FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\cpo-RT
Open Close
General Information
Symbol
Dmel\cpo-RT
Species
D. melanogaster
Annotation Symbol
CG43738-RT
FlyBase ID
FBtr0330275
Feature type
mRNA
Associated gene
Dmel\cpo
Evidence Rank
Length (nt)
9743
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 46 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          GAGTAAACGAAAACACTCCGACTCAGTCACACGCAGCGAACACAGAGGCCAGCGATATATATAGTGAAAACCCCGAAAAA
TATAGCCAAATTGAGACCAATATCTGAAATTGTGCGATAAATAAAACGCTGCATACCCCGCAGGGCGCAGCCAACTTATT
CCGAAGCCAAATCGAGAAATTCTTCGAAACGCGAGTGCCACCAAAAATTTATTGTTTCGAATTCGCAGCCAGTGATTGTA
TAATTTCCATTGCTTTGCTATTTTTACGGGTGTGGGCCGTCCAACGGCAGCGGCAAAGAGGATATATCTATCTACATATA
TCTTCCAGGATATACGGATTAACCCAATCTGCGCCAGAGATAATTACCGAAAATCGACAAATTCCCGGGCATAAAAACTT
AATTGACTTGAATAAATAATTTCCAACCCGAGTTGTTGTTGTTTGTTCGCCTACGGTTTTTTTCGGTGAAAGCGAATGCG
GGCCCAAAGCGGAATCGGAAAAAGTTACTGAAATACAACGGCAGGAAAAAAAAACGAATACATAGAGAAACTGCCGCTGC
CGTTGCCGCCTGTGAAAGCAAAGAGAAGGGGGTGGAGAAGGAGCGTGGGCAAAAAGAGAGCGAGAGGAAGAAAGCGCGGA
GGAGGTCGCGGAGTTGGAGAAAGGGGGCTCGAGGAGTAAGAGAAAGCAGCCATTACTGCGAAAGAGAGCCAGAGTCGGAA
GAGAAAGTCCAAGAGACAACATCGCAATTTTGTGGAAGACATTCACAGTGGATGGAAAATTTATAAACAAAAGTTAAGCC
CTTAAGAGAATGCTGACAAAATAAAAAAAAAACGCACGATAAATATATTTTAGAAATGTAACTTAAAAGAAAAGACTCAT
ATCAACACATATCATTCTATAGTCTATAGAAAATATTAAATAACTAAATATACAACAACAAAAAAAGCTGAGACAAGCAG
CTAAATAATTCCAGCAATTACCTAAAAACCAAAACGATATTTTATTGTCTTAAAAGAATAGAAACCAATGCGATAACCAT
ACATATCATGTAAATCGTTTAATGCCAAAAGGTGAAATATGAAAAGTATATTAAATTAGCACATTTAAAAGAAATGTAAT
TCAAGAAATTAAAAAAATCTACGAATGGAAACGTAAACATATCATGTAAAACGCCTAAAAAGCTTGCTGAATCCCTAATC
AAGCTTTTTTATCTTATCAACAAAATAAAAAACAAAACAAATGAACTAGCCTAAGGAGAGTTGTGCAAATTATCGCATAC
ATATCAAAGCTCTTGCAAAGAGCAAATATAAATATTAAATTTACAATTATCTAAGATCTAGTTACCTTAGAAAATCCAAA
AGAACAGTAATTTTTGTTAGAAGTTTTACATTAGTTGTCTCGAATATAACAAGAGAGAGATATATACATACAACAATATT
GTCACATATCATTGAGGAAGCCTCAGCAAAAGTCTAAAACTATAACGACTAGAAAACATATCAATTAAATTAGACTGCGT
GTTTATGAATGCTACGCGAAAATATTAATTACTTTATCAAGCGGACCAATTGCAAATGACGAGAAGACTTCATTGAATTC
CAGACGACGGATTGAAAAATAACTAAAGTTCTTAAAAGACTTTAATTGGGCTGCAATCGGAAGCTCCGAGCAATTTGTAT
ACATTTTGTTAACCAAGTTCAACTGACTCGTCAAAATAGCCAACTACCAGGACCTGTTGGGCAGCCATCATCAACTGCTC
ATAGCCGCCACCGCCGCCGCAGCCGCTGCAGCAGCCGCCGAACCGCAACTGCAACTGCAACACCTGTTGCCAGCAGCGCC
GACGACACCAGCAGTTATTAGCAATCCTATCAATTCGATTGGCCCGATCAATCAGATCAGCAGCAGCAGCCATCCGAGCA
ACAACAACCAGCAGGCGGTGTTCGAAAAAGCCATCACCATTTCGTCGATTGCGATAAAACGCAGGCCGACGCTGCCGCAG
