FB2026_02 , released June 18, 2026
Transcript: Dmel\Mp-RT
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General Information
Symbol
Dmel\Mp-RT
Species
D. melanogaster
Annotation Symbol
CG42543-RT
FlyBase ID
FBtr0339904
Feature type
mRNA
Associated gene
Dmel\Mp
Evidence Rank
Length (nt)
4897
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 11 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          AGTCTCAGTCTCAGTCTGAACGCTGAACGGAGCGCATCGCAGGGCACCCACACGCGAATTGAGTGCCGGCCACAACGAAG
CGTGCTCCCCTGCGAAACGAAAAACATACAACTCGCGAATTTGCCGGCTGAGATTGGTACACTGCGAAATAAAACGAGAT
TTGTAGTGAATTACAAGAACGGAATAACCGAGAGTATATATATAGAAAAGGAAGCCGGGGCTCAAAAGAAAAGTGTCCGA
AGGCTTTGTGAAAAGTGTCCTGCTGCTGGAAACTGTCGCCCGAAACTATGCAGCAGTGAAAAAGGCCCACTTCCGCCAGG
AAATACGTGGAAATATTCAGTGCCATTCAGCTGGAGACTGAGACTCCCCACTCTGTTCAAGATGCGTGTGCTACAAGGCG
TAATGTTTGCATTGGCAATGATTTGCACGCTCCTGGTTCCAGTGCTAGGATCTTTTGAGCTGGTTGGACAGTCCATTAAA
GATGCCCTGGCCGAATACACACTGACCGACATCATGAACAACAACCAATTCGCGGGCATCGAGTTCGGTGAGGCGGAGGA
CGGCTTCCCCGCCTTCCGTTTCCTGCAGACGGCGGACGTGAAGTCGCCGTATCGAATGCTCCTACCGGAGAAGCTCTACG
AGTTCGCCATTCTCATCACTTTCCGGCAGAGCTCGCTGAAGGGCGGCTACCTGTTCAGCGTGGTGAATCCGCTGGACACG
GTCGTCCAGCTGGGCGTTCACCTATCGCCCGTCGTGAAGAACAGCTACAACGTATCGCTGGTCTACACGCAGGCGGACCA
GAACATCGGCCGCAAGTTGGCCAGCTTCGGCGTGGCTCATGTGCCGGACAAGTGGAACTCGATTGCCCTCCAGGTGCTCA
GCGACAAAGTGTCCTTCTACTACGATTGCGAGCTGCGCAATACCACTCTGGTCACCAGGGAGCCCATTGAATTGGTCTTC
GATTCGGCGTCCACTCTGTATATTGGCCAGGCGGGCTCAATTATTGGCGGAAAATTCGAGGGCTATTTAGAAAAAATCAA
TGTCTATGGTAATCCCGATGCCATAAATGTCACATGCATGCCGCCGCCAAAGGCAACGATTGCTCCCACCACGGCGGATG
ATGGTTCTATATTTTATGAAGGATCTGGAGAGAATATTCTTTTCGAGGATTCAACGGAAGCGAATATTTTAAGTGATGAT
TTTTGGAATACAGGCGATGAGGCGACAGACATCTTCGACGCCAGTGGAATGCAGCCCCCGGGACAGACGCAGTACACGCA
CGAGAGACCGTATCGCGGCATCAAGGGCGAGAAGGGAGAGCGGGGGCCCAAGGGCGACAGCATTCGCGGTCCGCCGGGAC
CGCCGGGTCCGCCAGGACCCAAAGGCGAAACGGCCCCCTATCCGCCCTTTGTGGAGACGACGAGTGCGGGGGCTAAATAC
ACTGGCGAGTGTACATGTAATGCGTCTGATATCCTAGAGGCCATCAAGGACAATGAGTCGTTGCGGGAATCGTTGCGAGG
AGCACCGGGCACGCCGGGCAAGGATGGAAAGCCAGGTACCCCTGGACACACCGGAGCCACCGGAGTGCCTGGAGCCAGAG
GCGCCCGGGGGTCCGAAGGTGCCCAGGGGCTGAAGGGCGAGCCAGGCGTCGACGGGCTGCCCGGAGTCATGGGTCCGCCG
GGACCACCGGGCCCGCCTGGTTTGCCCGAGAATTACGATGAATCCCTAATGGTCAACTCGATGGGCGCATTCCGGGGCAC
GACGCAGCCAGGAGCCAAAGGTGTGCCCGGCGAGAAAGGTGATGCCGGCCAGAAAGGAGAGCGTGGCGATCCGGGTCACA
AAGGTGCACACGGGCCCAGCGGCGCAAAGGGTGAGCCTGGCGAACCGGGAACACCCGGACTGCCGGGATTGCCCGGACAG
GTCGGACAGCCCGGCGGACTTGATGGCCTCGCCAGTGCCAATGGGACCAAGGGCGAGAAGGGCGAGAAAGGCGAGAAGGG
