FB2026_02 , released June 18, 2026
Transcript: Dmel\Hr4-RI
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General Information
Symbol
Dmel\Hr4-RI
Species
D. melanogaster
Annotation Symbol
CG43934-RI
FlyBase ID
FBtr0333343
Feature type
Associated gene
Evidence Rank
Length (nt)
8338
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 15 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        GTGTATCCCACGAGCTAGTCGCGCGCGGAAAGCAAACGCTTCGAAAATCAAACGATATTTCCGTTTTGACGTTTAACCCC
        CACCCACCCAAATAAAGCAAATCTAACTAAAGAGTCCTGCAAAAAAATCAACAGCTGCTTGATCTTGAAGCCTCCATATC
        TTGAAATCCTGCATCAGCCAACAGCCCCAAAACAAAACAAAACAAAACGAATGCAAATACACTAATGTGAACAACAACTA
        AATTGCTAGTGAAATGTTTTAAGCCAAATGCTGTGAGTGTGTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGT
        GATTCAAAGCAACCGCAAGCAATCAACTTGTAACGGTAGTCGGATACTCGCTTGCCCGCGGAGCATGGATATCGCCCCAG
        TTCCGCCACCACCATTATCGATATCCGTATCGCTTTCGGCTCCAGGATCAACGGTATTCGCAAACGCTGGCCACTAGAGA
        AGCGTCAGCCGAATGCCTCAAAGATGACACCGCTGCAACGGGACCAATTGAACCACCAACAATTTGTGCACCACTATTTG
        CAAAGTCAACCTGTCAATAACAAAATTGACAGCTTTGATATTAAACATATACGTAAAACCCAAAACCCGACCACAAACCC
        AAAGTTTCGAACTGAAGACCGTTTCAAGACAAGCAGCAAGAGCAAGATTACCAACCCGGAGAGCGGAAATACCCAACTCC
        ATTTTCATTTGAGTGAAACGCCAGACTTATCCGCCTCAACTTCGCTGTTGCCGTCAGCATTTGTTGCATCCTCCGCCGCC
        TTGGTGAATGTGACATGCCAGGCGGAGGAAGGACAAAGTTCAGCAGGATCACACTACACAGTTCATAGAGGGAATGACGC
        AGGCATTTCTTTTGCAGCGTTGGACTTTCGTTTTATAAGGAATTATGACACTGAGCCGTGGCCCGTACAGCGAGCTCGAT
        AAAATGAGCCTTTTTCAAGACCTCAAACTCAAACGGCGCAAAATCGATTCGCGATGCAGCAGTGACGGCGAGTCCATAGC
        GGACACGTCCACCTCGTCGCCGGACCTGCTGGCGCCCATGTCGCCGAAGCTCTGCGACAGCGGCTCGGCGGGGGCGTCGC
        TGGGGGCATCGCTGCCCCTGCCGCTGGCCCTGCCCCTGCCAATGGCCCTGCCACTGCCCATGTCGCTGCCCCTGCCCCTC
        ACGGCGGCATCTTCGGCGGTCACCGTTTCGCTGGCAGCGGTCGTGGCCGCGGTGGCCGAGACGGGTGGCGCGGGCGCGGG
        AGGAGCTGGGACAGCAGTAACAGCGTCGGGAGCAGGACCATGCGTCTCCACGTCGTCTACGACGGCAGCGGCAGCCACAT
        CCTCGACCTCCTCGCTCTCGTCCTCCTCCTCTTCGTCATCCTCCACGTCCTCCAGCACTTCCTCCGCCTCGCCGACAGCT
        GGAGCCTCCTCCACGGCCACCTGCCCCGCCAGCAGCAGCAGCAGCAGTGGAAACGGAAGTGGGGGCAAAAGTGGTAGCAT
        CAAGCAGGAGCACACGGAGATACACTCGTCGAGCAGTGCGATTTCGGCGGCCGCCGCCTCAACGGTGATGTCACCGCCGC
