FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Nhe3-RJ
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General Information
Symbol
Dmel\Nhe3-RJ
Species
D. melanogaster
Annotation Symbol
CG11328-RJ
FlyBase ID
FBtr0333348
Feature type
mRNA
Associated gene
Dmel\Nhe3
Evidence Rank
Length (nt)
3001
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 67 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTCGCATACGGTTGTTTCCATATGAACGAACAAACTGTTTTTTTAGCGGAGTGCGCTGCTGTGAAATTTTGAAAGCTCT
TTTTGGACCCTTTAATTTTATGTAACGGCTGTGCGGCACATTCAATATCCAAGCGAAAGGAGGTCCACACACTCCCCTGG
CGCCGCCTGAGCGTGGTCGTCCTGCTCCGCGCTTCTAGCACCATCACCTCCACCACCACCCCCCCAACCCGTGAAACATA
ACGCGAAAATCGATTTCGGCTGCAGGCGCAGGAAGAAACTGAAGAAAGTATGTCCCACGGCGATGTGGACCCCGAGGTAG
AGATGACATCGCCCCACCGTATTCATGGGGACGCAGGAAGTCACCCAAGGTCGCAGACATTCTGGAAGCTACAGTGCTGG
CGGAGCAGCATGCTGCTCATAGTCGGATTTGCATTGTGCGTCCTCGCGCCTGGATGCAGCGCCACGGACACTGACATCGC
TCTGGACGCCAAGGCCACGCTCAATCACCGCATCCAGAGCCTGGACCTTCTAGTCTTCGTGTTCCTGCTGGCGCTCACAG
TGCTCACAATTTGGCTTTTCAAACACCATCGCGTCTCCTGGCTCCACGAGACGGGATTGGCCGTCATCTACGGCTTGATT
GTGGGTGCAATTATACGATATGCCGGCACCTCCGCCACCCTGGTCCACATGCAGGTGGAGCCTCAGGGAGTTCCAACGTA
CAGCGATAAATTGCCGCCTGATACTCTTTGGTTTAGGTACCCCGTTAATCAAACAAATGGCACAAAGCCGCCAGAGGGAA
TCAAGACGTATGCCTACGTGTTTCGAGGACAGGTACACGATGTGGATGAGAACGAAATCGATCTTAAGGCAACGTTCGAT
CCGGAGGTATTTTTCAATATTATCCTGCCCCCAATTATCTTTTATGCGGGCTATAGCTTGAAAAAGAAATACTTCTTTCG
CAACTTGGGTGCCATACTTACGTTTGCCATTGTGGGCACGACTTTGTCGGCCTTCCTAATCGGAGGCTTCATGTACGGCT
GTGTGAAACTGATGCCAAAGTACTTGAGTAGCAGTTTCACATTCCTGGACTCCTTATACTTTGGAGCTCTGATATCGCCC
ACAGATCCGCTCACCATTCTAGCCATATTCAACGATCTTAGGGTCGACGTAAACCTATATGCGCTAGTCTTGGGCGAATC
TGTGCTCAACGATGCCGTGGCCATAGTCCTTAGTGGAGCCATTCAAAATTATGGTGAACACTATTCCAATACCGGGGAAT
TCGAAACTACAGCTTTTCTACGCTCGTTGAGCGATTTCTTCTCCATCTTCTTACTATCCCTGATGATTGGCGCGGCCATG
GGATGCTTGACAGCATTGATGACCAAATTTACTCGGGTTCGAGACTTTCCTTTGCTAGAATCCGCGCTCTTCGTGCTCAT
GAGCTACAGCACCTTCCTGCTGGCTGAGGCTACGGAACTTACTGGTGTGGTGGCCGTGCTCTTCTGCGGCATCTGCCAGG
CTCACTACACGTACAACAACTTGTCGGAGGACTCGCGCCAAAGGACAAAACAGATATTCGAGCTCCTGAACTTTCTAGCC
GAGAATTTTATCTTTTCCTACATTGGCGTATCGATGTTCACCTTTCCCAAGCATCATTTTGACGCCGGTTTCATTATAAC
AGCTTTTATTTGCGCTGCCATTGGAAGGGCGGTGAATGTGTATCCCTTGTCCTGGCTGCTGAACATAAAGCGAAAGCCGA
