FB2026_02 , released June 18, 2026
Transcript: Dmel\Sema1a-RH
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General Information
Symbol
Dmel\Sema1a-RH
Species
D. melanogaster
Annotation Symbol
CG18405-RH
FlyBase ID
FBtr0329931
Feature type
Associated gene
Evidence Rank
Length (nt)
9751
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 53 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          TGCCATTTGAGACTGAACTCTCTTTCGTGCGAGTTCCCTTTTCATTCGAAAATTTAACGCCCGCGCTGCTGCAGCGCGTT
          GTTGCTCCGGTTGGAAAATATCTGAAAACAGCATTAATAAATAAACAAAAATATTGGATAAATCGCCGGTAGAAACGCTG
          CATAAAACGAAATTTGGTTTCTTGTAAAATATTATTTTTCAAGATATTTTCTTGTTAATTTCCGGATATTCGACAAGGAT
          ATAAATGTTTCTTTCGCGTTGATAAACAAATTCCAGCACCGCTACCTTTGTGTCGCGCAATTGTGAAAAGTGATTTGTCC
          ATTGTGTACATTAATTAATAAATTGTATTTAAGCCAGAAACAAAGTGAATAAGGCAAATTTGAATAAAGAAAAAGAATAA
          ACCAAGAAAATATGCTCAGAAATCGCATCCGTAGCCTACTTATCGCATGAAGAACCGGTACCGTTAAGGGATAATCGCCG
          TCGCGTTAATTCGACTCCTGCACCGCACCGCCCCGCCCCCCCGTTCGTCGTTTCGTCTATTCATATATCCGATATAACCG
          TTATCGCGCCCGTGCATCTGCGTCTGCATCTGTGTGCGTGAGTCCTTGTATCCTCTGTACATATGTACAATATTTGTCGT
          CGTCGTCGTCGTGCATCGTTGTTGTTGTTCTTGCTGTTATCCTATTATTCATCGTCGTCCGCTGGCATTAATCTGCGTAT
          AAAGTAAATATAACAAATTTGTGTTCTTCGGTGTTGTCTCGTGTAAGTGTCTATAATTTGTTTAAGTACGACAAGCGATC
          GGTGCGAATCAAAAAATTCCAATTCACCAGTCTGTGTGTGCGAATCGATAATCGAGCTATCAGAACAACCACAACAACAA
          CAACAGCCCAATCAATCGATCAATGTCAGCAAACAAACGATAAACAGGACTCGCTGGGACTAATCAATTGCGTAATCTTC
          AGAATATTTTGGATTCCAACGTCTACGGAGTTTCAACTTTTGAACAATTCATTTTGCTGGACAGTTTTTGGAAAGAAATG
          ACTGAACTTTCATCCCGCAAACCATTCGTTCGCCCATAAAACCCAGAAACAATTTAAGCCCTGTTATAAAAAAAGTTGTT
          GAACAAAAAATTAATCAATATATTTTGAAATAATTTAAAATCAATTTAAAGTAAAAGGTAAATGCAGCTGCAATAACTCT
          AAAACACGCACAACCAAGCCAAACAAACATCAAATCAAATCCATTTAGCTGCAATAAAGTTAGAGGCAAAGGCACACACA
          GAAAATCAACAATAATAAATGTTGCAAATTTAATCAAACCAACTGAAATTTAACTAAATTTTATGCAAAATAGAAATGTT
          AAATTCACACAACACAAACCACAATAACAACAGCGCCAGCAACAGCAACTACAACAAAGGCCACAAAATGCATTTGAAAA
          GTGCAACGGCAAAAGCAACAATAATGAAACATAAGTTAAGCAAATTTTACGGATACGGTTGGATGCAAGTCTTCCTACTA
          CTTACAGTCCTCGTGATTGGTAATCAAAGTGCCTGGCAGGAGAATATACGACCAAAACTCTACGTTGAATTAGGTCCCGA
          AGATGTACTGAAGTTTGTGGGAAACGAAAGTGTTGTGGATCACTTCAAGCTCGTCACCAAGGATGGCAACAGTCTGCTCA
          TCGGTGCCAGAAACACGGTTTTTAATTTAAGCATACACGATCTCGTCGAGCAGCAGCGATTGGTCTGGACATCGCCGGAG