CATGCGGGGTCGGCGCGGCGGAACGGGTGCCACTGGACCAATTGGACCGCCCGGAAAACCCGGACCCATGGGCGATATTG
GACACTCGGGTCGTCCTGGCATGACAGGACCAAAGGGTGAAATGGGTCCCAAAGGACCAAAGGGTGATTCCGGCGGACGC
GAAGGGTTAAAGGGTGATAAGGGAGACCGAGGTCAGGATGGTCGCGATGGCTTGCCAGGACCTCCAGGATTACCCTCTAC
TGGTGGAGGCGATGGTGACAGCGGCGGCGTGCAGTACATACCAATGCCAGGACCACCAGGACCTCCGGGACCGCCAGGTC
TGCCGGGTCTTTCCATTTCTGGCCCCAAAGGAGAACCCGGAGTGGATTCGCGAAGCTCCTTCTTCGGCGATGCATCCTAC
TACGGACGACCAGAGCCACCGCGCCAGCCAGGACATTCCCACAAGCATGAGGAGACCCTGGGGCTTGTCGATGGCGAGGA
ACCATACTTCTCGGCATCCTCATCGAACATGAACATGAAGATTGTGCCCGGCGCAGTCACCTTCCAGAACATCGATGAAA
TGACAAAAAAATCGGCCCTGAATCCACCGGGCACATTGGCCTACATCACCGAGGAGGAGGCGCTGCTGGTTCGCGTAAAC
AAGGGATGGCAGTACATTGCGCTGGGAACTCTGGTGCCGATTGCCACGCCCGCTCCGCCCACAACGGTGGCACCATCGAT
GCGATTCGACCTGCAGTCGAAGAATCTGCTCAACAGTCCACCACCCCTTCTCAATACGCCAACGTTTACAACCGCGCCCG
AATACGAAACGTGGTATCCGCGAATGCTACGCGTGGCCGCACTGAATGAGCCCTCCACTGGCGATTTGCAGGGGATTCGC
GGGGCGGATTTCGCCTGCTATCGACAGGGACGACGGGCAGGACTCCTGGGCACCTTCAAGGCATTCCTCTCATCCAGGGT
ACAGAATCTGGACACCATTGTGCGTCCGGCTGACCGGGATCTGCCCGTGGTGAACACTCGTGGCGATGTGCTCTTCAACT
CGTGGAAGGGCATCTTCAATGGCCAAGGTGGCTTCTTCTCGCAGGCGCCGCGAATCTACAGCTTCAGTGGCAAGAATGTG
ATGACGGATTCTACATGGCCCATGAAGATGGTCTGGCACGGCTCGCTGCCCAATGGCGAGCGTTCCATGGACACCTACTG
CGATGCCTGGCACTCGGGTGACCACTTGAAGGGCAGCTTTGCCAGCAATCTCGATGGCCACAAGCTGCTCGAACAGAAGC
GCCAGTCCTGCGACAGCAAGCTGATCATCCTGTGCGTGGAGGCACTCTCGCAGGATCGCAAACGCAAGAAGCGGGAAATC
GGTGATGGCAGCAGTCACGGCGAAAGTGAAAGTAGGGAGTTCAAGACGGCCGATGAGTATGCAGCGCATTTAGAAAATTT
ACTGCTGTAAGCGGAAACGGAAGGAAGAAGAGGAGCGGCATCACACCGAACACATTCTCATGCATAAAACAAAACAAATC
ACAGCACACACCCACACACAGACACATGCGTGCACACATTGAATGTCAACGTGAATCATGGCCATGCATATAATCAGCGA
ATTCCAAACAAAAACCAAAAAGAGAAATACTCAGACGGCAGATGGATGTTGCATATAAATACATACTTATATTACCAGTA
CGCATACACACTACTCGTAGGTAATATGTCTAATATATTGCTAAACGTATATGATAAACACAAATAGATATATATCATGG
ATATATATTTGAGTTGTACTTTATGTTTAGGACACGGCACGAGCAAGCAGCAATTTTTGTACAAGCAGGAAACGTATTTG
TAGTTTGTAAACTGTAATTTGTAACTTACCGATAGCCGTAACCGAACTAATATCTAATTTTGTAATTACCTAAGCTCATC
ATTCACAACAAAAAAATAAGAAAATAAACAAAGAAAAAAAAAAAAAAACAAACAGCAGCGGAACACCCAGTCGCCTCCGC
CTACGCAATACTGGCCAAATTAGTATCCTACTTAGATTTGTATGGCAATGCACCCGAGAATCGAGAATCGAGCAATTCGA
AAAGCGAGCAACTCTTCACAGGACCCTGTATATGCGTGTATAAATGTGTATTTTTGTCAAAAGACTTCTAGGTGTGTGTA
CATTATAAGAAAGCCCCGCGTGGTTACTATACGAAAACGTTTTTAACTATCGCATGCAGCCCTTTCTGCCCAGTCTATAT
ACGATATATATATCTGAACTTTATATAGGATATACATATGTGTTTTACGACCGATTTCTACTGTACTCCTATCTTAGGCC
AGAGATTTTCTACAGCGTAGCTCGCGATTCACCACAATACACGTTATCGAATTCCGAATTGCATTTTCGGATCGCGCAGT
