FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\shn-RF
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General Information
Symbol
Dmel\shn-RF
Species
D. melanogaster
Annotation Symbol
CG7734-RF
FlyBase ID
FBtr0330620
Feature type
mRNA
Associated gene
Dmel\shn
Evidence Rank
Length (nt)
9886
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 38 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
    cDNA Clones, End Sequence Only (ESTs)
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
    Sequence
    Sequence Downloader
    CTGTTTGTCCGTGAACGCCGACGTCGACGCACGCCTCTCGTTTTCGCGCGCTTCTCGCACTTCTCGGTAAATGCGCAAAA
AAGCCAGCAACGAAATCAAATCAAGTCAAATCGCAACGCATGGTGAATAACATGTCCGTTTTATTAATAGATTCCGCAAC
AGCCATATAGCGCATATTTCGAAAGAGATATATAATATATATGAAATAAAGTGAGGCCCTCGGATGAAACAGTGTTGATA
AGGAGTGTACATACATACACACACGCAGCACATAAAACTGAAAGAATTCGCGGCGCGCGCGATTTAGTTGCGAATATTGC
GTATACGCAGGGTCTGTCAAAAGTAATACAAATCAAACAAAACCTACCACAACAAAAATAAGGAACGGCATATCAAACCG
AACATTTCCGAATTGAGGTTTTTTTTACACAGCGAGCAGAGGATACGCCTACATGGATTTATATAGCACAATTACAGCAA
CCAAGGATACTGAGACTTGGGCAGGATAGCAGCGATGCCAGCCAGCGGGTTGCAATCTCCACCAGGTCGACAGGCAAGCG
GCATATCAGGATAATACCAGGGACTTGGACATCATGGCTCCTCTATTTGTCTAGTTGGCAAATACCAGCGAACCGGGAAC
CAGGCCACACACACACACACCCATACACTCGCTTACACACACAAACACACACACACGCGCGCGCTCATACGCTCAGACAA
ACAAGGACGCTTGTCATTGTGTGCGTCAAGGACGTCGACACACGTACAAGCTTTGTTGCTGTTGTGCCATACAAACAGAC
CAGAACCAGTGTCGCAAGTGGGCGTGCCAGCGGGTAGGCGGCCTCTGATTAAATATACATCAGTCAAGCGCAAGGATCCT
AATTTCCAGCAGTATTGTTCTGTGCAAAAGGACAACGGGACAGCGGACAGCGGACAGCGCCAAAACGGGACACCAACTTT
GAAGCAGGGAAAATGGCGCGACGCAAGGGCAGCGGTCGAGGCAAATCTACTGTGAATTCACGCAAGAGTGCTTTGGAAAC
GGCGCGAGAAAAGACAAAAGATGAGCCCACTGCAAATACGTCACAGGATAATAAATTCGATAATAATATGGAAAATGCAA
CCACCACAACGGCCAAGCATTACAAAACCGCAGGCAAACAGTACAAGACCAATAAAGTGAACAATACGCGACGTGCCACA
GCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAACCACAACAGTAACAACAGCAGCAACGCCAACCAAGAAGCGGACATA
TCGGGAAACTGCAACAGCAACCATAGTCACTCAGAGATCAACCAACAAGGCCAACATCGCTGCAGCAATTGCATTGGCAG