ACGCCAGCAAGTGCCCCACAGGTGTTGTCGCCGTCGCCCAAGCGCCAGTGTGCCGCCGCCGTCTCCGTGCTGCCGGTGAC
CGTTCCCGTGCCCGTTCCGGTGTCCGTACCGCTGCCCGTTTCCGTGCCCGTGCCCGTCTCGGTCAAAGGTCACCCGATCT
CGCACACACACCAGATCGCCCACACACACCAGATCTCGCACTCGCATCCGATCTCGCATCCGCACCACCACCAGCTGAGC
TTCGCCCATCCCACGCAGTTCGCGGCCGCCGTTGCCGCCCACCACCAGCAGCAGCAGCAACAGCAGGCGCAGCAGCAGCA
ACAGGCCGTGCAACAGCAACAGCAGCAGGCCGTGCAGCAGCAACAAGTTGCCTACGCAGTTGCCGCCTCACCACAGTTGC
AGCAACAGCAGCAGCAGCAGCAACACCGACTGGCCCAGTTCAACCAGGCGGCAGCAGCAGCTCTCCTGAATCAGCACTTG
CAGCAGCAACACCAGGCGCAGCAGCAGCAACACCAAGCCCAGCAGCAATCTCTGGCCCACTACGGCGGCTATCAGCTGCA
CAGATACGCACCGCAACAGCAGCAGCAGCACATCCTTCTGAGCAGCGGCAGCAGCAGCAGCAAGCACAACAGCAACAACA
ACAGCAACACCAGTGCAGGAGCAGCATCTGCGGCTGTGCCCATAGCAACATCCGTTGCTGCTGTCCCGACCACCGGCGGC
AGCTTGCCGGACAGTCCCGCCCACGAATCGCACTCGCACGAGTCCAACTCCGCGACCGCCTCCGCGCCGACCACGCCCTC
GCCGGCAGGCAGCGTCACCAGCGCCGCCCCCACAGCAACAGCAACAGCCGCAGCAGCAGGAAGCGCGGCAGCAACAGCAG
CAGCAACTGGCACACCAGCAACATCGGCCGTTAGCGACAGCAACAACAACCTGAACAGCAGCAGCAGCAGCAACAGCAAC
AGCAACGCCATAATGGAGAATCAGATGGCTCTGGCCCCGTTGGGACTTTCGCAGAGCATGGACTCCGTGAATACGGCCAG
CAATGAGGAAGAGGTTCGCACACTTTTCGTCAGTGGTTTGCCCATGGACGCCAAGCCGCGCGAGCTCTATTTGTTATTCA
GAGCCTATGAGGGCTATGAAGGATCTCTTTTGAAAGTAACTAGCAAAAATGGCAAAACTGCATCGCCCGTTGGCTTTGTG
ACATTCCATACAAGAGCTGGAGCTGAGGCAGCTAAACAGGATCTGCAGCAGGGTGTACGCTTCGATCCCGATATGCCCCA
AACAATTCGCTTGGAATTCGCCAAGAGTAACACGAAAGTGAGCAAACCCAAACCACAGCCCAATACAGCGACAACAGCCT
CACATCCTGCATTGATGCACCCACTCACTGGACATTTGGGCGGTCCCTTCTTTCCGGGCGGACCGGAGTTATGGCATCAT
CCGCTAGCCTATTCGGCAGCCGCCGCCGCCGAATTGCCAGGAGCTGCTGCACTGCAGCATGCAACGCTAGTGCATCCGGC
CCTGCATCCGCAGGTGCCAGTGCGCTCCTATCTCTGACTAAATACAGACAAAGTAATGGAGCAGCCGATGCATCAAACTC
AAATGACCATGCCGCCACATCATCAGACAACTGCTATTCATCCCGGAGCTGCGATGGCTCACATGGCTGCGGCTGCGGCA
GCTGCAGCTGCCGGCGGAGGTGGGGGAGCGGCCACCGCTGCTGCGGCACCGCAAAGTGCTGCTGCAACAGCCGCTGCAGC
TGCTGCTGCATCACATCACCACTATCTGTCGAGTCCGGCGTTGGCCAGCCCGGCTGGATCTACGAACAACGCCAGTCATC
CGGGCAATCCACAGATCGCGGCCAATGCGCCCTGCTCCACGCTGTTTGTGGCCAATCTGGGGCAATTCGTTTCGGAGCAC
GAGCTGAAGGAGGTGTTCTCTAGCAACAGCAGCAGCATCAACAGCAAGCAACAATCAAGCAACAATCAGCAACAACAAAG
GAGCGGGTATGGAATCACGGCATGATTTGCTCGCTAAAAAGCTAGAGCGCGAAATGCAGCAACAGCAGACGCAAGTGCAT
CACCAGACGCAGCAGCAACAGCAGCAGCAGCAGCACCACCACACAGCAGCGCAGCACTACCACCACAGCCACCAGACAGC
GCACCACCAGCAGCAGCAACAGCAGCACCACCAGCAGCAACAACAGCAACAGCAGCAGCAACAGCAACAGCAGGCACAGC
AGCAGCACCTGAGCCACCACCACCACCACCATCATCACCATCAGCAGCAGTTCTTGATGACGCCGACAGCAACCTGACCT
TATGCGACAACGACGACGACGACTACGACGCCGCCGCACCACCACCCACATCAGCTCCACCAGCCGCACCACCAACAGCA