TCTTTTATATGCATCAGATGAGTAACGATAATGAAATTATAGCATAATCAACACACATAAGTACATACACAGCCGTGGAT
GGTAAATTCGTAATTTATTGTCATTCGATAACGAACACTTAACTAAATTCTAATTATAGTTACCGATAGTTAGTTACGTA
ATAATTTCTTTTTGCATTTAACCAATGCATTTCCAACTACAACATTTGTAATGTAATTAAACGTAATTGTAATGACAGTT
AAGGTATTAATTTAAAACAATAAACCACAAACGCAGAACACAAAGCGAATGGCGCGTTAGCCAATCGCACGGTGACATTA
TATAGTACGATTAAAGTAATATAAATTTAGTGAAATCAAAACTGAAGTGCAGAACCCTCTAGTCCTAAGCGTAAAAACAC
GAAGAGAAGAGAAAAGAAGAGCAGAGAGAGTGCATAACAGAGATACATAATAGCATAATATAATTGAATAATATGAAACA
ATAAAAAGTAAACTATC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Mp-RB
          FBtr0301105
          3906
          Mp-RE
          FBtr0301106
          4140
          Mp-RF
          FBtr0301107
          4167
          Mp-RG
          FBtr0301108
          3956
          Mp-RH
          FBtr0301109
          4245
          Mp-RI
          FBtr0301110
          2577
          Mp-RJ
          FBtr0301111
          3103
          Mp-RL
          FBtr0301113
          3800
          Mp-RM
          FBtr0301114
          3938
          Mp-RN
          FBtr0301958
          5126
          Mp-RO
          FBtr0306638
          3901
          Mp-RP
          FBtr0308094
          1145
          Mp-RR
          FBtr0309957
          3974
          Mp-RS
          FBtr0339903
          5162
          Mp-RU
          FBtr0339905
          4750
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Mp-PT
          FBpp0308936
          1022
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Mp-PB
          FBpp0290327
          1008
          Mp-PE
          FBpp0290328
          778
          Mp-PF
          FBpp0290329
          787
          Mp-PG
          FBpp0290330
          1023
          Mp-PH
          FBpp0290331
          813
          Mp-PI
          FBpp0290332
          257
          Mp-PJ
          FBpp0290333
          579
          Mp-PL
          FBpp0290335
          971
          Mp-PM
          FBpp0290336
          1017
          Mp-PN
          FBpp0291170
          792
          Mp-PO
          FBpp0297593
          1013
          Mp-PP
          FBpp0300437
          229
          Mp-PR
          FBpp0301686
          1039
          Mp-PS
          FBpp0308935
          804
          Mp-PU
          FBpp0308937
          973
          Comments

          Extended 3' UTR based on RNA-Seq and/or EST data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          Mp-RT
          mp-RT
          Secondary FlyBase IDs
            References (0)