          GATGATACCAAAATGTGTCTCGTCAAGGGCAAGGATGAGGAGGCCTGCCAGAACTACATCCGCATCATGGTGGTGCCATC
          GCCGGGTCGCCTTTTCGTTTGTGGCACCAACTCGTTCCGGCCCATGTGCAACACGTATATCATTAGTGACAGCAACTACA
          CGCTGGAGGCCACGAAGAACGGACAGGCGGTGTGCCCCTACGATCCGCGTCACAACTCCACCTCTGTGCTGGCCGACAAC
          GAACTGTATTCCGGTACCGTGGCGGATTTCAGTGGCAGCGATCCGATTATCTACCGGGAGCCCCTGCAGACCGAGCAGTA
          CGATAGCCTAAGTCTCAACGCCCCGAACTTTGTGAGCTCATTTACGCAGGGCGACTTTGTCTATTTCTTCTTTCGGGAAA
          CCGCCGTTGAGTTTATCAACTGTGGCAAGGCGATTTATTCGCGCGTTGCCCGCGTCTGCAAATGGGACAAAGGTGGCCCG
          CATCGATTCCGCAACCGCTGGACATCCTTCCTCAAGTCCCGCCTCAACTGCTCCATTCCCGGCGATTATCCTTTCTACTT
          TAATGAAATCCAATCTGCCAGCAATCTGGTGGAGGGACAGTATGGCTCGATGAGCTCGAAACTGATCTACGGAGTCTTCA
          ACACGCCGAGCAACTCAATTCCCGGCTCAGCGGTTTGTGCCTTTGCCCTCCAGGACATTGCCGATACGTTTGAGGGTCAG
          TTCAAGGAGCAGACTGGCATCAACTCCAACTGGCTGCCAGTGAACAACGCCAAGGTACCCGATCCTCGACCCGGTTCCTG
          TCACAACGATTCGAGAGCGCTTCCGGATCCCACACTGAACTTCATCAAAACACATTCGCTAATGGACGAGAATGTGCCGG
          CATTTTTCAGTCAACCGATTTTGGTCCGGACGAGCACAATATACCGCTTCACTCAAATCGCCGTAGATGCGCAGATTAAA
          ACTCCTGGCGGCAAGACCTATGATGTTATCTTTGTGGGCACAGATCATGGAAAGATTATTAAGTCAGTGAATGCCGAATC
          TGCCGATTCAGCGGATAAAGTCACCTCTGTAGTCATCGAGGAGATCGATGTCCTGACCAAGAGTGAACCCATACGCAATC
          TGGAGATAGTCAGAACCATGCAGTACGATCAACCCAAAGATGGCAGCTACGACGATGGTAAATTAATCATTGTGACGGAC
          AGTCAGGTGGTAGCCATACAATTGCATCGTTGTCACAATGACAAAATCACCAGCTGCAGCGAGTGCGTCGCATTGCAGGA
          TCCGTACTGCGCCTGGGACAAAATCGCTGGCAAGTGCCGTTCCCACGGCGCTCCCCGATGGCTAGAGGAGAACTATTTCT
          ACCAGAATGTGGCCACTGGCCAGCATGCGGCCTGCCCCTCAGGCAAAATCAATTCAAAGGATGCCAACGCTGGGGAGCAG
          AAGGGCTTCCGCAACGACATGGACTTATTGGATTCGCGACGCCAGAGCAAGGATCAGGAAATAATCGACAATATTGATAA
          GAACTTTGAAGATATAATCAACGCCCAGTACACTGTGGAGACCCTCGTGATGGCCGTTCTGGCCGGTTCGATCTTTTCGC
          TGCTGGTCGGCTTCTTTACAGGCTACTTCTGCGGTCGCCGTTGTCACAAGGACGAGGATGATAATCTGCCGTATCCGGAT
          ACGGAGTACGAGTACTTCGAGCAGCGGCAGAATGTCAATAGCTTCCCCTCGTCCTGTCGCATCCAGCAGGAGCCCAAGCT
          GCTGCCCCAAGTGGAGGAGGTGACGTATGCGGAGCCAGTGCTCCTGCCACAGCCTCCGCCGCCCAATAAGATGCACTCGC
          CGAAGAACACGCTGCGCAAGCCCCCGATGCACCAGATGCACCAGGGTCCCAACTCGGAGACCCTCTTCCAGTTCCAGCCC
          GACGGCTACAACACCCAACAGTCGTATCGTGGTCGCGACAACTTCGGAACACTGCGTTCCCACCAGGTGATGGGCGACAA
          TTACAGGCGCGGCGATGGCTTTTCCACCACCCGCAGCGTCAAGAAGGTTTACCTTTGAGACGGGAGTGGGGCGGCTGAAA
          CCAGTCAGGGACTAATTACCCAAAATATGTAACTCAACACCGCTCGAATAGCCCCCAGCAGCAGCAGCAGCAGTCGCAGC