GCAGCAGCTGCAGCCGCACCACATCTACTCGTACGTGCTGCCGGCAGTCAGTCACATAGCGGCCTGAGGTGGCCACATTT
GAGTTTGAGAAAATCGAGGCAAAGAAGCTCCGCATGCAACGGATTCATGCGAGAAGTAAGAACCTTTAGTTCTAGGCATA
CAAAAATAACAGAAAAAAAAATGTTGAAAAATCAAAAAAAAAAAACTAAAAACAAAACAAAAATGCAAAAAGAAGTTAAT
TTATATATATATATGACGGAGAGGAAGCAGCTGCCGCAGACCCGTGTATAACCCCAGTTTAGTGAAATTTTTCGACAGGC
AACAAAAGATTTGTAGTGAAAACCAAAAAACGGGATAAACTTGTAGTAAAATATACAATTTACCATAGATCGAAAGCTGA
GCGAACTACTTAACTAAGTTAGTTGCAAATACAGCCGATATGCCCCCTATAAACGAATACACATATATACATACATAAAC
ACCTATATATACATGCATATATATATAGCAAGCTGATCGAGAATTTGTTTGTTATTCAATATCCATTTAATGTTCTTTTG
TAGCTTGATAAATTGATTTTGTTTGAAGTTTTTGTTTGTGAAATGTTTGCGTTCTTTTATTGTTACTTCTTACCCTACAT
TCAAAACCCCCCCCCCCCCCCCAAACATAAACGACTTTTCACACAAGGAATTGAGACATGAAATTCGTATTAATCTCATA
ATTTCTAATTTTTCGATATATCAAACAGCGTAAGGGAATAAATTATGAACAAAAAGTGTAGGGAGAAAGAAAAGTATATA
ATTATAGCTTAACCGAATGTGCCCTTTAAATAGCTCTCTTTCTAGAATTATAAAAAAGTAATATGAAACAGAAAAAAAAA
AACAACCAAAAGAAAACAATTTAAATGTATGCATTAATGTAATAATTGTATAACTAGTAAGGTAAATTTTCAAAATGTTA
CTCAACAAGAAAATTCTACAAAACAAACCACAACGAGTAGTCGACGTCATCGTATAAATTTAAATTTATATTGAGGAATA
CTGAAGAAAGCTGGTTTCGAAATTTATTTGTTACAAACGTAAGCATAACAAAATTTAAATGTGAATTTCAAATTTACCCG
ATAAGGACCTATCGACGACATGGGATGAACGTTGCACGTGCGCTGTAGTGAAGCAAAGACTCGAGAAAAAAACCGATTTT
TAAGAAACAAGAAACCAGAAATGCTGAAACTGCTGGCACAGGACACTCCAAAACTTTCCGCCCAGAACTCTATGTTTTCT
TTCGCCACTTTTGGTTGAGACTTTTCTGCGTTTCCCCTACAAAGACTTGAACTTTTACTAGAGGCCCCCAAATCTGCAGG
ACTTCATTTACATAGTGAGAAACTTTATTCCTAACCAACTTTCGAAATGCTAGAACAATCAAATCACATTTCTTGCTAAA
CCAACGATCGATTTAATGGGGTGGGGGAGGGGAGGTCGCAGAACGAGATCGTATGCGTAGGTATCGAATATCGGATACCG
TGTGAGGGTGGGGAGAGTGCTTAAGAGGTAACAGCAAACAAGGACGAGTAAATAAAATCAATGGCATATCATCTTACGTA
GCAAAGCATAAGTCGAGCATGTATGTGTGACTACAAAAAGCGACAAATTCTATTGTAACTAAATGCAAGAGCAGCAGAAC
AGCAGAAACCAACTATAATTAATTATTATAAAAACAATGTAAAGCTTAAAGGCTAACAACTATATATAGTTAAATACGAA
AACAAATTGTAAGCAAGCTTTTTACATCATAATTTTCGAATGGTTTTCGAAAGAGTTCGTTCAGCCTTGTTTAAACCAAT
ATAAGTATATATATATATACGGATAAAATCTTACATTTTTACCAAAGTTGTCCTTACTAATTAAACAAGTTATGTTAACC
AATTCACACACAATTTGTTAAACAAAAACAGAAGGAACCCACGAGTAAATCAACTAATTTTAAACGTTTTTTAAAGCTTA
GTTTAGTGTAAACGTGACTAGACATACCAAAGGCATATTTGAAACAAAAACCACAGTTGTTAGAAGGAAATATGAAACAA
AAAGAGAAACATTTACTAATTGGTACTGTTTTAGCCCTTTTTCCATACAAATTTTCTTTAAATATTTAATTACATTATTT
CCCCGTCTAACTTTAGTCGAATGTAAAATGCATATTCCGTCCAATTACATTTCGTGCTTTCCTCTTGCCCAAAAAAAAAA
AAAAACATCATCTCTTCGCCAGCATCGCGTTGGTTTAAGAGGCATCATCATTCGGAGTTAAGAACAGAGGTCTACATATA