CAGCAACAGAGGCAACAGCATCAGCATCAGCATCTGCAACAGCAACAGCAACAGATGCAACATTAACAGCTTCTAAAGCG
GCAGCAACAGCAGCAGCAACAACAGATGCTGCTAGTGGCAACAGCAACAGCAGCAGCAAACCCAGCACAAGCACACGAGA
TAAGCTAGGCGAGGTGCCGCTGCCGACTGTTGACAGCAACCACATCATCAGCAACAACAATAATAATAATAACAATAACA
ACACAAGTAATAATAACAACAACAACCACCACAGTGATAATAGTATTAGTGAGAATAATTATGAATTTAAGAGTAGAGAT
AAAGCAAGTCTAAGTGATAGCAAAATGACGCTACAACAGATGGCAGCAGTCAGCAGCAACCAGGAGCCAGTGGCTCCCAA
TGTGGCCAACACGATGAGCAACTCGAGCATCATCAACAGCCAGCAGACCACCGTAAATGCCACACCCGCCACCGATGAGG
CTCCGTTGGGGGATCGGTCAAATATTTCACGCTATCTGCACAAGAAGTTCAAACGTTTGGCCAGCACCACCGAGGTGGAC
AGCTGGAGTGCGACGAATGGCGGCGGAGCACTGCAAGCAAGTGGCGATGCCGTTCGCACCACATCGCTCTCCTCAAACAG
TTCGCTTTCACCGCCACCAACAACGCCGCTGGCCAACGGTCACCATCTGATGACCCAACAACAAAGCCACCAGCAAGTGC
AGCAGCAGCAGCAGCAGCAACAGACGCCGCCGCCTTCAGTAGCAATACATGAATTCAGTGCCAATTTTGTAAATAGCAAT
CATGTCAATGCCATTGGTCATGAGGAGAGCATCATCAGCAATAGTGGCTACAAAGCGGCGGGAAGAACGCGAACGCCTCT
AGCCAACAGCAACAGTAACACGAACAGCACCAGCAACAGCAACAGTAACCATGCAGCAAATGCCACACTGTCACCGGCTT
CATTTGCCCAGCATCAGCAATTGACGCAGCCAACAACAGTGAGTCCTGGTATTCCAGGCGGAGCAGCAGCGCCAAATCCT
GCATGCGAGAAGTCCGGACGATACGTTTGTCAGTACTGTAACTTGATCTGTGCCAAGCCCTCGGTGCTGGAGAAGCACAT
ACGGGCCCACACGAACGAACGGCCGTATCCGTGCGACACGTGCGGCATTGCGTTTAAGACGAAGAGTAATTTGTACAAAC
ATTGCCGCTCGAGATCGCATGCGGCAAGAGCGCGGGGCCTGGAAGTGCCAGCCGATGCGGACGATGGTTTATCCGATCAG
GATGCAGAGCTGAGCAACAGTAGTTCAGAGTTGCCGAGTCGCGCTGGTTCGCCTTACGAGGAGCCAATCAATTCGCCCAC
ACCCTCACCTTCCACACTGTCTGCGGCCAAGAGCGCATACATTCAACAGCCTCCGCTGCCCACTTACATGCAGCAATTGC
CTCTGGGCTCGCCGGCAGCAGGAACATTGCCACCCACCACAGCGGACAATCACCACTCGGCCACTGCCCAGCATCGCCAG
TCGATCGACTATAAGCCATATAAGCCCAAGTTCCACAATGCCTCGTTGTACTCATGTAGCAGTAAGGAGCTGCAACAGCA
GCAGCAGCAACTGCAGATACAGCAACAGCAACAGCAACACCAATTGGCGCAGCAAAAGCTGTCCATTCAGCTTCCTCTGG
TTCAGCAGCCGTCACTGGCGCATCCCACGCTTTCGCCAAGCACGCAAATGAAGATGAAGCACCACATTAACTCGCATCAG
ATCCAGTTGCAATTGCAGCAGCAGCAATCCCTTTTGGCCCAGCAATCATTGCTAGCTGCCATGCCACCTGGCGGGGTGTA
TTACCTGGGGCAACCTTCATACTACAACCAAGATACAGCGGCTGCCATTCACCAGCATGCGTTAGCCATTCAGCAATTCC