AAATTTCCACAAACTTTCAGCATATGTTGTTCTTTGCTGGACTTCGTGGCGCCATGTCCTTTGCCTTGGCCATCCGAAAT
ACAGTGTCGGACGAACGACAGACGATGCTGACTGCCACATCGCTGATTGTCATCTTTACGGTTGTAATTCAGGGTGGGGC
TGCAAATTTCCTGCTTAATTGGTTGAAAATACCCGTTGGCGTGGACGATGAGACTGAACAACTCAATAACTATCAAGTGC
ACAGTTCTGATGGTTATTTGCAGGATGTGGAGGGCGGTGGCGTTAATCGCAACAAGATGCGCTTGTCCGGTGGAACAGAT
ACGAACTTGGACACGCCCGTCGATGGTACGAATGGCAGTTTGGGCGGAGCAAGCGGCGGTCGCCGGCGCAACAGCCACGA
GAAGGCCATTCTTGCTAGGATCTGGGGAAACTTTGATACCAAGTACATGAAGCCCTTACTGACGCACTCGCGACCCACTT
TGCTGGAGACGCTGCCCGTTTGCTGCAATCCCATTGCCAGACTGCTCACCACCACACAGCAACTAACGCAGGATGGAAGC
GAGTTCAGACGCGTGGACTCGGACTCGGACATTTGCATAGACAATGATACCGGGAACGGTCTCAGTCAGGATGGGTCCGG
AGCGGCACCAGGCGTGGGGCGTCGGAACTCCCTGAGTCGCACGGAGACCCAGACATGATTAACTTAGCCACGAGCCAGTG
AAATTGAAATCTGATTAACCAAAGCTTCTTAGAGCACAGCAGTCAGGAATGTTTGTTTATATTGTTCACTTTTAATTTCT
GTATTTTTCCTCATAATCTTATTTCTTAGATTCTAACACGCGACTAACCATATGGAGATTCTGGAGCATGTCCAAAGTCC
GGTGTCGACGAGAATCCGGCTCTTAGGATTTTACGGGAAAAAGTTATAAGGCACAGGCGCAGGCAAACATATACTATTTC
ATTTTTGATGTATTTTACACAACATAAACTTATAGCTTTTTCGTTCTAAGCCAGTTAGTGTAAATATATCGTTTCGAAAA
CGGACTAATTGTATTCGGTTTAGTTTTTAAGTTTCAAAGCTGATTCACTTGCTGATCTATAACATTTTCCGATATTACCT
AGGACCCTCCTATTTCTTACTATATATACGCTGTATTTAAAACAAAGCGAAGCTCTCTGAAAATATTAATTGTTGTGCTG
TTAATTTTTAAGTCAAAACCAAAATAAATAAATAAAAAATT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Nhe3-RD
        FBtr0273247
        3749
        Nhe3-RE
        FBtr0273248
        3362
        Nhe3-RG
        FBtr0273250
        3344
        Nhe3-RH
        FBtr0300327
        2819
        Nhe3-RI
        FBtr0333347
        2605
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Nhe3-PJ
        FBpp0305540
        682
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Nhe3-PD
        FBpp0271755
        711
        Nhe3-PE
        FBpp0271756
        687
        Nhe3-PG
        FBpp0271758
        681
        Nhe3-PH
        FBpp0289556
        696
        Nhe3-PI
        FBpp0305539
        604
        Comments

        Unconventional splice site postulated (AT-AC).

        Transcript terminates at site supported by polyadenylated cDNA.

        transcript_exception: rare splice-site pair, AT-AC intron

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Nhe3-RJ
        Secondary FlyBase IDs
          References (0)