AGTCTGTAATCCTAACATACACACACACACACACACGCACGCACACGCTCACCACAAAGACAAGTAAATTAGTTAAAGTT
TTAGCGTGTAAGCAAGGAAAAATGTTTAATTATACATAATATACTAATGCATATCATTAAATTGCGCCTTTCAAAACAAT
TAAGAAAAACAAAATGCCCGACGATGGAAAACAAAAATATTTACAACTATAAATAAGCATAAATAACGAAACAAAAATCG
ATAGATGCTAAAGTACGAAACAAATATTTTCGAAATTAATTTTTAGCGCCTAAGTGTGGTCGACGAGCCCAAAAGTATGC
AACAAAAGCAATGGAAGTACGCATAAGTGTGTGAGTGTGCAAAAGTGTGTGTGCGTGTGTGTGCGTGTGTGCATCTGGGA
AAATCTTGTGCAATTTTCATTGAAGATAGTAAGCGATAAGAAGAGGGAAAACCAGCGCGTTGGCAAGGTTGTTCAGTCCC
CACCCCCAAATAGAAAAAAAAACCATTTTGAGGCTTGATTTCCAAACATTCTTTAAGCTAAATTTCATAGCTCTATATAC
ATCCAGATTTTACATATCTGCAGCATGCAAATATTAAACTAAAAATTGGGAATATCTCGAAAACACAACAGAAGATGAAA
ACCTAGCTCGTTAGGGATAAACTAGAGAATGCTAAAATGAATGACAGAAAAACTAAACTAAACAATATGAATTATGGGAA
CATTATATGAATATATACATACGCATATATTAAAACATTTTTGAAACAAAACGAAAACCTAATAATAATTACAAATGATG
GAAAAAATAACAAATACATATCAGCAAAACGGATAAAGAAGAAAACTTTTACAAGCAACATTATTAAGGAACATAAAACC
GATATGTTTTGATGTGGTTTTTAAATTTTTAAACATTGTAAGCGCAAAAAGGCAGAAAGCAGTTACCAAAAAAAAAAAAT
TAAGGGGGAAGCAAGCATAACTGATTGAAAGCTTAGTAATAGATTACGGAACTACTTACATAATGCCTAGCTATATGCTT
ACCTAGTAATGTCATATCTAAATACATATGTGGCAGCAGTAATAGCAAGACAGTAAAAGTAACAGTAAAAATAACGATAA
AAATCAGTAACAGTATATATCCTACTCTATTGTATTTATTGTACGGCTATAATTTGTGTATCGAAAATCTTTGATTGATT
GATTTCTATTTAGTTTAAGTTGCCTCCGAAATTGCCTTATGTTTGCCTAAAAAAAAAAATAAAACTAAAAATTTAAATTA
CCAACAATTTAATACTAATTTCTAAGTAATTTATATGTATATGTATGGTATACCTCTATGATAAACCCTTATATAAATAT
ACTTATATCATTTGTGTAGCCTTAACTTAGAACTTTTCAATTGACGGTATTAATTACGCATAATAAAACTTTATATTTTG
TTCGTTAAACAAACCCATTATTGTTTCACTCAGTTCCAAATCTCACACAACCAAGCGATAAACCTTTGAAGAAACGAATT
TTGAATTAGTGACAATTTTTGCAAGAAAATTAAAACCAACTATACAATTACATATATTAATACCACATATATGCATCGCT
CTCCCCATTTCAAGTTTTGAGTCATTTGCGGGAGAGTCAACTAGAATGGCATTGTACTCAACCTGGTAGGTCTGAGAAAA
TCGCTGTATATTTGTAATACTTAAATACTATGCATATCTATATCTTATACAGACAGACATATGTATAGTATCTTTAGAGG
GTTAAGTAGGAAAGGTAACTGATATTGAATATTGAAAATATCAAGGCAGAGAAAGGTATCGAAATACCGGCAGATAAATG
AAGATAACACAAGTCAAAACATATCAAACTCGTGCCCGATTAAAACTATATATACACATATATATACACTATATATATAT
ATATATATATATATATATATTAATGAAAAGCAGGCGCAAATTAGGCGCAGCAAATTTCAAAAATAACAAAGAAGGAGAAT
GATAAAATTATTAAATATGCCGAAAGTCTAACGGGAAATGCAATTTTATTTGCATAACTCAACAGTTGAGTCTACTTTTA
TCCGTAAATAATACGAAAATAATGATTAATATTAATTGAGATATTAAAAGTAAAAAAAAAAAAATACAAGAAATGGCAAG
TATTTGTCTATTTTGAGGCTCATTTATTTAACATTTTCGCGAAACCAAGTACGACCTTCTTTTTTCAAATCGAATAAAGA
TCTTTGCTAATATTGTAAAAAACAAATTGATTTTTCAAGCAAATGAAAACCAAAACGTATAGCTAAATATTATTATAAAA
CTTACATAAAACAGAAACAAAACTCGTATATATATATATATAAATATAAATATCAGCCTTGTTCTTTATATATATATTTG