        CCGCTGAGGCGACGAGATCCAGTCCAGCCACGCCCGAGGGAGGCGGACCAGCTGGCGACGGAAGTGGAGCAACGGGAGGC
        GGAAACACGAGCGGCGGATCAACGGCTGGAGTGGCCATTAATGAACACCAAAACAATGGCAATGGCAGCGGCGGGAGCAG
        TCGAGCCTCTCCCGATTCGCTGGAAGAGAAGCCCTCTACCACAACGACCACAGGTCGTCCAACGCTCACGCCCACGAATG
        GGGTGCTGTCCTCCGCCTCGGCGGGCACGGGGATTTCCACAGGAAGCAGCGCCAAGCTGAGCGAGGCTGGTATGAGTGTG
        ATACGGTCCGTGAAGGAGGAGCGCTTGCTCAACGTATCCAGCAAGATGCTGGTGTTCCATCAGCAGCGGGAGCAAGAGAC
        CAAAGCAGTGGCGGCTGCAGCAGCAGCAGCAGCGGCGGGCCATGTGACGGTTCTAGTGACGCCATCGCGCATCAAATCGG
        AGCCACCGCCGCCGGCTTCACCCTCCTCTACATCCAGCACACAAAGGGAAAGGGAACGGGAACGCGATCGAGAGAGGGAT
        CGCGAAAGGGAACGCGAGCGGGACCGGGACCGGGAACGGGAACGGGAACAGTCCATCAGCTCCTCGCAGCAGCACCTAAG
        TCGGGTCTCCGCCAGTCCACCCACTCAGCTGTCCCACGGCAGCCTGGGACCCAACATTGTGCAGACGCACCATCTTCACC
        AGCAACTCACACAGCCGCTGACGCTGCGCAAGAGCAGCCCGCCCACAGAGCACCTGCTCAGTCAGTCCATGCAACATCTC
        ACACAGCAGCAGGCGATCCACCTGCATCACCTACTTGGCCAGCAGCAGCAGCAGCAGCAGGCGTCGCATCCCCAGCAGCA
        ACAGCAGCAGCAACACTCGCCCCACTCCCTGGTGCGGGTGAAAAAGGAACCGAATGTTGGTCAGCGGCACTTATCGCCGC
        ATCACCAACAACAGTCGCCACTCCTGCAGCACCACCAACAGCAGCAGCAGCAGCAACAACAACAGCAACAGCATCTGCAT
        CAGCAACAGCAACAGCAGCAGCATCACCAGCAGCAGCCCCAGGCACTGGCCCTGATGCATCCGGCTTCCCTGGCGCTAAG
        GAACAGCAATCGGGATGCGGCCATTCTGTTTCGGGTGAAGAGCGAAGTGCACCAGCAGGTGGCCGCCGGGCTGCCGCATC
        TGATGCAGTCCGCTGGTGGGGCAGCGGCCGCCGCCGCAGCAGCTGTGGCCGCTCAGCGAATGGTATGCTTCAGCAATGCC
        AGGATCAATGGCGTTAAGCCGGAGGTGATTGGAGGACCGCTGGGCAACCTGCGGCCCGTGGGCGTCGGTGGCGGAAACGG
        AAGTGGCTCCGTGCAGTGCCCCTCGCCGCATCCATCCTCCTCGTCGTCATCCTCGCAGCTGTCGCCGCAGACGCCCTCCC
        AGACGCCGCCCCGAGGCACGCCCACCGTCATAATGGGCGAGAGCTGCGGGGTGCGCACCATGGTCTGGGGCTACGAGCCT
        CCGCCACCCTCGGCGGGCCAGTCCCACGGCCAGCACCCGCAACAGCAACAGCAGTCGCCCCACCACCAGCCGCAACAACA
        ACAGCAGCAGCAACAACAGCAGTCGCAGCAGCAACAGCAACAGCAGCAGCAACAGTCGCTGGGCCAGCAGCAGCACTGCC
        TCTCCTCGCCGTCGGCGGGATCGCTGACGCCCTCCTCTTCGTCCGGCGGTGGTTCGGTATCTGGCGGCGGAGTGGGCGGA
        CCACTCACACCCTCCTCGGTGGCGCCGCAGAATAACGAGGAGGCCGCCCAACTCCTGCTCTCCCTGGGACAGACACGCAT
        CCAGGACATGAGATCACGGCCACACCCCTTCCGCACACCGCACGCCCTTAATATGGAGCGGCTGTGGGCGGGAGACTACT