AAATCCACCTGGCACAGCAGCAGCAACAACAGCAGCAGCAACACCCACCGTTGGTCAAGGCGACACCACCAATGCAACAA
CCTCCGAGTCTCCCGCCGCAACAGTTGGTGCGTGCCAATAGCCAGATTTCCAGTGTAGCAACAGCACCAGCCACTCCCAC
GCCCGCCGCCAATCTCAGCACTTTTGCCAGCTCAAGTGGTGGCAAGCAAGTAAATGTGGCGAAAGTGCAGGAACACATTT
CCAAGTTGATCTCTCAAAATGAAGCCATAGTTGAAAACAAGGAGATATTGTTGCAGAAGAAGTACCCCAAACAGCTTAGT
CGTTCCCGCAGTTTCAACAATGCCAACAGCAATAATGCTTCGCAGCACGGGAGCAACGCGTCGGCATTGCATGCAAACAA
TAGTCAAAACAACACCAACGCACAGATGCCGGAGCGCGAGACTAAAGTGAATTTGGCACAGGCCATCTTCCAGAAACAGC
AACATCAGCTTCAGCAACAGCAACAGCAGCAGATAACCCAGCAGCAGCAGCAGCAGCTCGAGCAACAGAACTACTATACG
TACATCCAACAGCAACAGGAATGCCAACAGCAACAGCTCGAACCACCAAATGGGGTGGTTAAAAGGAATGCCTATAAGCC
TGGAGTAGTGATGACTACGCCGGTGAAGCAACAGCAGCAACTTCCTCCACCGCCGTCCCCGTTGCCCATGCAAACAATGC
AATATCGCCAGGATCCTGCAACACCAGTGACGAAAATTGAGCAACCGACGACGGCAGTGCCTGTTATGCCTCTGAATCTA
TCAGCGAAGCCTAAACCAACTCTGGTCACTGTGCCCGTCAGTTCCTTGTCCACCAGTTCTCTGGCACCGACTCCAACGAC
TTCTACCAATCCGACTAGTAGCTCCAAAACTGCTCCACCACCTGCTCAGGTTAATAACTCGATAATTAAGAACCTACTGC
TTAATGCTCGAGGATTGGCCGTGCCGATTGGCGAAGGCGATGATGCTGTTTATTCGTGTCCTATCTGTGCAAGCGAATTC
CGCAGTGCGGACGATTTGAAGCTGCACAACAGCACTTACTGTCAGGATGCGAGCTCAAGTGCCCCAATGAGTCCAGCATC
TTCGCCATTCCGCTCCAACTCGATCTCGCTGAGTCTACCGGAGCTGAAGAGCCACATGGCCAACTCGAAGAATCCCTTAT
CTCTGGCCAAGTTGGCCTGGTCGCAGTTGAAGACCAAAAGGAGCAGTTTGGTATTAAGTCGCCTAAGTGCAGCACAGACG
CCAGCAAGGACATCAACTGTAACAGCTCCCACTGTAACCGCTTCTGCCCCAGCTCCTGCTGTTGCTACGGTCACTGCTCC
ATCATCAGCACCTGCCCCCCAGATTGAAGCACTGCGCTTTGTGGATGCGCCTCTACCATCGCCTGGTCCATTGTTGGGAA
AAACTCCCTTAGTGGACTATGCTCAGCAAAGTACACCACGCAAGGCCCAGGATTCTGTGGTCATAACCAAAATGCACGAG
GATCGGCAATTTGTGATTGAAGCTCAGCCTGCCAAACGCATCAAGACTAGCGATTTGGTTGTAGCATCCTCCTCTCAGCA
ACCGACAAGTTTCAACTTTTCCTTTAATAATCAGAATAGCAGTAATAGTGTGCCGGAATTGCAGTCCTCCAAGGAGGAGC
GACTGCGCAGATTCACCTCTTCGGGAGGCAGCATGATTCCCATTTCGGAGTGCCCAGACTTGGACAACAGCCCCAAGATG
ATTAGAACACCGTTGCTGTCCGGCGGAAGCTTCCAGGATGTTTCGGTCAAAGTCAACAACGAAACAGGATCATCCAGTAA
GGAGCGCAAGCTGATGGCACTGGTCAGTGGCAGTGGACTTCTCGGCGTTAGCTCAGGTCCGCAGCACTTTCAATTTCCGC