          AGCCGCACTCCAGTTCTGGCTCCTCGCCCGTAATGTCCAACAGCAGCAGCAGTCCGGCTCCGCCCTCCAGCAGTCCCAGT
          CCGCAGGAGAGCCCCAAGAACTGCAGCTACATCTACCGTGATTGATTGATATGCAACACCAAATCGATGCCACTCATCCA
          GGCCCAGTCTACGCACGCCCAGCCACACCCACAGTCGCACCCGCACCCGCTTCCGCCACCCGGTCCGACCACGCCCCCAG
          CACAGCCACGCGCCAGAAGTCCAATGATCGGCAGGACATATGCCAAGTCCATGCCCGTGACACCAGTTCAACCGCAATCG
          CCGCTGGCTGAGACGCCCTCCTATGAGCTCTACGAACGCCACTCGGATGCGGCCACCTTCCACTTTGGGGATGAGGACGA
          TGACGATGATGATGAGCACGACCACGAAGACACCTCATCCCTGGCCATGATCACACCGCCGCCGCCCTACGACACTCCGC
          ATCTGATTGCATCGCCGCCGCTACCGCCGCCTCGTAGATTTCGCTTTGGCAACAGGGAGCTGTTCAGCATGAGTCCAGCC
          GGAGGTGGAGCCACACCCACCGCCTCGGCAGGCCAACGCGGCAGCAGCGCCATCACGCCCACAAAGTTAAGTGCGGCGGC
          AGCAGCCATGTTTGCCGCACCCCAAATGGCCACCCAACTCAACCGGAAGTGGGCTCATTTGCAAAGGAAGCGGCGCAGGC
          GCAACAGCAGCTCCGGCGATTCCAAGGAGCTCGACAAACTGGTCCTGCAATCGGTCGACTGGGATGAGAACGAGATGTAC
          TAGAACGCAGACCAACAATGAGATAGCAGAAACACTTTGATTCGGAATTTTAACACCTTTGCATATTTTGAATATGACTT
          CAATTTTAAAATGCGTAATTATGTTCTTATTTTTTAAAGAACGCTTTAGAGAAGTTTTCTGCTACCTCAAATAGTACACA
          CAACTCATTTCTAACGTGGCGCTGAGATATAGGAATAATCACTCCCCCTTCCCTAAAACTTAAAGTAGCAATCGAAAAGA
          TCATTCATTAGCGATAGAAACTGGATGGGGATTTACTTACACACAAAAAGCCAGAGAAGTTATACACGAAGTTTATAGTT
          ATATAGCCTTTATACATACTCCCCGATCTGCTAAGTATACACAAGCAAGCATAACATAACATACGTATATATGACTCTAT
          ATATACCAATAGATTTCATAGACGATTCACATGGATCGGCTACGCTAAATTAGAGCTGATATTGTTAATTACGATTAGAG
          AAGAAAAAAACAACAGTTGTAAATATTAATCCTAGAGATGGGAAAGACGTAACGTAATCTAAGCAAACCTTATTCGAATA
          GAGTATACACGATATACAAGATTTTTTGCATTTAAACCAGAGAAGTTTAAAATAGATAAAATTAGAAAGTCATAACAAAT
          GGTTAAGAACAATGAGAAAACAAAACAAAACGAAACGCTTATTACTGATTTATACAAATGAAATGAATTACCGAAATAGT
          AGGAGGGCAAACAAATTAGTCATAAGCCGTCAGATATCTGGGAAATATAAGGGGATTGCATTCGGGATTCATTCCGAACT
          GGAACTGGAACTGCCAAACGCGATGCAGCGCTCCCAACGAAATCGAATCCATCGAGTGCATTTTCCATTGTCAATTTCAT
          TTGCAGAGCCTCAAGCTATAGTACTTCTTTAGACTTCAGACTCCAGCGCTTCAGTCTGCTATAGGAACATGTAAATTATG
          TACAGGACTATACGCATTATTCAACCGATCTGTACAGTGCGATCTGCAGTATGTGCGATATGTGCCATAATTGGGTATGT
          GCCCACTTTGAGTTTAGTTGTTATTGTTTGCATTGATTCAGAATAGTTCTTTACACGAGAACACAACTCGCTATCTTTGT
          ATATATTCGAATATATATATAGATATATACATACATACTTATATGCATGAAGAGGGATACACAAATTTCATGTGAAGTGA
          TCGATCAAAATTTAGTGAAAGCATTAAAACTGAACTTTAGCCTAGCCACATAGGGTTTGTATTATAGACTGGACGAACGG
          AGGGCAGAACAAAACTTTTGAAAATATTTTCACTAGGGGCATTGCTAATGTTGTTCTCATATTAAAGTATATTAGAAATA