        CGCAATTGCCGCCCGGCCAGCTGCAGGCTCTGAATCTCAGTGCCCAACAGCAGCAGTGGGGCAGCAGCAACTCCACGGGT
        CTTGGTGGCGTAGGCGGCGGCATGGGCGGACGCAACCTGGAGGCGCCGCACGAGCCGACCGACGAGGACGAACAGCCGCT
        CGTTTGCATGATCTGCGAGGACAAGGCCACCGGCCTGCACTACGGCATCATCACCTGCGAGGGGTGCAAGGGCTTCTTCA
        AGCGGACGGTGCAGAACCGACGAGTCTACACCTGCGTGGCGGACGGCACCTGCGAGATAACCAAAGCACAGCGCAACCGT
        TGTCAGTATTGTCGATTTAAGAAGTGCATCGAGCAGGGCATGGTGCTGCAAGCCGTTCGCGAGGATCGCATGCCGGGCGG
        TCGCAACAGTGGCGCCGTCTACAATTTGTACAAGGTGAAGTACAAGAAGCACAAGAAGACCAATCAGAAGCAGCAGCAGC
        AGGCCGCCCAGCAGCAGCAGCAGCAGGCGGCGGCGCAGCAGCAGCACCAGCAACAGCAGCAGCATCAACAGCACCAGCAA
        CATCAGCAACAGCAGTTGCACTCGCCGCTCCACCATCACCACCACCAGGGCCACCAGTCGCACCACGCGCAGCAGCAGCA
        CCACCCACAGCTGTCGCCGCACCACCTGCTGTCGCCGCAGCAGCAGCAACTTGCCGCCGCGGTGGCAGCAGCTGCGCAGC
        ACCAACAGCAACAGCAACAACAGCAGCAACAGCAGCAGCAGGCCAAGCTGATGGGCGGCGTGGTGGACATGAAGCCCATG
        TTCCTCGGCCCCGCTTTGAAGCCGGAGTTGCTGCAAGCACCCCCCATGCACAGTCCGGCCCAGCAACAACAACAGCAGCA
        GCAGCAGCAGCAGCAACAGCAGGCCTCGCCGCATCTCTCGCTTAGCTCACCGCACCAGCAGCAGCAGCAGCAGCAGGGAC
        AGCACCAAAACCACCACCAGCAACAAGGTGGGGGTGGCGGAGGAGCTGGTGGAGGAGCTCAACTGCCGCCGCACCTGGTG
        AACGGAACGATACTGAAGACGGCCCTAACCAATCCCAGCGAGATTGTACATCTGCGCCACCGCCTCGACTCGGCGGTCAG
        TTCGTCCAAGGACCGACAGATCTCGTACGAGCACGCCTTAGGCATGATCCAGACACTGATCGACTGCGACGCGATGGAGG
        ACATAGCCACACTGCCGCACTTCAGCGAGTTCCTTGAGGACAAGTCGGAGATTAGCGAGAAACTGTGCAACATCGGCGAT
        TCCATAGTCCACAAGCTGGTGTCGTGGACAAAAAAGTTGCCCTTCTACCTGGAGATCCCGGTGGAGATACATACCAAACT
        ACTGACGGACAAGTGGCACGAGATCCTTATCCTGACCACGGCCGCCTACCAGGCGTTGCATGGCAAGCGGCGTGGCGAGG
        GAGGAGGCAGCAGGCATGGTTCGCCGGCGTCAACGCCACTGAGCACGCCCACTGGTACGCCGTTGAGCACACCGATACCC
        TCGCCCGCCCAGCCACTGCACAAGGACGACCCGGAGTTTGTCAGCGAGGTGAACTCGCACCTGAGCACACTGCAAACCTG
        CTTGACCACGCTAATGGGCCAGCCGATAGCGATGGAGCAGCTGAAGCTGGACGTCGGGCACATGGTGGACAAGATGACCC
        AGATCACCATCATGTTCCGGCGAATCAAGCTCAAGATGGAGGAGTACGTCTGCCTGAAGGTTTACATACTGCTAAACAAA
        GCAGAAGTGGAACTGGAGAGCATCCAGGAGCGGTACGTCCAGGTGCTGCGCTCCTACCTGCAAAACTCCTCGCCGCAGAA
        TCCGCAGGCGAGGCTCAGTGAACTGCTCTCCCACATACCAGAGATCCAGGCTGCGGCTAGCCTGCTGCTCGAGAGCAAGA