AAAAACCAAAAAAATGAAAAACCATACAAAATATTAATAAATTATTAACAACTATGAAAAAATTGATACAAAAAAAAAAA
ATACATAAAAAATATTTAGCGAAAATATTGTATTGTGAGTTTAAATGTATTGTTGCATACGAAACCAAAGAAATGACATA
ACAAATCGGTACACCTAAGTTAAATATAAATCTAAATGGCAATACCAACCGATTGGCAAAACAAAAAGAAAAAAAAACAT
AATATCATCTGATAATATCATATCAGATCGGATCAAAGCAGATCAGAGGAAATTCGAAACAGAATGAAAGGTGAACCATT
TTTTCACAGACAGCCACCAGCGATAAGAACTAACGAAGTTGAATTCAATTAATTTACCAGACAGTTTATTTCCAATATAA
TTCAATATTAGCAGATGGGCTCGCCCGCCCGCAAGACAAATTATACAATTTGATAACGATAATATTTTCATGCGATCACG
ATCGAGGAGGAAAGCACAAACGATATGCCCTGCAATGCAAACGGGGAAAAGAGCAACAAATTGCAGTTTTCAGCAGGCGA
CAAATTATAATAATACAATACGAATAATAAATAAAAACTTTAACAATTGTTTTGTGTAATTGT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          cpo-RN
          FBtr0330269
          5675
          cpo-RO
          FBtr0330270
          9118
          cpo-RP
          FBtr0330271
          5461
          cpo-RQ
          FBtr0330272
          4524
          cpo-RR
          FBtr0330273
          7247
          cpo-RS
          FBtr0330274
          9229
          cpo-RU
          FBtr0330276
          5086
          cpo-RV
          FBtr0330277
          8397
          cpo-RW
          FBtr0330278
          4469
          cpo-RX
          FBtr0330279
          6116
          cpo-RY
          FBtr0330280
          6131
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          cpo-PT
          FBpp0303307
          607
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          cpo-PN
          FBpp0303301
          606
          cpo-PO
          FBpp0303302
          748
          cpo-PP
          FBpp0303303
          841
          cpo-PQ
          FBpp0303304
          762
          cpo-PR
          FBpp0303305
          749
          cpo-PS
          FBpp0303306
          962
          cpo-PU
          FBpp0303308
          606
          cpo-PV
          FBpp0303309
          607
          cpo-PW
          FBpp0303310
          606
          cpo-PX
          FBpp0303311
          606
          cpo-PY
          FBpp0303312
          606
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          Unconventional translation start postulated (CUG encoding Met); FBrf0056119; FlyBase analysis (modification based on conservation across species).

          translation_exception: non_canonical_start_codon

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG43738-RT
          cpo-RT
          Secondary FlyBase IDs
            References (0)