FB2026_02 , released June 18, 2026
Transcript: Dmel\Sxl-RAA
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General Information
Symbol
Dmel\Sxl-RAA
Species
D. melanogaster
Annotation Symbol
CG43770-RAA
FlyBase ID
FBtr0336728
Feature type
Associated gene
Evidence Rank
Length (nt)
2068
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 47 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Sequence
        ACACTGCTTTGTTGTTGCCGAAGAAGGAAAGTCGCGCAGTGAATTTTTTTCTGTACCAACAACAACAACTAACTCTTCAA
        CTTCTACAACAACTACAACAGCGCGCCTACAAGAACAGCTATAATAAGCACACACTTAAAAAAAACCCCATAGGACTTAA
        GAGAGGAAAGCACAGTGAGCGTGCACACATGTAAAAAGAGAAAGAGAGCAACAGCAATTTTAGTACAACACAAGAAAGTT
        GAACAGAGGCAGAAGAGAAGTAACAGGAAAACAATAACAACGACAGCAGCAGGCCAGCTGAGAGCGCTGAGCGCCAAAAC
        AATTGAAGAGATCGATTGAATCTCGATCATCGTTCTTAACCTCAAGTCAACTGCAACTCACCTCATCATCCTTTTCCTGT
        AAAACCGAAACTCACCTTCGATCGAGGGTGTAACTTTTGTTGATTCGAAAAACACACTCCCAACTCTCAGGATATGTACG
        GCAACAATAATCCGGGTAGTAACAATAATAATGGTGGTTATCCCCCATATGGCTACAACAACAAGTCGAGACATATTTTT
        TTTCACAGCCCAGAAAGAAGCAGCCACCATTATCACCGAAAAGCGAAAGACACTCACTGACTCTTAAGATAGTATGTAGT
        TTTTATTTGCACGGGGGGGCAAACGCGCCAGCTCCGCCCCCCATGGTCTCCTCGCCAACGAAACGCAATGTTTTTGAATC
        GAGGACACCTCCAAAGCCCTTGGTGGGCGTGGATTTGGGATGTCCCATTCTCTGCCATCCGGAATGGATACAGAATTTTC
        ATTTCCAAGTTCATCGTCGCGTCGTGGTTACAATGATTTCCCCGGCTGCGGCGGCAGCGGCGGAAATGGTGGGAGTGCCA
        ACAATTTAGGGGGCGGCAACATGTGCCACCTGCCGCCGATGGCCAGCAACAACTCGCTGAATAATCTCTGCGGATTGTCG
        CTGGGCAGCGGTGGTAGTGATGATCTCATGAACGATCCTCGGGCAAGCAACACCAACCTGATTGTCAACTACTTGCCCCA
        GGACATGACCGATCGCGAGCTGTACGCCCTATTCAGAGCCATTGGACCCATCAACACGTGCAGAATCATGCGAGACTATA
        AGACTGGCTACAGTTTTGGTTATGCTTTCGTGGACTTCACATCGGAAATGGACTCGCAGCGTGCTATTAAAGTGCTGAAT
        GGCATCACAGTGCGCAACAAGCGGCTTAAGGTTTCCTATGCACGTCCCGGCGGAGAATCGATCAAGGACACCAATCTGTA
        TGTGACCAATCTGCCGCGTACCATAACCGACGATCAGCTGGACACGATCTTCGGCAAGTACGGTTCCATTGTGCAGAAGA
        ACATCTTGCGTGACAAGCTCACAGGTCGTCCTCGTGGTGTGGCCTTTGTTCGGTACAACAAGCGTGAGGAGGCCCAGGAG
        GCCATTTCGGCGCTGAACAACGTAATACCCGAGGGCGGATCACAGCCGCTGTCCGTCCGGTTGGCTGAGGAGCATGGCAA
        GGCGAAGGCGGCCCACTTTATGTCGCAGATGGGCGTGGTTCCAGCAAATGTACCACCGCCGCCACCACAACCGCCAGCAC
        ATATGGCCGCCGCATTCAACATGATGCACAGAGGTAGATCAATTAAATCACAGCAACGCTTCCAAAACTCGCATCCCTAT
        TTCGATGCTAAAAAGTTTATCTGAAATACAAATATCCAGAAACGAATACAAGATGAAACACACAAGCCACACACAAAATA
        TAATCAAGAGCGATCTGCTGGGTATATAGTGAATACATATATACCAATTAATCTTGAGAGTGTTTACATCTGAAACCCTT
        GATTCATTTTGTTTCTTTTGGTATTTCACAAACAACAACAACAAAACAGCAGGCTACGAAAAACAATCCAACCAACAACA
        AACATAACACTAACAACCAACAACAATATGAATGCATACTTAGTTTTATTATTTGCTCTTAATTCGGTAATTCGTAAATA
        ATTCAATTTATTGTTGCAATTTCGCAGTGCATATATATTATACTAATATATATGTCGTATATTTTGAT
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0331259
        2933
        FBtr0336729
        1800
        FBtr0346796
        1776
        FBtr0331260
        2020
        FBtr0331261
        1515
        FBtr0331262
        3097
        FBtr0331263
        2863
        FBtr0331249
        3263
        FBtr0331250
        3227
        FBtr0331251
        5164
        FBtr0331253
        1886
        FBtr0331254
        2130
        FBtr0331255
        1854
        FBtr0331256
        4309
        FBtr0331257
        2758
        FBtr0331258
        5964
        FBtr0331264
        4077
        FBtr0331265
        2112
        FBtr0331266
        3738
        FBtr0331268
        1910
        FBtr0331247
        2892
        FBtr0331270
        5164
        FBtr0331271
        4077
        FBtr0336727
        3317
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0307709
        48
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0303701
        314
        FBpp0307710
        322
        FBpp0312374
        331
        FBpp0303702
        48
        FBpp0303703
        344
        FBpp0303704
        354
        FBpp0303705
        314
        FBpp0303691
        48
        FBpp0303692
        346
        FBpp0303693
        366
        FBpp0303695
        346
        FBpp0303696
        42
        FBpp0303697
        354
        FBpp0303698
        48
        FBpp0303699
        344
        FBpp0303700
        364
        FBpp0303706
        352
        FBpp0303707
        42
        FBpp0303708
        342
        FBpp0303710
        354
        FBpp0303689
        344
        FBpp0303712
        722
        FBpp0303713
        708
        FBpp0307708
        42
        Comments

        Male-specific transcript supported by FBrf0047628, FBrf0054677.

        Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        Transcription start site supported by FBrf0054677.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Sxl-RAA
        Secondary FlyBase IDs
          References (0)