FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\cindr-RJ
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General Information
Symbol
Dmel\cindr-RJ
Species
D. melanogaster
Annotation Symbol
CG31012-RJ
FlyBase ID
FBtr0310424
Feature type
mRNA
Associated gene
Dmel\cindr
Evidence Rank
Length (nt)
4440
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 65 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TGGTTGTTGTAGTTGTAGTGGGAGTTCGTCGGCGTGTTTGCGTTTCGCTCGCTCGTTTGGCGATTTGCTGGGATTATATT
TGCCCGTTTATTTTGTGGCAAAAGCGCATTTAATTCGAAGGAAGTGAGTAGTGAGTGGCGAAAAGCGGAGACGCACTGCC
GCGCTGGAAAGGCGGAGTGAATTGAGTGCATGCGAATGCGTGTGGAGAGCAAATCGAAGTGCAAGTGCGTGCCAGCGAAT
AAGAAGAAGTGCGAAGCCGAAAAGGAAGCGAAGCAAGGTGGGCAGTGAAAAGTGCAACGAAAAACGGCAGAGGAAACTGC
AATAAATCAACAAAAAAAAAAAGGAAAATATTCTACGTGACGCGAAATTAAATGCGCTCGCTCCTTCTCGCTCGCACGCG
CGCCCCGTCTCTTACTCTTTGTTGAAATTTAACTGCGAGCAGAACAGGGTCAAAAAAAAAAAAAAAATAAATAAAATAAA
AAACACGTCGAGAAATACTCGTGTATATAGAGTTCTAGGTAATTCCTACCTTCCGTTTTTCGCGGTTAACGCGCGTGATT
CATAAACCCGTCTTCAAGATACGAAACCAAAAACAGAAAACACAGCGTGCATTGAACCTGCTGGAAGCGCTGGCCACCAG
GAATCGCTTCAATCATGGAAAACAACATCTGTGCAATAGTCGAATATGAGTACGCGGCCAAGGAGCCGGACGAGCTGGAT
CTCCAGAAAGGTGCCATTATCCATCGGATCAAGCAGATGCCCGGCGGCTGGTGGCAGGGCACCCTGAAGGCCTCCGGCGT
AACGGGGATGTTTCCGGATAACTTTGTGCGCGTGCTGGAGTCCGGAGTCAGTAGCAATGGCAACGGAACCACTGGCAGTG
GCGACCACATCGAGGTGGGCACCGCTGTGCAGCTGAGGGACAAATCCGCGACATCGAATCGCCGCTGCAAAGTCATCTAT
AGCTACACACAAGTCAACGACGACGAACTGACGTTGGCCGTGGGTGATGTCATTGAATTCCTAGGGGAGGTCGAGGAAGG
CTGGTGGCGCGGTCGTCTGCGCAGCAAAGTCGGCGTCTTCCCATCGAACTTTGTGCAACATATCGAGCCGTCTCCCGTTT
TGGCCTCCAAACGGCCACCGACAATTGGCGCCACCGTGACCACATCGGCGCTGACGTCCAAGGCGGCCAATGTGGCCAAT
GTGGCAGCCACAGCCACAGTACCAACCGGCGGAGCAGTGCCTCCTGCGTCCACCAGCATCTCCACCTCCACAACTAAGCA
GGCAACGAAGAGCAGGGCAACTGCAGCAGCAGCAGCATCTGCTCCAGCGGAGCCGGCGGCCATAGTTTCGGGATCGGGAG
CAGCAGCTGGTGGAGGAGCAGCGGCAGCAGTGCCCATGTTGCCACCCAAGCCGCAGCGGGAGTTCTGCCGGGTGGAGTTC
CCCTACGCCCCGCAGAACGACGATGAACTGGAGCTGAAGGTGGACGACATAATCGCAGTTATCAGCACGGAACTGCCCGA
TAAGGGCTGGTGGAAAGGAGAAATCCGCGGCAAAGTGGGCGTCTTTCCCGACAATTTTGTCAAAATGCTGGCACCTTCGG
AAGCAACAGCAGCTCCACCGTTGCCACGGCCACGCCCACGCACCCGGCCTGGAATGGGCGGAACGGGAGCCGGATCCGGG
TCCGGAATTATAGATGGGGTCCGTACTCCACGGCGGACGCAGCGAGGCGGCTCTTTCGAGTTCTTGGGCGCGCGTATGGC
CAGCTTTATCACCACGATTTTTGCACCGATCAACGAGCCACCGAGTGCCACACAGATTACGCAGAATCAGAGGAAGGTCA
GCAACACCGCCAGCACCACCAGCCACATGACCACAACGAACTCAAGCAATTCCAGCACCACCTCGGTGACCACGCAGCAG
CAGAAGGAGCAGATCGGAGGCAGTTCCTCCACCACATCGAAGGTGTACATCAAGAAGACCGGGAGCAGTAGCAATAGCAC
TACCAGCAGCACCACCACAGCTTCCTCTTCGGCGGGTCGCAAGGAGAGCTTTGGTTCCCGTGACTCCCTGAACGATATCC
TTAGTGAAACGGGTCTGCCCACCGGCAATGTGGCTGCCCAAAGGAAATCCCTGGAGAACAAGAACCTGGACCTGACTAAG
CCACCTGGAGTGGGAGCATCAGTGTCCATTGGACAGCAGCGGAGCAGCACCTCTAGTGCCACCACCTCCTCAGCCACTAC
AGTAGCCACTGGACTAACCTCATCATCAGTGAGCAAGTCCATGGAGAACATGCTGGACGAGAAGGTCAAGTCGCCACCAC
CGCCGGTGCTCAGCAAGAAGCCCAGTGTGCCGCTCAAGAAAACTCCCACCGGCGGAGTTCCTATGACTGGTAACCTTTTG
GGCGGCAAGAAAAAGAATACCGAGGGAAAGCTCACCACTGCCGTGTCCCATGATTTGGCGGATGGTCTTGCGGCCAGCAA
GATGCTTTCAGGTGCTAATCAACTACCTGAATCTGGAGCAGCTGGCAATGTGGTGATCCGGAGAGCTGCCACGATTGCAG
TGGAGGATACAGATTTCGATCGCGTGGAGAGGGCTTCCATACTCACGGATATGCGGCAAGGAAGGGTCAAGGCGCCAAAG