        TGTTCTATGTGCCCTTCGTGCTCAACTCGGCGAGCATAAGGTAGCAGATGCTTGAGCACGGACTGCTGCCCACCGCCAAC
        CATCAGTCGGCGCCACCACCTGGTCCTGATACGATCCCGGAGCGGCAGCAGCAACAGCAACAGGAGCGGCGTCGAAGCAG
        GCAGCAGCAGCACCAGTTGCTGCGCAACCTGCCCAAGATCAAGATCGAGATCGGTTCCCAGCGCGATCCGGAGGAAGAGG
        AGTCGGAGCAAGAGCTAGAGCAGGAGCCGGAGCAAGAGCAGGATGTGCAGTCCCGACCCTCAGCCGCATCCACGTCCATT
        TTGAAGACTTCACTGCTGAGCGGAGCGGCGGCGACGTTGGCCACCTTGACGGCGGCAGCCGAGCAAATAGCCCGCTCCTC
        GGCCAGCTGCGACACTGCCAGGGATTATTCCCAAAGCAGCAACAGCAGCAGCAATAGCAACGCTGCCACAGGAGCAACAG
        GAACTATGGCCAGCGGCAGGACAGGCAGCAGCAACAGTTTAGAAGAGAGCAAAAGACTTGAGCATCAACAACAACAACAA
        CAACAGCAGCAACAACCACAACAGCATCAGCAGCAACAATATACATCAATACTACACACGGCCTTAATGTCACAGCGTTC
        CATGCCACCAGCGACATCAGCTACATCAGCAGCAGCGGCGGTCACATCGACGCCGACAACGGCAGCAACAACATCGCCTA
        CGCCTGCGCATGTGCTGAAAACAGCGGTGACCTTAGCCAGTCTAAGTGAGATAGCCACAGCACGTCAGCAGCAGCAGGAG
        CAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAATTGCTGGCGATGCAACAGCAACAGCAACAGCTAACGAAACT
        GCCCAGAAGGATAATCAACTTTGGCAGCAATCACACTGCCAACACTGCCACCAAAGCATTGGGAGCGGGATCAGAAGCAG
        GAGCAGGAGCAGGAGTGGGCATGGCCACAGCAACGGCAACAGCAACAGTTGGACGCAATCGCCAACTGGGCCTGAGTCAG
        GGTCAAGTGGTGAATGTCAGGACAGCACGCCTGCTCAATGGCAACTGTTGCGGCCGATTGCAGGCGACAGCAGGAACAGG
        GGCCAGCAGGGGCACCAACACTGCCGGCAGCAACACGGTCAACATGCAGACCCAGACCGACGATGAGTTGCTGCCGCTGT
        TAGCCATGCTCCCACAAGACGCTCCCACAACAACAGGAGCAGCAGCAGGAGCAGCAGTATCATTATCATTATTAGCCACA
        GCCACAGCCACAACCACATCTTCATCATCATCATCATCATCATCATTATCATCATCATCGACGATTTCATTAGCAACACG
        TGCAGCAGCAGTAATGCAGCAGCAGCAACAATGGACTGCCGTGTCGACGACGCCAGCAACAGGAGTGATGATGACGACGA
        CGACGACACAATCACAATCACAAGCAACATTAGCACCACAACAACAGCAACTATCACTGCCACAACAAAAGCAACAATTT
        AATACGAGAATAAACAGAAAAACAACAATTACAACAGCCACCACAACAGCACCAACAGCAACAACAGCAACAACAACAAC
        AACACGAAACAGCAACATCAACTTCAACAGCAACAATAACTATATGAATAACAATAATATAAACGCCGCCACTGCCAGAG
        CCTCTGCCTTCGCCTCCGCCTCTGCCATGGCCACGGCCACGCCCACAGGCACACCCACTGCCACGGGCCCGCGCCAGAGA
        CCGGCCCCGCAACCGCCCCCGCCCCCGCGCACGCCCACAGCCACCTCAGCTTCTGTTACTGTAGTTGTGTTCAAAACAAT
        GTTACCTGATGACTGAATTATTTTAGAATCGTACACATAGAGCATGTTTTATTATGATTACCACTATGATTACCACTTAC
