FB2026_03 , released September 17, 2026
Transcript: Dmel\aPKC-RJ
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General Information
Symbol
Dmel\aPKC-RJ
Species
D. melanogaster
Annotation Symbol
CG42783-RJ
FlyBase ID
FBtr0329887
Feature type
Associated gene
Evidence Rank
Length (nt)
4573
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 40 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Sequence
        ACTCGCGCGTTGGCCGCTCGCCTGTGTGGAAGTGCCGTGCGGATTTCGATTCGAAGATATAACTCCCCGGGCCTTACAAA
        CAAATACATAATTATAGATATATATATACATATACATATATATGTATACAAATATACAAGATTTTGCACAGCTAAACGGC
        AAATCGAGTTTCTGCGCTGTGAATTAACAAAAGAAAGCGGAAAAATCGAAGTTAATCAAGTCCAACGCAAACGAACTTAC
        AAAATAAGCAAAATCAAATTCGAGCAAAATCAAAACGAAACGAAGCGAGAGCTTAGTGAACTTAAACGCAATAAACGCGA
        CGCGAAGTGAAAAATTTGTTCAAGTAAACCAAAATGGCCTGGGGCTATTGGTCCGCCACGACTGTGGATCGTGGACGATC
        GCCGCGCCGCCTGACGCAATGTGCACCACTTCCGGTCAACATCGTGCAGCAGGAGGAGGAGGAGGAGCAGCCCTGCCTGC
        CGCAACAGCAGCAGCATCAGCAAACGCAGCAGCAACAGCAATCGCAGACCTGCCCCAGCACACCGTCGGCCAATCAGCAG
        GGCAGTGGCAACTTGTGCTACAGCCCCACCTGTCGATCGCGCTGCTCGAGTCCTTGTCCGGGATCTCCGTGCGGCTCCAT
        TACGCCGCCACCTCCGCCGATGCTCACGTCCTCGCAGCAGCACCTGCATTCCAATAAGAATTGCCCAGCGGCGCAGCAAC
        TGATGACCCACTTGGATTACGCCGCTCGGAGACAATCGCTCGACCAGCTGGATAGTCCACAGTCCAAGTACTTTGACATT
        CAGGCCAACCAGCTGTCGGACATCATGTGCCGCGGAGCGGTGGTCAGTTCCATTCAGTCGGCGAACAACACGCTGACCCG
        TGGCGTATCGATGCACAGTAGGAGTGGCAGTGCCCACGGGAGTCACCATGGCAGCCACCACAGTCACAGTCATCATGGCA
        GTGCCCACGGATCGCTGGGCTGTTTGCAGGGCGGCGTGGGAGTGGGCGTGGGCACAGGAAGTACGGGCAGCATTGGCATG
        ATGTCGGCCGGACATATCGACACTGGTGACTACGATGTGCCGCATCCGCACCCGTATACGCATCATTATATGCAGACGAC
        GGCATCGGTGACACCGCCACACACGTCACTCAGTCGACCGGGATCGGCGGGTGCCGTGTGCCAGGGTCACGACTCTGGAT
        CGGATTCTAGTCAAGGTTGCGGCGGATCCATAATGGGCGGCATGTTGGTCATGGGTCATCCGGGCCATATGGGCAGCTTG
        GGTCACCACAGCGCCGGTAGCGGATCGCTGGGCAGGTGCTCGAGCAGATGTCACAATACGAACACCACCACGACGGATGA
        CTCGGGCGGTGGCAGTAGCGGCGGCGGCGGAGTACCGGGCACCATGAGTAGTGCCTCCATGGCGGTGGGCATGCCGGGCA
        TGCTGATGGACTACCATCATAGTCACCACAGCGGCAGTGCCGGGAGTGGTCTAAACGGATGCGGTGGCGGTAGCATCGCC
        GGCGGAAGCATCGGAGGAAGGAGCAGTGTCCTGGGCACGATCCACAATGGACATGGCCATCATCATCAGCAGTATCATCA
        CGAGTGCATCCACTACGAGCGATTGCCCATTCCCGTGCCCATACCCACAGTGCCGATGGGCGTGGCACCGTCCTCGCAGC
        AGATGTCACAGCACCAGCTTCAATCGGAGGAGGAGATCGAGCCAGCCTATGCGACAGTATTTCCCAATGTTCCTCAAGCG
        CCGGGATTGTCTTGCGATGGCGAAGATCGCAGCATCTATCGACGCGGTGCTCGACGCTGGCGCAAGTTGTATCGCGTCAA
        CGGACACATCTTCCAGGCCAAGCGTTTCAACCGGCGTGCTTTCTGTGCCTACTGCCAGGATCGAATCTGGGGTTTGGGAC
        GTCAGGGTTTCAAGTGCATCCAGTGCAAGCTGTTGGTGCACAAGAAGTGCCATAAGCTTGTGCAGAAGCACTGCACCGAC
        CAGCCGGAGCCGCTGGTCAAGGAGCGGGCGGAGGAGTCCAGTGACCCTATACCGGTGCCTTTGCCGCCACTTCCCTACGA
        AGCGATGAGCGGCGGAGCCGAAGCCTGCGAGACGCACGACCATGCGCACATAGTGGCGCCACCGCCACCGGAGGATCCAT
        TGGAGCCGGGCACTCAGCGCCAGTATTCGCTGAACGACTTCGAGCTGATACGGGTCATCGGACGCGGCAGCTATGCCAAG
        GTGCTAATGGTGGAGCTACGACGCACACGGCGCATCTACGCCATGAAGGTGATCAAGAAGGCGCTGGTCACCGACGACGA
        GGACATCGACTGGGTGCAAACGGAGAAGCATGTGTTCGAGACGGCCTCGAACCACCCGTTCCTGGTCGGATTGCACTCGT
        GCTTCCAGACGCCCTCGCGGCTCTTCTTTGTCATCGAGTTTGTGCGCGGTGGCGATTTGATGTACCACATGCAGCGGCAA
        CGGCGGCTGCCCGAGGAGCACGCCCGTTTCTATGCAGCCGAGATCAGTTTGGCGCTGAATTTCCTTCACGAGAAGGGCAT
