAGAGCTGCACG
CCGCTACTTCGATGGCTCCGACTGTAGAGAACTTAAAGGCCGAGAATAAGGCTCTTAAAAAGGAGTTGGAAAAGCGACGC
AGCTCAGAAGGACAGAGGAAAGAGCGCCGCTCCTTACCGCTGCCCTCCCAGCAGTTCGATAACCAGAGCGAGTCAGAGGC
CTGGTCAGAGCCTGACCGCAAGGTTTCCTTGGCACGCATTGGCCTGGACGAAACCTCCAACAGTTTGGCAGCGCCTGAGC
AGGCGATCAGCGAGTCGGAGAGCGAGGGAAGAACCTGTGCTACCCGTCAGGATCGCAATCGCAACAGTGAGCGTATTGCC
CAGCTGGAGGAGCAGATTGCCCAGAAAGACGAACGTATGCTTAATGTGCAATGCCAAATGGTGGAGCTGGACAATAGATA
TAAGCAGGAGCAATTGCGCTGCCTCGATATTACTCAACAATTGGAGCAATTGCGTGCTATCAACGAAGCTCTGACTGCAG
ACCTGCATGCTATAGGATCACACGAAGAGGAACGCATGGTCGAGTTGCAACGCCAGCTGGAGCTTAAGAACCAGCAGATT
GATCAACTAAAACTGGCCCACAGCACTCTGACGGCAGATTCGCAGATAACCGAGATGGAGCTGCAGGCGTTGCAGCAGCA
AATGCAGGAAATAGAGCAGCTGCACGCCGATTCAGTAGAAACCCTGCAATCCCAGCTACAGAAACTCAAACTAGATGCCG
TGCAGCAGCTAGAAGAGCACGAGCGCCTGCATCGCGAGGCTCTTGAACGCGACTGGGTGGCACTGACCACTTACCAGGAG
CAGGCTCAACAGTTGTTGGAACTGCAACGATCCCTGGACTATCACCAAGAAAATGAGAAGGAGCTGAAGCAGACGCTTGT
CGAGAACGAGCTGGCCACGCGGGCCCTCAAAAAGCAGCTAGACGAAAGCACTCTGCAGGCCTCCAAGGCGGTGATGGAGC
GCACAAAGGCCTACAACGACAAGCTGCAACTGGAGAAGCGTTCCGAGGAATTGAGGCTGCAACTGGAGGCGCTCAAGGAA
GAGCATCAAAAGCTGCTGCAGAAGCGCTCCAACAGCAGCGACGTTTCCCAGTCCGGTTACACATCCGAAGAGGTGGCGGT
GCCCATGGGGCCACCTTCGGGTCAGGCTACAACGTGCAAACAGGCTGCTGCCGCAGTTTTGGGCCAGAGGGTGAACACAT
CATCTCCCGATCTGGGCATAGAAAGCGATGCCGGCAGGATATCTAGCGTAGAAGTATCCAACGCCCAACGTGCGATGCTT
AAGACTGTAGAGATGAAAACGGAGGGATCAGCGAGTCCAAAGGCAAAGTCAGAGGAATCTACATCACCGGACAGCAAGAG
CAACGTGGCAACTGGTGCAGCCACAGTACACGACTGTGCCAAGGTAGATCTTGAAAACGCCGAGTTGCGGCGCAAACTAA
TCCGCACCAAGCGCGCATTTGAAGACACCTACGAAAAGTTGCGTATGGCTAACAAAGCAAAAGCACAAGTTGAGAAAGAC
ATCAAAAATCAAATACTAAAAACGCACAATGTGCTGCGAAACGTTCGCTCAAACATGGAGAATGAGTTATAACGATCGCG
CCGACGTCCAGTATATCAGCATTAACCCGAGAGGCCATTCACCCAATGTTCAATTGCCATTTCTTGCCATTCTTATATTT
TGTATGCATTGTATTTTGTTGTCTCGTTGCTAACTTGATATCAATTATTTATGTGTTTTCTTCTATTTTTTTTTTTTGTT
TAAAAAGACCGTAAACAACGAAGCTATTAGTACGAAATACCCATGCATTTTCTAAAGACTGTTGAGGGAATCGAACCCAT
TGAATGAACTATCACACACACACACACACACACCTGTTTTAAGCACAAAACGAAACTAACTTGAAACTTGAAGTGCTGAA
AATATGTATCTAACCCGGCGCACTCATTCATATTGAATGACACATGTATATTAGAATGTATATATATATATATCCCCTAG
TACCATAACTTTAACGAATATTCTCTAGCATACTCGACCTGATTCTTGTCTCGCATAACCCTCCATTTTCCAATCATTTG
CGTGTAGTGACTGCCTGATTAATGTATTCTCCTGCTGCTTAACTGCTCTTAATCCTTGATTTCAGTTAACCATCGAAACG
GATATTGAAATAATTGTTTGACTTGCCGGACAAAACAGTTTAGCTACGTTGCCATCCAATAACCCTTTTTGTTCGAAACA
TCCATTTGTACAATGTGTAAAAAGTAGTGTGCGTTGTCCTGGAGAACAAGATCTAGAACTTAAGTCATTTGTACCCGTCG
TTTTATGGAATAAACAATTGCGTTAGAATT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          cnn-RA
          FBtr0087703
          4322
          cnn-RB
          FBtr0087704
          4621
          cnn-RD
          FBtr0100654
          4140
          cnn-RE
          FBtr0100656
          4651
          cnn-RG
          FBtr0301395
          1709
          cnn-RH
          FBtr0306635
          1824
          cnn-RI
          FBtr0309888
          1769
          cnn-RK
          FBtr0309890
          2006
          cnn-RL
          FBtr0309891
          5012
          cnn-RM
          FBtr0309892
          4399
          cnn-RN
          FBtr0309893
          4310
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          cnn-PJ
          FBpp0301623
          1320
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          cnn-PA
          FBpp0086822
          1148
          cnn-PB
          FBpp0086823
          1120
          cnn-PD
          FBpp0100116
          1090
          cnn-PE
          FBpp0100117
          1130
          cnn-PG
          FBpp0290609
          480
          cnn-PH
          FBpp0297590
          462
          cnn-PI
          FBpp0301622
          500
          cnn-PK
          FBpp0301624
          520
          cnn-PL
          FBpp0301625
          1378
          cnn-PM
          FBpp0301626
          1120
          cnn-PN
          FBpp0301627
          1120
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          Corresponds to cnn5c described in FBrf0208637.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          cnn-RJ
          Secondary FlyBase IDs
            References (0)