        GATTTACGATTACGATTATGATTACGATTATGAGTATGTCTGGATATCATTACCTATTAACTATTCATTAGTTATGGATT
        ATCGATTATTACTATTTTTACTATTACTATTGCTACATGCATAATGTAGAGCCTAATTGATCTATCGTGTATTTTAGTTT
        GTCTAATTGTTGGATCCCTGTACTATATCCCACACACATACACACACTCTCACCCATATTTGATCCTCACCCCCAAACAA
        TCCATAAGCACACACTCATACACACACACACACACACACACACATTGCCGTTACTAAGGAAGGGTATGCGCATATGCGAA
        GTTGAAACATTTTAATCATGTATTTTTTTTTTTTGTGTTTTTGCTGAACGGAGATGAAAGTTAAGGAGGTCGAGCAACAG
        CAATTAGAAGTGTTAATTGAGTAGGATTATGAGTACGTAGCGAGTATGTAACGAGTATGTAATGACTAAGTAAAGTTTAC
        GTAGACACAATGCCACACACAGCTATAGCAAGCATTTAGGATGCGTGCATATGTCAGTTATCTATTTTTTTTTTTTAAAC
        TAAAATCTATATAAAGTAACGAGAGAGGAAGGAAGAGCGAAGCAGGGCGGGAGATTCAACCACATAAAGTATAAATAGTA
        GAGCTTGAGCCAAGTAGCTAGTTTAGTGTACATCCGTTTTGGGGCAGGGAAGTAGAGCAATTTGTTGACGAGTCGGGGTG
        GTGGGGTGAGCGGTAACGAAGATCGGTAACGGAAGTGGAGACAAAGCGGAACCGGAAACGGGAGCTGGACTGCCAGATCG
        GAATCACACATCAACCATTATGAGAACTTCGCTCGCAACTCTTGCAGAATTATACTGTTAGATCCTGTTAGTTATCCAAC
        CCAAAACTCCCAACCCACACACACTATACCTAAGTTAAGAACGCATAATCACATACTACACATAAATTACGCATAGTACA
        TACAAAAAAGATGAAGAG
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0333341
        8403
        FBtr0333340
        8596
        FBtr0333339
        9374
        FBtr0333338
        8417
        FBtr0333337
        9386
        FBtr0333342
        8406
        FBtr0333344
        10003
        FBtr0333345
        12551
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0305535
        2123
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0305533
        1518
        FBpp0305532
        1529
        FBpp0305531
        1842
        FBpp0305530
        1611
        FBpp0305529
        1986
        FBpp0305534
        1863
        FBpp0305536
        1843
        FBpp0305537
        1843
        Comments

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

        Stop-codon suppression (UAG) postulated (FlyBase analysis); reflected in aa sequence of predicted polypeptide.

        translation_exception: stop_codon_readthrough

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG43934-RI
        Hr4-RI
        Secondary FlyBase IDs
          References (0)