FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Ir40a-RF
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General Information
Symbol
Dmel\Ir40a-RF
Species
D. melanogaster
Annotation Symbol
CG42352-RF
FlyBase ID
FBtr0336971
Feature type
mRNA
Associated gene
Dmel\Ir40a
Evidence Rank
Length (nt)
2368
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 3 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TTTGAGACGTTTGACATTTGATATATAGAAGTTGATGCCATAATTGGACACCAAATAATTGTCAAAAGGAGTATATAAAA
AAGGAGCATAGCCCTGGTCCGATGATTCAAGATGCATAAGTTTCTGGCATTGGGCCTGCTGCCCTACCTTTTGGGATTGC
TAAACAGCACAAGGCTGACTTTTATTGGTAACGATGAGTCAGACACTGCAATAGCGCTCACCCAAATTGTAAGAGGCTTG
CAACAATCTTCTCTTGCCATATTGGCGCTACCAAGCCTCGCTCTATCTGATGGAGTTTGCCAGAAAGAGCGCAACGTTTA
TCTTGACGATTTTCTGCAGCGTCTTCATCGCAGTAACTACAAGTCGGTGGTATTCAGCCAGACGGAGCTCTTTTTTCAAC
ACATTGAGGAAAACCTTCAAGGTGCAAACGAGTGCATCAGCCTGATTTTGGACGAGCCCAACCAGCTGTTGAATAGCCTC
CACGATCGACATCTCGGACATCGCTTAAGCCTATTTATTTTCTATTGGGGAGCACGCTGGCCACCCAGCTCCCGTGTAAT
TCGTTTTAGAGAGCCGCTTCGAGTGGTAGTCGTAACTCGTCCTCGCAAGAAGGCCTTCCGCATTTACTACAACCAGGCTA
GACCCTGTAGCGACAGTCAGCTACAGTTGGTTAATTGGTACGACGGCGATAACCTTGGTCTGCAACGAATTCCCCTCCTC
CCGACTGCATTATCCGTGTACGCCAACTTTAAAGGTCGTACCTTTCGGGTGCCCGTATTTCATTCTCCGCCGTGGTTTTG
GGTAACGTATTGCAATAACAGCTTCGAAGAGGACGAGGAGTTTAACAGCCTAGACAGCATAGAGAAGAGAAAGGTTCGGG
TCACTGGTGGCCGCGATCACCGCCTACTCATGCTGCTATCTAAGCATATGAACTTTCGGTTTAAGTATATCGAAGCACCC
GGTCGAACCCAGGGCTCAATGAGGTCAGAAGATGGCAAGGATTCGAACGACAGTTTCACAGGGGGCATTGGATTGCTGCA
AAGTGGACAAGCTGACTTTTTTTTGGGAGATGTCGGTCTAAGCTGGGAACGGCGGAAGGCCATCGAGTTCTCTTTTTTCA
CACTGGCTGATTCAGGAGCGTTTGCTACACACGCTCCCAGACGCCTTAATGAGGCCCTGGCGATTATGCGCCCGTTTAAG
CAAGACATCTGGCCCCATCTAATCCTTACGATAATTTTCTCCGGCCCTATTTTTTATGGCATTATTGCCCTGCCTTATAT
TTGGCGTCGACGATGGGCGAACTCAGATGTTGAACATCTCGGAGAATTATATATCCATATGACGTACTTAAAAGAGATAA
CCCCACGCTTATTAAAGCTCAAACCCAGAACTGTGCTGTCTGCCCACCAGATGCCCCATCAACTTTTTCAGAAGTGCATA
TGGTTCACTTTACGTCTGTTTTTAAAACAATCATGCAATGAACTACATAACGGATACCGAGCCAAGTTTTTGACCATAGT
GTATTGGATAGCAGCGACCTATGTTTTGGCCGATGTATATTCAGCTCAACTGACCAGCCAATTTGCACGTCCAGCTCGCG
AGCCACCAATCAATACTCTTCAGCGCCTGCAAGCAGCGATGATTCATGACGGTTACCGGCTATATGTGGAGAAGGAAAGC
AGTTCATTGGAGATGTTGGAGAATGGGACAGAACTGTTTCGTCAGCTTTATGCTCTGATGAGGCAGCAGGTGATCAATGA
CCCTCAAGGATTTTTTATTGACTCTGTGGAAGCGGGAATTAAACTAATTGCAGAGGGCGGCGAGGACAAGGCAGTACTCG
GAGGGCGTGAAACACTGTTTTTCAACGTTCAGCAATACGGATCAAACAACTTTCAGCTCAGTCAAAAACTTTACACTCGT
TATTCGGCTGTGGCTGTTCAAATCGGATGTCCCTTTCTAGGTAGCCTCAATAATGTCTTGATGCAGTTGTTTGAGAGCGG
AATCCTAGATAAGATGACCGCTGCCGAATACGCAAAGCAGTACCAGGAGGTAGAAGCCACGAGAATATACAAGGGCAGCG
TGCAGGCGAAAAACAGTGAGGCTTACAGTCGAACCGAAAGCTATGACAGCACGGTTATCAGTCCGCTTAATCTACGAATG
CTGCAGGGCGCTTTTATCGCTCTCGGAGTTGGTTCATTGGCTGCAGGTGTAATTTTGCTGTTAGAGATAGTATTTATAAA
ACTGGATCAAGCGCGATTGTGGATGCTGTGCTCACGGCTGCAATGGATTAGATATGACAGGAAAGTGTAAGTCAGTGTAT
TTTATTTGCTGCAGCCGCTTTAAATAATACAATAAACGTCAGATCCTT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Ir40a-RE
        FBtr0334170
        1229
        Ir40a-RG
        FBtr0344025
        1160
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Ir40a-PF
        FBpp0307914
        732
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Ir40a-PE
        FBpp0306287
        280
        Ir40a-PG
        FBpp0310475
        223
        Comments

        5' UTR based on RNA-Seq data.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Ir40a-RF
        Secondary FlyBase IDs
          References (0)