        CATTTATCGCGATCTGAAGCTGGACAACGTGCTGCTGGATCACGAGGGCCACATCAAGCTAACGGATTACGGCATGTGTA
        AGGAGGGCATTCGACCTGGAGACACCACCTCCACATTCTGCGGTACACCCAATTACATTGCCCCTGAGATACTGAGGGGC
        GAGGACTATGGCTTCTCGGTGGACTGGTGGGCACTAGGCGTCTTGCTCTATGAGATGTTGGCCGGCCGTAGTCCGTTTGA
        TCTGGCAGGAGCCTCAGAGAATCCCGATCAGAACACTGAGGACTATCTGTTCCAAGTGATCCTGGAGAAGACGATTCGTA
        TACCACGCTCGCTGAGCGTTCGTGCGGCCTCTGTCTTAAAAGGTTTCCTCAACAAGAATCCCGCTGACCGTTTGGGCTGC
        CATCGGGAGTCCGCGTTCATGGATATCGTCAGCCATCCCTTCTTTAAGAATATGGATTGGGAATTGCTTGAGCGCAAACA
        GGTCACGCCACCATTCAAGCCACGCTTAGACTCAGATCGCGACCTGGCCAATTTCCCGCCCGAGTTCACCGGCGAGGCCG
        TACAGTTGACCCCGGATGATGATCATGTCATTGACAATATCGATCAATCCGAGTTCGAGGGCTTTGAGTATGTAAACCCC
        TTGCTGATGTCTCTGGAGGATTGCGTCTGACACCACGAAATGTGCGACTTACATCCGTATAACATGCGGCTCTATGGCGA
        GGATTCCAGTGATTACGATTCCGTGGCTGACGATTTGAGTCTCCTGCATTTGAACAGCGCAGCGGGAGCTGGTGGATCAG
        TTAGCAGCAATAACAATCTCAGCCAGCAGCAACATTATCGCCAGCAGCAGCAGCAGCAATATCAACCCCATTCAGCATAC
        TCACAACAGCAGCAGCAGCAGCAGCAACATCAGCAGCTGCAGCAACTTCAGCAGCATCAACATCAGCAGCAACAGCAGCA
        ACAACTTCATCATAATGGTAACAATAACATTCATAATAATCAAATGCAAGCAAATAATAATAAAAGTCTACTGCAGCACA
        TGTTTTGCCTTCCATTGAACTAATTAAAATAACGAATTAGAAAAAACAACAGACAACAACAATGAGCCACACAGCAACAA
        CAAAAAGCAGAGCAACTAAGAAAATTAAAAAGATTCCAAGAATATAAATTTCATAATATACAATCTATATAATCCTTTCT
        CAACAACAGACACAACTTTCAAAAGCAAAGTATATTTATTATATAAAAAGGCGAAGGCAAAAGCAATAGCCGAAGCAAAA
        CAAAACAAAAAACTGTCACAAGTTGCAAGTATTACACTAAACGATTACTTTACTATTTAAGCACCTAGGCAGCCAGGCGA
        ACTTTATGCAAGCAAAAGATAAACCATTTCAAAACTCAATGCAAGACTTTTCACCAAGAAACTTAGGGGTTTGACGATCC
        CGCGAGAATGCAACAAGAACTTTTTAAGCTAACAATACGTGCATCAGATATGAAAATATATAATTTTTAAAGGTTTAACA
        CTACAATGAAAATTTCATGTTCATTTTACTAGGCAGGAACGGTGTGCGGTGGAGGAGACCGAATATGGGAGTATATATTT
        CAAGTGAATCAATCTATAATATCTAAGCATATATAAACTCTAATGTAAAATGTGTGTGTGTTAGTATTAGAGAGCAGAGC
        ATGGTTTTTAAAGGCGACAGCAAAAGATCGACATATACATACGTGTGTACTGTGAACAGCAATAGTTAATGCAAACGAAA
        TACCAATTGTAACTTCGTAACTCTAATTTTTACACAGAGAACCGTTAACCGAAGTCGGGGGGACGAGGAAATTCTCTTAA
        AATGCGAACAAAAACATATTTATTTATTTTATTCATTTTCTACTCTGTATTTTTAACAGCAAGCAAACACAATCCGTCTA
        CTGGCAATATAACTTTGTTAAGTATTAAAAAAAAACTTTTGTTTTTAATGCATTCCACTGTACTTACAACAACAACAAAA
        ACATATATATATT
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0303434
        3240
        FBtr0303429
        2075
        FBtr0303430
        2392
        FBtr0303431
        3320
        FBtr0303432
        2069
        FBtr0303433
        3023
        FBtr0303435
        3560
        FBtr0303437
        2191
        FBtr0329888
        2863
        FBtr0329889
        3023
        FBtr0329890
        2964
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0302921
        958
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0292491
        606
        FBpp0292486
        526
        FBpp0292487
        606
        FBpp0292488
        608
        FBpp0292489
        524
        FBpp0292490
        503
        FBpp0292492
        951
        FBpp0292494
        511
        FBpp0302922
        519
        FBpp0302923
        634
        FBpp0302924
        620
        Comments

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

        3' UTR based on RNA-Seq data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        aPKC-RJ
        Secondary FlyBase IDs
          References (0)