CCATTAACTCAATAACTGCCTTCAATCCGCTAACGCTGCCACCGATGAGCGGTGGAGATAAAACCACTCCAGTAACACCA
ATACCTCATGTGCCTGGAATGCCAGGACCCGGTAGTCTGACACCACAAATGCCGCTACTGCCGCCTCCGCCACAACAGCT
GCAGCTACCCATTCCCTCTAGTCGAGGTCGCAGTCCAAATCGAAAGCAACCCAGTCCGCTGCTGTTGGGAGGAGGATCCG
GTGAACTGAAGGCCCTATCGCCATTCGGTGGAGTTCAGAATGTGCCAAGCGAGTTCAGTCGACAGCCACCAACTCCTGCC
CAGCGGCAAGCGCTGCAGTGGAACAGCAAGGAGGCACCGAAGAAAGCACCATTTAACTTTCTACGCATGGCTGATAATGT
GAAGACCACTGAACCTGAAGTTCGACACTTTAATTTGGAAAATGTGATTTCTGGGAAACAGCAAGAGTTGCCCCTAACAC
CGCTACATGTTGATACTCCCAACGGAAACGCTCCAGAAGAGACCAGTCCCGTAGCCAGTGCCTCAGCATCGGCGAAGTCC
AAGTTTCTGCGGCCTACTAGTTTGCCACTTAAACCCGGTACTTTTACTCCTAAACGCCATCATGGCATTACACCGACAGC
CAATACATTGCCGCTGATCTCGCCGGAGACCCCCAGGCCGTCCAAATCCTGTGTGCAACTGTATCTCAATGGACACGCCT
ACACATATCTGGGCCTCAAATGCAGCACAAAGATGTTTTACTGTACGGTGAACTGTCCACAGCCTTCGTATGTGGCAGGA
ATGCACAAACTATCGATGTATAGTGTGTGGCAGGTTTGCGAGGAGAACCAGCCACATCCACTTGGATTCAAACTAAAGCA
AGTTATGGCACTCTACGACTCACGTCAAAGGATGTTAGGAAATGGCAGCTCAACCGCCATGGCTGGATCGGGAAAACTTA
GCTACAACTTAGTCGCTTCCCAGCAAATCGTATCCTCCCCCTCGACGTCCTCCACTAGCAGTGCTTTCTATCAAGGACCC
CTAAAGACCCCACCCACTGTCACGATTGCCGCTCTCAGTGAGGCAAATGTGGCGGCCAAGGCGAATGAGGAGGCACAGGC
CAAAAAGTTGGAGACAAGTCCATCCGGGCAGCCCCTGGTGGGTGGCTACGAGTCTCATGAGGATTACACGTACATCCGTG
GCCGCGGAAGGGGAAGATATGTTTGCTCCGAGTGCGGAATTCGTTGCAAGAAGCCGTCGATGCTCAAGAAGCACATTCGC
ACTCACACGGACGTGAGGCCATTCACATGCAGCCATTGCAACTTCAGTTTTAAGACCAAGGGAAATCTGACCAAGCATAT
GCAATCGAAAACTCACTTTAAGAAGTGCATTGAACTGGGAATAAATCCGGGACCAATGCCGCCAGACAGCGAGTTCTTGG
ATGTAGATATGGACTTTGACCAGCAGTCATCCACTTCGGCAGGAGGACGCACATCATCGATGGCTGGGGAATCGGATTCC
GATGACTACAGTGATAATGAATCTGAAAGTAGTGATACGGATGAGTCCAAGTCGCGACAGAAAGAGCACGAAGCAGCCAG
AGGCCTACTCTCGTTATCAATGACGCCGCCCATACCGCAGAGCGTATCGCCCTATCCGCAGTTGCAGGATACACCCCTAC
CAGCGGCCAGTCCTGCAAACAGCATTGGCTCTTCGGGTTCGCAACCTAAAAGATTAGTGTGCTCCTTTACATCGCCGAAG
CCGCCTTTCGACTACCAAAAGCAGGAACAGTATTACTCCAATCCGGAGGAGTCCAAACCGAAACGGAGTGTGGCCAACGA
GGAGAGTGCTCCCATGGATCTCACTAAGCCACGCGGCTCCATCTTATTAATATCCCCCTCGCCTGTTTCGGTGCCCGCTC
ATGATCTTCCCAAATCGCAGGCCCAACAGATGCACGATGTTATCTTTGGAACCTCCGGCAACGAAAGCGGTTTCATGAAG
