FB2026_02 , released June 18, 2026
Transcript: Dmel\Acox3-RD
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General Information
Symbol
Dmel\Acox3-RD
Species
D. melanogaster
Annotation Symbol
CG9527-RD
FlyBase ID
FBtr0345720
Feature type
mRNA
Associated gene
Dmel\Acox3
Evidence Rank
Length (nt)
2361
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 126 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TCAAGCATTTCGCGCCTAGCATTCGAAGCAGCCAGACCAGTCGCTAGAATCGAACTCCAACATGGTTGCATTGAGCACAA
ACGGCCGCCGGGAGGAGAAGGCTGCAGCCAACATCTACGATGACAAACGGATCTTTCCCGACTTCCGTAGCGGACCTTTG
GAAGAGTACCGTGAGCGGGCTAGCTTCTGCTACAAGCGCATGAACGTGGTGCTCGAGGGCGAGGATCACATACGGCTGAA
GCACAAGGTGTGGCAATGGATGGAACAGCACCCCGACTACCAGCGGGAGCCAGGATCCGATTTGGAACGCACCCGCGAAA
TGGCCAACAAGCGGCAGCATCTTCTGTGGGAGCAACAGTTCTACGGCGTCAACGAGTATCTTGGAACCCCACATCTTCTG
CTTGCTTTCGGACAGGCCATCTTTAGCTACGATTTCAGCACTTCGGTCAAGTTCGGCCTTTCAACTGGCATGTTCCCCAG
CACGCTGGTCTCCAACGGATCTGGCCGCCTGGGCAAGTACGTGGCCAAGATCGCGGACAACCGCATTTTGGGCGCCTACG
CTCTCACTGAGATTTCTCACGGCACCAACGCGCTCGGCATGCGCACCCGTGCCACCTACGATGTGAAAAGGCAGGAGTTT
ATCATCCACACGCCAGACTTCGAGGCGGCCAAGTGTTGGGTCGGTAATCTAGGCAAGACTTGCACGCACGCAATCGTCTA
CGCCCAGCTGTACGTGCCGGATGACAAGCACCAGGGCCTGCAGGCCTTCCTTGTTCCCATTCGGGACGAGCGTACATTGC
TTCCATTCCCCGGCGTAACCGTCGGCGATATGGGCGAAAAGATCGGTCTCAATGGCATTGATAACGGATTTGTGATGTTC
AACCAGTATCGTATCCCTAAGGCAAATCTGCTGTCCAAGACCGGTGACATCGATGCGCAGGGAAACTACACCAGTAAAAT
TAAGGACGAGCGTAAGCGCCTTGGCGCCTCCTTGGGTGCCCTCTCCGTGGGTCGCGTCAATATCACTGCTATCACGTATG
TGGCCTTGAGCAAGGCTGTGACAATTGCCACTCGCTATGCGGCCAGCAGACGCCAGTTTGGCCCTACCAACAGCCCGGCG
GAGTGGCCCGTGATCGAGTATCAGTCACAGCAATACCGACTAATTCCCCACTTGGCCACCACAATCGCCTTGCGGGTGGC
CACACTCTGGATAGGCAAAGAGAACGTGGATTTGACCATGAAGGGCTTCACTGGCGAGGACACGTCGCAAGCGGGCATGG
AGATCCATGCGATCTCATCGGCACTCAAACCAGTTGCCACTTGGGCTGCCAGGGATGGCATCCAGGAATGCCGCGAGGCC
TGTGGCGGTCATGGCTATCTTAAATCTTCTGGCTTGGGCGAACTTCGCAACGACAACGATGCCAACTGCACCTATGAGGG
CGAGAACAACACGCTCATCCAGCAAGCGTCCAATTGGTTGATCAGTCTGCAACGCAACAATGCCGACTTCGTGGCAGTTT
CCCCATTGGAGACAGTCTCCTTCCTGAAGGATATGGACACAATTCTGCAAAGCAAGGGTCAGGAGCGAACTCCTGCCGAA
GTTTTGGATCCGCTCAATCTACTTAATGCCCTCAACTGGCTTACCGTCTGGCAACTGGATACGACGGTGAAACGAGTTGA
GGAACAGCAGCGCGAAGGAAAGGATGCCTTTGAGACGAGGAACAACATCCAGGTCTTTGCCGCCCAGAAGCTCTCCATTA
TCTACGGCGAGCGCACCATCTACTACGTGTTTTATAAGTTTGTAATTGGTCTGCCCGACTCTGCTGAGAAGAAGGTACTG
CAGCAGGTGCTCTCCTTCTATGGCGCCCACTTGGTCACAAAGTACTCCGCTGCTTTCTACCGCGGTGGTTACTTCCGCGA
AAACTCTAACCAACTGGAGCTGTACGAACAGGGCATTCTGGCTCTGCTTCCCCTGCTGAAGAACGAAGCCATTGCTCTGG
TGGATGCCATTGCTCCCACAGACTTTATTCTAAACTCTCCTCTGGGCATGAGCGATGGAAACGTCTACCAGCATCTGCAG
CGCACGCTTGTCTCCACTCCAGGTGTCTACGAGCGTCCTCATTGGTGGCGTGATGTTACCTACAAGGATTACCTTAAGCG
CGCCAAATTGTAGACTCACAGAAAGAAGCATTCACATTCGGACAAGTGCATTATTAATGTTAAGTTTTCAAAGTTATTCT
GATAAATCACAGTATGATATTTGTTACGCACACAGCTCTACCTACACGCTCTACCCATTACGGTTTTGCAAAGAAATATA
CTCGGTACTTAAACTGACTCTTAATCGCTTTGACTTTTGTT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Acox3-RA
        FBtr0089948
        2222
        Acox3-RB
        FBtr0114603
        2237
        Acox3-RC
        FBtr0329952
        2603
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Acox3-PD
        FBpp0311763
        703
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Acox3-PA
        FBpp0088887
        703
        Acox3-PB
        FBpp0113095
        724
        Acox3-PC
        FBpp0302984
        703
        Comments

        Unconventional splice site invoked (AC-AC); sequence altered due to transposon insertion in sequenced strain; this splice not likely to occur in vivo.

        transcript_exception: non_canonical_splice_site (invoked due to sequence_alteration)

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        Acox3-RD
        CG9527-RD
        Secondary FlyBase IDs
          References (0)