FB2026_03 , released September 17, 2026
Transcript: Dmel\vsg-RE
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General Information
Symbol
Dmel\vsg-RE
Species
D. melanogaster
Annotation Symbol
CG16707-RE
FlyBase ID
FBtr0330097
Feature type
mRNA
Associated gene
Dmel\vsg
Evidence Rank
Length (nt)
2164
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 132 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      ATCGAGTTGGCATAAAAGAATCTGGTCTTCGTGTCGTGTTATTCATTCCTTAATTGCGCCTTGCTTTAATTTGTGGATTT
GCTGACTTTGTCGTTCGAGTACTCAGCGTTTAACGACCACAATGAATCGGCAGGCGAAATTCCTAATCTTGTGCCTCTTT
GTGGGCCTCTTCTCCGCGAATTTGTGCGAAGAAGTGACCACACCGGCTCCAGCGGACACCACCACCCAGGAATCCAAGAA
CACCACCACTCCGCCGGACACCACCACTACTGTGACGCCACCGTCGACCTCAACCACGAGCACCACAACTGAAAAGACCA
CGACGACGCCACCAATTACCACATCGACTGAGAAGACCACAACTTCCACTACTCCAGCCAGCACCACCAGCAGCACCACT
CCGGCCAGCACCACCAGCAGCACCACTCCGGCAACGACCACCACCACGCCTGGAACTACATCTACGACCACTCCGTCTCC
GAACTCGACCACAACTACGCCGCCGCCACACACATCAACCACTCCGGCGCCGAAGCCCGTGCCGTGCGGTCATTTCGATG
GATCCTCGTTCATTGGCGGCATTGTGCTGACTCTGGGCCTGCTCGCTATCGGCTTAGTGGCCTACAAGTTCTACAAGGCC
CGCAACGAGCGCAACTACCACACCCTTTGAGCCGCCACCGCCTTTACGTCGGCCTTCAATGCGGCAGCCGGAGCTGCGGC
GGCCAGCAGCAGTGCCGCATCCACGGATGCGGAGCGCGTGCGGTTTGTCCAGCCTTCGATACCGCTAAGGTCGCCGCCAA
CGCAGCCGCCACCACCACCACCCACCCACATGGGTGGCAGTGGTGGTGGTGCGGCTGCAGCTCCACAAAACTGCTCGCCG
TCGGCCCGAGATCGGTTGCTGCACACGTAATTTAAAAGCGGGGAGCCACACCATATTACCCAATATAATTAATATCCAAA
GAGATGCCCCTATACCCCGATTCCCCAACAAAACACACACACACACACAGAGATACAAACGGCAGTCAAGTAAAGTCAGT
TCTTAAATTGAAACGATAACCCCCTGAGCGGATTTAATACGGGCCCAGATAGTAGGAGCAGGCTCTACATTCTTGAATTA
CTTCCCTTATCTCAGTCATACAGAAAATGTAAAAACAAAGTAAATATTTTTCCTTTAATGCATTGCATTCAATATGTAAG
GGTACGGTTTTTTGCAAACATCAGTTTATCAGCAACTTGAGCGGATGTTCAACGCCTTATATAAGAGGAGTCCGGGGAGC
CTGTCACAGGGTCTTCCCAGGGCGACCATGAACCGAGAAATGAGTTATGAGATCGAAACGAAACGAGACGAGAGGAGTAA
GAACAAATAACAGCAAATATGTGAGACTGCTTGATAGCGAGAAAGTGAAGAGATCAGAAAGTGGAAAGCGGCTGGCGACG
GCTTTGTTTCTGTAATTCATAGGGAGCTACGAAAAGGAAATATAAATTTTTATTATATTTACACAATTTTTGAATAACTA
AAATCGATTCATTCTAGGAACTAAGAATACATATGTACTACCTAAAACCGAGCTAAACACAATGGGAAACGCGTTTCAAT
TTTCTCATTTAATGTGCATTTTTTCTCCGGTCTTTGCCCACTTGTTCTATCGATTCTGCTCACCCCGCCATTCCCGGGGT
CCGTAGTATTGCAAAAAATCAATATAGCTACTAACGATGCACAGCAACAGGATTTACGGATTGCCGTGCACGGTTGATAT
GCGTTTATATGCGATATAAACAAATGTACACATGTTTGTATACTGCTGAAGTAGATTTTGATTCGAGATTCGATGAAAGC
CCCATGTTAATGCATACACGCAAATGTTGAATATTTTGTACTAGAATGGAAACTATACATATGAATTACGTTTACCTAAC
CATACCGCGCTTGCTGTTGGATTAATACACATTTGAAGCTACAAATCGATCACATAAGCCCGTCAAGTTTACGCAAATGA
ACGAAAACTCTGTTGCACATGAAAATCTAATAAGTATATAAGCTAAAGTAACCAATCAATGTATATCCAGTAAATCACTC
AGCCGGCTTACTAATAATATATATATTTATATATATATATCTATGTCTGTATATCGTGTACGATAATAAATATTTTAAAA
ATTT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      vsg-RA
      FBtr0076398
      2270
      vsg-RB
      FBtr0076399
      2164
      vsg-RC
      FBtr0076401
      2167
      vsg-RD
      FBtr0076400
      2273
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      vsg-PE
      FBpp0303130
      262
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      vsg-PA
      FBpp0076127
      182
      vsg-PB
      FBpp0076128
      182
      vsg-PC
      FBpp0076130
      183
      vsg-PD
      FBpp0076129
      183
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      Stop-codon suppression (UGA) postulated; reflected in aa sequence of predicted polypeptide.

      translation_exception: stop_codon_readthrough

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      vsg-RE
      Secondary FlyBase IDs
        References (0)