ACTCTAATCTCGGTTTCGGACAAAGTGCGAATATCTGCCGAAATGGAAGAGCAGGCCAAGCACGAGGCCGAGGGCGAGGA
TGTTCAACTACAGACCTACATTAAGGAGCATGCGCTGCATCAAGCCAAGATAAAGCAGAGTCAGTTTAGCCGCAGCTATC
TGATCAACACATTATACACAGCGGCGTCTCCTGTAATGAGCAGTAGTAGCACTCTCTTTACCGCCAACAGCAGGCCCGTT
ATGAGCGTAAATGAGGTACCTAGCATCGAAGTGCACGAAGTAAAGACCCCAGAGGCCATTGAGTCACCTCGGAGTGCACC
TGAACAGGCCCCGGTTATTCTTGCTCAGATTGCCCAGGAAGAAAACGAGGAGCCTAATATCGCAGAGCCACACAATGCCA
ATCTGCCTGCTGCAGTGCAGCAACCGGATGTCAATGAATTTACTGGAGTACTTGGAAATCCGACTGCACCACCAACATCG
TCTGTTACTGCTACTTCAGTAAGCACAACAACAGCTGCACCTGTGGCACCCTCATCCACTGCCAACTCAACTCAGCCCGC
GCAGCGTACTGTGATTGTGGGTGAAGATGGCTTCAAAAGCTCTACTCCCACTAGCAAGAGCGGCGATCTCCAGCATGTAT
CGTATGGCAGAGGAGTGCCGCCAGCTCCCATTGCAGGTGATGCACGTCCCACCTGCACCATGTGCTCCAAGACGTTTCAG
CGGCAACATCAGCTGACCCTGCACATGAATATTCATTACATGGAGCGAAAGTTTAAGTGCGAGCCATGCAGCATATCCTT
CCGCACGCAAGGACATCTGCAGAAGCACGAGCGATCGGAAGCGCACAAAAACAAGGTTATGATGACGTCGACTTTTGGTG
TTCCAACCACCTCAAATCCGCGACCCTTCGAGTGCACCGACTGCAAGATCGCCTTCCGCATCCATGGGCATTTGGCCAAG
CATTTGCGCTCCAAGACGCATGTTCAGAAGCTAGAGTGTCTGCAGAAGTTGCCCTTCGGGACCTATGCTGAAATTGAACG
TGCCGGAATTAGTCTCACTGAAATCGATACAAGCGACTGTGAAAATTCGCTGATATCACTCAAGTTGCTGGCCCAGAAAC
TGCAGGAGAAGGATCCTGGTAAGCTCAGTAGCTATACCACACCTTCTGGCATGATGCAGCTGGCCCAGGATGCAGCAGGT
CCCGTCTCGCAGGATAGTGCGTCCGAGGATGGCTTTAGTGCCGCAATTGCCTCGGCTATAGCTTCGCTGGACAACGACAG
TGCTGGCAACACACCCAAGCGAGCCAGCTCGATGTCCGAGGATGAAACGGTGGCCAATGGCCTAAACCATAGCCTGAAGC
GTCGTTTGCCGGGCAGTTTCAGCAGTACGGGCGAGGAGAGCGATAATCCACCGGAAAGCAGTGGCGAGAAGCGGGCTCGT
TCTGGCCAGGAGCTGCCTGTTCCCGTGGCCGTTCCCGTGGCTGCTTCAGCAGCGGCAAGCAACTGACAGTACATGTACAT
GCTGCAGCCCAGCTGAGGTTATCAGTATCCCGCGGTCTACCACCTGGACAGCAGTCAGTACGGCATCTACAATTCCAGGA
TCGAGGGCCGCCATGACCAAACCACCTCCAACGAGCGCATATCAAATGTCTAAGCATATCGCATATGGGCACACACACAA
CTTACTCTAGAGCTAGCCTATAAGACCCACCTCTCTTCGATGATGGGCCCAACTAGTATTGGGCTAATCGCGAGTAGTAA
TCAAACGATAGGGGAGCCAGATAAGCGAGTCAGCTATTCCAGTGTAAACACTCTAGGCGAATTGCGCTAAAATAATCATA
TACAAAGCCTTTTACGGTTTTAAAAGGCAGTCACCCCACACAGATCGTTTCGATCTGCCTCTTAAGTATTTAGGTTAAGG