AGACGTCCACCATCGGCGGCTATCAATGTGCTGGGCGAAAGTAATAACAATTCCGTATATGTAAATGGCAGTGGAATGTC
CGGATCTGGTGGAGCAGGAAGTGCCAGTGAGTTGAGTGAAGATGGCGGTGCTGGAGGGAAGACTTCTGATGACAATTCCA
CCGGCGAGGAACCACAGTTGGCCAAACCCAAGCCACGTGAGTGGGAGAAGAAGAAGGCGCCTTGGATGGAGGAGCTGAAG
GCCTCGCAGGTCACCAGGAAAAAGACCTCACCCAGTGTGGAGCCACGAGGAGCTTCGGTGGCCGAAAGGACATCCAAACT
CTTTGCGGCCGAGCAAGCTGTCAGCAGCAATAGCAGCAGTATCACAACGAAAGTCCAATCTTCAGCGGTGACCTCCTCCA
TGTTTGTGGAGAACTCAACGACCAGCAGCTCGGTGATCACCAGTAGCTCCCACACCACCACCAACGATGCCATCATGTCG
CGCAGCTTGTCGGCTGCCAAAGTCCAAACCGCCAGCAGCGACGAGGAGACGAGAGCCACAAGGCCAAACAGTCTAGCTAT
ACGAAATCAACGAAGTGTTTCGCCTCTGGTAAAGAGCTCCAATGCCAGCAGCTCGCAGTCCCAGGAGGAGAAGCCCACCA
GCCAGCTGAACAACCACCAGGATGCCAGTTCCTCAAGGGTGGCCCAATTGGAGCAACGGGTGGATAAGCTGGAGGGGCTG
GTGCTAAACCAACAGCGAACCATTGAGGAGCTGGTAAATGCCCTGAAATCGGAAGCTGAACGCGTCAAGATTTTGAGGAG
CGAACTGGACAAATACGCGCAGTGCGTGACGCAAGTTTGAGCCTAGTTGAATCGCCTTTTAGCTAGCTTTTGAATACTTG
ATTTTTAGCGTCTGCTGAACTCTACAATATACCCAGGCCTAAAAGCGTAGAACGTAGTAGAGTAGAGACCGAACCCAAGA
CAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGATCTATCCAAAACCACTAGCGATCAATCGTTT
TTGCATGCCAAAACCGTTTCGTTTTTCGCTACAATACTTTGTATTCCCCTGTATATCTGATAATTTCGATAAGTATTTTT
TATACACTCGTACATTCCGAAGAGCAAAAGGGTGTGATTTCTTTTAGCTGCTTTCGATTGCGATTTGTTTTGTTTATTCG
ATTTATGATTATTTTTTAAAGATGTATTAAAGTTATGAGTAAACTGTACTATAAACTATATACCTAACGAGAGAGAAACA
TACAAAGTTCGATGGAGTCGATGATGATGCCTAAAACTTAAGCAATACCAATAAATAATGCAAATAAATACTTCAATGTT
TTCTGAATGTTTTTCATTTTCTTATTTCGATGTGATTCTGCTTTTATTTTTTTCTAAATGACTGATATAGATAGTTAGCG
ATGTAGAGAATCCACATATCTAAGCCCGGATAATAAACTAACCTTTTTGATAAAATTTCTTTTTCATAACAGCAAGCAAA
CTCGTCGCGGGAAATTCGACAATTGGATGTTTTAATTGATCAGCGGATCAGATCAGCCGTTAGATCGAACGATCCAGATA
TATTAGATATTTATAACCCAGACCCGCCTGTACAGAATATTCCTTTTTCTTTTGTGATAAGCCTCCGCATAACCAGCTTT
GTAGTCTAATCAAATCAATCTGCGTAGCTAGCCACCCGCAATTCCCGATTGTTAGCAAATATGTTGTGGTTTACTTGGAA
ATATCGCATTTTGTATGGCTTAACATGTAAATATTATTGT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        cindr-RA
        FBtr0085707
        2071
        cindr-RB
        FBtr0085706
        2307
        cindr-RC
        FBtr0085704
        3817
        cindr-RD
        FBtr0085705
        2799
        cindr-RE
        FBtr0310068
        3897
        cindr-RF
        FBtr0310069
        2970
        cindr-RG
        FBtr0310070
        2976
        cindr-RH
        FBtr0310071
        2281
        cindr-RI
        FBtr0310072
        2225
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        cindr-PJ
        FBpp0302572
        941
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        cindr-PA
        FBpp0085069
        545
        cindr-PB
        FBpp0085068
        537
        cindr-PC
        FBpp0085066
        882
        cindr-PD
        FBpp0085067
        635
        cindr-PE
        FBpp0301769
        848
        cindr-PF
        FBpp0301770
        692
        cindr-PG
        FBpp0301771
        694
        cindr-PH
        FBpp0301772
        537
        cindr-PI
        FBpp0301773
        537
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        cindr-RJ
        Secondary FlyBase IDs
          References (0)