          GGATAAGCTAATTGATACTCAATATTTTGTATGAGAAACATTAAAATCATCCGATCAAACTTGGAAACTTGCGTTGCAAA
          ACGAGTAAAAAAGCGTAGAAATATCTAAATCAAAGCAAATGTATAAACAACAAAATCCATAAAAAGCAGTAGATTTATAA
          AGTAAACCCACACAGAAACGTAAGCGTATATATTGATTAATATATACTTTTTGCAGCTGCAATTTAATGCTTTTTATATG
          CAATTTTACTTTTTGACAAAATGTATACAACCGAAAAACGATCATCAACAGCGGAAAACAAAAACGCATAGAAACCAAGT
          AAAATTGTTACGATTACATTTAGACAGCCAAAGATACGAGTGATTTTAAAATTTGTTTTTAAAGTTATTTGTGTATATTT
          TTAATTCGTTTTATTTGTACAAAAATATTATTTAAAGCAATTTAAACCTCTAAACAAACTATGTAACACTAAGGTTACTG
          TTTCTGATTATTTAGTTATTCAATTATACACCTTATTATTGTGTTCTTTTTCTTTAAAGAAATAGTGTCGAGTACTTTGA
          AAGCAATAAAAACACTTGAAAAAATATATGAAAAATATAAATGAGATTCAGACACATAGAGTAGCAGCTGATGGTAAAAC
          TTAGGAATACACTAGAGTTTTGAACTAATTCTAGATCTACATCAACTACTTATACAATTGCATACAAGTATTAATTGAAT
          CAGATCATTAACTTTTATACACTTTACCATTTACATATATACAAGCAAACTGATTGCCGATTACCGATTATTCAATATAC
          AAGGCAAATTTAACATGTAATTGTAATTTGAAGCCAGGCTGCAATTGAAAGGTTTTACAGTAAATCATGCCTACACACAT
          AAACCAGCAACAACAGTAACAAGATCAGAGAATCCGTAAATATATACTTATACATAATATAGATGACCCATATACATACA
          CTTATTAGATACTTTAGAAGAGAGATTCTCTAGAAATGCTTTTAAATTAAAAAATCCACGAAAAACCAAAAAAAAAAAAA
          AGAAGTAATAAACAAGAAAAATAACTGATTTAAGCAAAGTATTTTATTAAAAACACTCAGTAAGGAAATGGCAAATTCAA
          GCGCAAAAACACAAAAAAAATACATATATATATATAAATTTCTTAAAACTTTCAGCGAAAGGCAAACATTTGTGAAGTAA
          GCCAACTCAGACACTTTTTTAGAACATCAGAAATTGGGGTTGACGATGATGGTGATCACTAGACGTCGTTGAAGATACTT
          TAAAGATAATTATAAGCTAAACGAAAACGATTTTTAACTTTCTCCGAATAAGACAAAAACAATTATTACCTTCTGATGGT
          AGAAGCGCATTCATATTTGCTAATTAGCAACTTATTAAACTATAAACAACAAGCAACATTTAAAAGCTAGAGCAGAAAGC
          AGGAACCGACACAAAAAAAAGTAAAATAAAATAAAAATGAAAACATGAATCCACGAATCCATGACACCACACACCCAAGT
          TTTCATTTTCCATTAAAAACGATATATATTCAAGTGCTTCTTACATAAAATAAATATAAATATATATGAAACAAAAAAAT
          ATATTAATGATTACATGATAGATATTATTACGAGCAGGCATTACATTATAAATACCTACTAACTAGTTTAAGGCATTTAC
          CACAAACTTGATTATTATGAACTGTATTATTATGTTTTGTGAAATCGAGCGAACTATTACAGATCAAGAAAATCAGATTA
          CTGAGCGGATTTAGAGTAAGCGTAAAAACTCTGTACTATATCCGGTTCCGTTTGGTTTTTTAATCTCTAAGTAGCCAGCT
          CTCTATGCAAATAGAATAAAGACGAACACACACTGACACGTAATCGATGCATTTTACTTACTTGATGGCCATCAATGCAG
          CAAAGTAAAGCGAGTTCATGAATTCAATTTATATAATTATGTTAAGATTTTATAACGCAACAAGCCTAACGTATGCATTA
          CCCATATGAATACTATTATGCGAATCTTTGTAAATACTTTACCAACCAAATAAATAATCCTTCATTCAACCAAAACAAGA
          TCAGATCCCTAACTCAATCAAAGTAAGCCCACGCATTTGATTTCCTTTCCACACCCACACCCAAAACCAAAACCATACAC