AATCGTCATCAGCTAGCCCTAGTTATAAGCCAACCAACGAGCACACTTATAAATCTATCTATATTGTATACACTTAACCA
TAATTTGTTTTCGAAATGCATAAATGCAAAAACTCCTGAAGTGCTGTGAGTCTATCTACAAATGTAAAGATCCGAGAGCG
AGAGAAGTGTGTTATTTTTAAGGCCTAGCCCCGAAAATGAACCTCCAAACCGAACCAGAACACACCCGCACACTAAGTAT
ATTGGTTTTCTATGTCCAAATCCAAGTTTTGCCCTTTGAAAATCACGTAGTTCTTCCTTATTTCAAATTGTTATCACACC
AAGTTTTGAAGCGCAACTATTAACGGTGAATGAGAAATGACTTGCGCCCCTAGTTTTGTTTTAATTCTTTAAACAACGAG
ACCACGAGACTCATTTAATTGTTTCTTTTAATTTTGTATTTGACAGAAGAGAAACGAAATGATGAAAAAAAACGCTAACT
GTAAATAATCAATATGTTGTCATATATGCATTAAGCGGTAGGTTAGATAAACAAACTACACAAAGTTGATAGATATAAAT
GAAATATTGTACAAACTGCTATGGCAAGCGCTGCAGCAAAATCTATATATACACATAGATATATATCTATATATTTGAAT
GTGTGTATGTGGTTAAACAACAAGAAAATGAAGTGATCTATTACATTATTGTAAAATATATCAAAAAACTGAGAAAAAAA
AAAAACAAAACACAAACAAACATAAAATCTTATACAAAAAAATGAC
    Other Products of this Gene
    Other Transcripts
    Name
    FlyBase ID
    Length (nt)
    shn-RA
    FBtr0088098
    8940
    shn-RB
    FBtr0088099
    9552
    shn-RC
    FBtr0088100
    9026
    shn-RD
    FBtr0088101
    9886
    shn-RE
    FBtr0330619
    9011
    Polypeptides
    Derived from THIS transcript
    Name
    FlyBase ID
    Length (aa)
    shn-PF
    FBpp0303470
    2587
    Derived from OTHER transcripts
    Name
    FlyBase ID
    Length (aa)
    shn-PA
    FBpp0087200
    2532
    shn-PB
    FBpp0087201
    2532
    shn-PC
    FBpp0087202
    2532
    shn-PD
    FBpp0089118
    2577
    shn-PE
    FBpp0303469
    2532
    Comments

    Stop-codon suppression (UGA) postulated; reflected in aa sequence of predicted polypeptide.

    Transcriptional initiation site supported by short-capped RNA data (FBrf0209722).

    Transcript terminates at site supported by polyadenylated cDNA.

    translation_exception: stop_codon_readthrough

    External Crossreferences and Linkouts ( 1 )
    Crossreferences
    RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    shn-RF
    Secondary FlyBase IDs
      References (0)