FlyBase Transcript Report: Dmel\Caper-RI

General Information

Symbol

Dmel\Caper-RI

Species

D. melanogaster

Annotation Symbol

CG11266-RI

FlyBase ID

FBtr0344709

Feature type

mRNA

Associated gene

Dmel\Caper

Evidence Rank

Length (nt)

2561

Evidence Score

Genomic Location

Genomic Maps

JBrowse

cDNA Clones Consistent with the Transcript ( 69 )

cDNA Clones, Fully Sequenced

Exact Match

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

cDNA Clones, End Sequence Only (ESTs)

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

Sequence

Sequence Downloader

TCGATAAGTTCTGTGACAACCCTGAAGCCGAAAACAAGCAGCCACGCTAGAGAAGAAAATCTGGTTGAAAATTGGCAAAA
ATTCTAATTAAAAAATCGCAAAAGCCAAAAGAGAAGTTCACACCGAGCAGGGGACTTTTTTCACGGAGCACCCCGAATTG
CAGCGAAGTAATTTTCGAATATGGCCGAGGACTTTGATGTGGAGGCGATGCTCGAGGCGCCGTACATGAAAAACAGAATC
GAATAAGCTCAATATTGTTGCTAGAGATTGTTTTGGTCATTCTAAACACAAAAAGCTGGAGACCATTTGATATACTCCTC
CTAACTTGTCTGGGGCAGCAGGCAGCACTACTACTACTCTCACTCACAGTCAGACAAGAATGAAAGTATCGCTCAAATTA
CAAATTACAGATTTACGATAAACAGAAATCGAAATATAAGAATATATGACCAACACATAAGCCCAAAACGCAAAGCCAAA
GCCTAAAACAAACCAAACCTATTTGAACAAACAAAAAACACGACGTCTTTTTGAGAACCAATCAACCAGTCCACTCCACT
AGCCAGCGCTAAACATTCCCCCAAAACTGATCTGATTGAGAATGAGAATGAGCATGGGAAATTTGCCCATGTGGAGACAA
CATTTCTCGCCGTCGTGAACCATCTGTAATGTCAGTGCGGGCAGCGGTGGAAGTGGTGGACGCAAGCGCAGCGGCAGCAG
TCCAGGCGGCGGCGGTGGACACGATGACGACTACGCCGAGAATGGTCCGCGGAACGGCAGCGGCGGCGGAAGCTCACACA
AAAAGCAAAGCAAACGATCCCGGAGTAGAAGCGGCTCGCGTGATGGCAAATCTCGACGAGATCGCGGCAATGAACGCAGC
AGTCATCGGGACAAGGATAAGGAGCGCGATCGTAACCGCGACGGCGGCGACCGAGATCGACACCGCAGGGAAGGTGGCGA
TCGAGATCGGGAGCGGGAACGTGAGCGCGAACGCGACAGATCTCGTCGGAGTCGTTCGCGTGATGAGCGCGGTGGAGGTG
GTCGCTACGGCGATCGTGACAAGGATCGCCGCTCGCGAGATCGACGCGGCGGCAGCAAGTCGTTGCAAGTGGATCGCTCG
CGGGACAAGCGTCGACGCAGTCGTTCCCGCGATCAGCAGCGCAAACGGCTGAGTCCGATCCGTGAACGCAAGCGCAGCCA
TTCCCGCTCGAGGGACAGAAATAGCCGCCGTCGGGGAACCAATTCTCCGCGACGCCGCTCACCACCGAATGGAGCTGATC
GCACCACGCCCACCGAACTCAGTCCCGAGGAGCGGGACGCCCGCACCGTTTTCTGCATCCAGTTGTCGCAGCGAGTGCGA
GCCCGTGACCTGGAGGAGTTTTTCTCCAGCGTCGGCAAGGTGCGCGACGTGCGTCTAATCACATGCAACAAGACGAAACG
CTTCAAGGGCATTGCCTACATTGAGTTCGATGATCCTGAGTCCGTGGCACTGGCCCTGGGCCTCTCTGGCCAGCGGCTGC
TCGGTGTACCCATCATGGTGCAGCACACGCAGGCTGAGAAGAATCGTCTCCAGAATGCAGCGCCGGCATTCCAACCGAAG
AGTCACACGGGTCCCATGCGCCTCTACGTGGGATCACTGCACTTCAACATTACCGAGGACATGCTGCGGGGCATATTCGA
GCCCTTTGGCAAGATCGATGCCATTCAACTGATCATGGATACGGAGACGGGCCGATCCAAGGGCTACGGCTTTATCACGT
ACCACAATGCTGACGATGCCAAAAAGGCTCTGGAACAGCTGAACGGCTTTGAACTGGCCGGTCGGCTCATGAAAGTGGGC
AATGTGACGGAGCGACTGGACATGAATACCACCTCGCTGGACACCGACGAGATGGATCGCACGGGCATCGATCTGGGTGC
CACGGGACGTCTGCAGCTGATGTTCAAGCTGGCGGAAGGAGCCGGTTTGGCAGTGCCCCAGGCGGCTGCCAATGCGCTGC
TGGCTACAGCACCTCAACCGGCGCCGTTGCAGCAGCAGGAGGTGGCACCATCGATAGCCACACAGTGCTTCATACTGTCC
AATATGTTTGATCCGCGTACCGAGACAAATCCTACCTGGGACGTTGAGATCCGCGACGATGTGCTGGAGGAGTGCGCCAA
ACACGGCGGGGTGCTGCACATCCACGTGGACACCATTTCGCACACGGGAACCGTGTATGTCAAGTGCCCGAGCACAACGA
CCGCAGTGCTGGCAGTGAATGCACTGCATGGACGCTGGTTTGCCGGTCGAGTGATCACGGCGGCCTACGTGCCCGTGATC
AACTATCACACCATGTTTCCGGACTCCATCAACGCCGTCGATCTGGTGACGTCCACGCGCAAGAACACCGACGATTGAGC
TGAATGCGTGGGCAAAAATATTGTTAATATTCGTTACAAGAACTAATTTTTGGTCAAAACATTTTCAATTTTTTTAAAGA
CTCGACGCAAGCTGAAAATTAGGGGCACATATTAAAATACAATTAAATACATTTATAAATATATATGAATTTGAAAATTT
T

Other Products of this Gene

Other Transcripts

Name

FlyBase ID

Length (nt)

Caper-RA

FBtr0089640

2128

Caper-RB

FBtr0089636

2457

Caper-RH

FBtr0344708

2623

Caper-RJ

FBtr0344710

2453

Caper-RK

FBtr0344711

3145

Caper-RL

FBtr0344712

2484

Polypeptides

Derived from THIS transcript

Name

FlyBase ID

Length (aa)

Caper-PI

FBpp0311042

Derived from OTHER transcripts

Name

FlyBase ID

Length (aa)

Caper-PA

FBpp0088583

594

Caper-PB

FBpp0088579

594

FBpp0311041

FBpp0311043

FBpp0311044

FBpp0311045

Comments

Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide (may be non-coding isoform).

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )

Crossreferences

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

NM_001298772

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

CG11266-RI

Caper-RI

Secondary FlyBase IDs

References (0)

Report Sections

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