          AATCCTAAAGAAATGCTTATCGGTTAGGTATTATCAAAGCATACGAGCCACGAGTATGTTATCCATTCTTTAGCGATTAC
          AAATACGTAAGGATAAATTTAAATTGTTGAATATGTAGCGCAAGAACGTAATGAGTAACAAACTAATGAAAGCCCCAAAG
          CGAATAACAAATATTTAACCAAATAAGTTACGAAAGTTAGACACAAAACGGTACTTCCAAGCAACTATAGAGCTAACAGC
          AAGCCATTTAAATGAATGAACTCAGATGCGAACTAAACTGTATGAATTGAATTCCCGACCCGATCCCAATTTAAATCCGC
          TAATAGATAGGGTGCACCCAAATAAGCCCCAGATCTTCTTAAGCAGATACGAAGATCGATAACGGTTCATGCGAAATGGT
          TGCCCTATCTTCTAATTCCTCCATAGAAATCTCCTCTACACAACATCCCATTAGGAATTCGTCAAGTTTTGGATTCAGAA
          ACTAATACACAACACTTAATTATTCATGAATGCGGCATGTGCAGTATCATAAATCAGAACGGCACCGCAAATCGAGAATC
          TACAGCATGAAGAAGCTATATAGAACAACAACAACAACAACATGAACAACAAAAAATTGTTAGTAAAAAGACTGAGCTAC
          AAAATATACAAGAAAAAAAAAACACAAAAGAAACAAAAGCTAGCAACAAATCAGTGAATACCTTTGATTCAGTGACAAAT
          TAATTAACGTGCATTTTTGGGTAAACGATCTTTGACAAACAAAAAACGAGCAATTCGTTACAATTTTCAGTTTCATCAGT
          CGTAAATTTGTTAAGAAGTTCCTAACACAAAACGCAGGCAAATCCATTACCAATCAATCTCAAGCCAGGTTCAAATTGTG
          CACCTACCTAGAAGGAACTTCTGCATTTATAATACTTCTCAGTGCACGATGGTTAGTTGAAATCGTAGGGAAGCTGCTAA
          ACAAAATACGTAATTTGACACATTACTTTTAAGTTCGAATTTGGATTTGAATTAAGAGGCTTCTTGTTTTATTTGGGCCA
          CTGCCACAGCATAATCGAGATTAAAATACCTAGAAAGAATATATATAAACACGTATATACATATATAGACTCAAGTATAT
          ATGCATACACTTGCTTTTAGCTTTCCTAGAACTCTGATTTCCATACTTGAACGTACAGTAAGCTGCGAGACATAAGAGAT
          AGTCGGTCTCAGACACGAAATAATCAAACTGAAGCTGATAAAAACGACACGAGCTCAAAGATTTGGTCCGAGACACAATT
          AATTCCACACAAACCAAACGGATCGGAATACATTCTGAAAAGCAAGCCACACAAAAGTTGAACATGCATTGCGAATAAGA
          GAAATCGATTAATGAAAACCGCATATTATTAATGATTATTATATTGTATTATTATAACTGAAATATTTAGATGAAATGAC
          GATTCTTAATTATAACACATTATTATAGATACATACTGAACAAGCCGAAGCAAAAGAAGAAATTGAAAATG
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0079691
          5661
          FBtr0303877
          9706
          FBtr0303878
          9624
          FBtr0303879
          7980
          FBtr0329930
          5679
          FBtr0329932
          7826
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0302963
          820
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0079302
          899
          FBpp0292880
          905
          FBpp0292881
          905
          FBpp0292882
          826
          FBpp0302962
          1131
          FBpp0302964
          817
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          Sema-1a-RH
          Sema1a-RH
          Secondary FlyBase IDs
            References (0)