FB2026_03 , released September 17, 2026
Transcript: Dmel\ckn-RF
Open Close
General Information
Symbol
Dmel\ckn-RF
Species
D. melanogaster
Annotation Symbol
CG12424-RF
FlyBase ID
FBtr0345947
Feature type
mRNA
Associated gene
Dmel\ckn
Evidence Rank
Length (nt)
3165
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 40 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          AGTGTCATACCATATGCTACCTGCTAATGGATTTCGGAGAAGCGAACGGCAAAGTGAAGCCACCAAAGCACCAAAAACCA
AATTGTTATTTAGATAAATATTTTGTTAAAGTTTTAGTTTTAATATATGGTGTCGTGCCTGCTGGAGATCTTCGCCCATT
TGTTCGAGGATGGAGGATTTCGATTAGCATATGCGGCTTATAGAGTTGCGGTCTTGTTATTATTGTTGTTTTGCTGCGAC
ATTCACTTCGACGGAGTTGGATCCATAGAGGAATGGCTGCAGCTGCTGCGTCTGGAGGAGTATATACAGCCCCTGCTGGA
GCAGAACTATAAGACGGTGCGCGACGTAACCCAAGTGACTTGGGAGGATCTCGAGGACATTGGCATTGTCAAGCTGGGCC
ACCAAAAGAAAATTCTGCTGGCCATCAAGCGTGTGAAGGACATAATTAGCGGAAAGTGGAACCCAGGCGGCGCCAATGCC
TACCAACAGCAGGAGTACCAGCGGAAGCCCTGGCAATTCAATGTGCCCATACCCAGTACGCCATCCTATGTGCCAACCAC
CCGCGTCTCGTGGGACGACACGAAAATCTACGCGACCAGCAGTGTCTTGAATTCCACTGCCCCATCCGGGAGCAGCTGCC
TCAATAGCAGCCTTGCCAACGGAGATGCCTACTACTGCACGGGCAGTAACCATGAGTGCTGCTCGGGCAACGATGTGGTG
CTCATTAAGGTTCGCCAGCCGCGCGGCAAGAGCCTGGAATCTTTGGAGGACATCCACGACAACAGCACGCGCAGCCATCT
GACCTTCAGCCATTACACAACCACGGACTACGGCCACTTTGGGCCGCCGACAACAGCGGCGGCTGCAGCGGCAATGGCCG
CAGCGGCCACACTGCAGCAGCAGCATCATCACCAGCAGCTGCTCCACCAGCAACAGCAGCAGGCAGCTGCCGCCCGTCTC
CTGGGCAACAATGCGCCTGGCATTGGATGGCGGCGATCCTACGACGACGGCGACATCACACCCACCAACGATGCCACGAG
GGAGCTGCTCTACGAGCAGGAGGGCGGCGGAACTCTGCCACGCCAGCAGCGTGGCATCCTGCAGCGGGCGGTGTTGAACA
CCATGCCGCCACTGGAGCACCATCACTACATGAATGCAGCGGCTGCGGCGGAGTACGGTGCGGCCAGCGGTGTGGAGGGT
GGAGCGAATTACATGGGCGGCAGTCCTTTGACGGGCAAGAAAATAGCTCCTGAGCCACCTAGACGCCACTGCAGCATACG
CAACTCCCGCACGCTGAGCGGAGAGGGAGTGCCGTCGGGAGCGGCTGCGCAGGCGCATCAGCAGGCAGCCCAACAGCAGC
AGGGCCAGCACATGTTCTACGGCCACACGGCGCAGCACTGGCAGCAGCAGCAGCAGCAGGCGGGTGCAGGTACTGGTCAG
CAGCCGATCTACGCCAACTATGCCACCATACAACAGACAACGGCGGAGATACACTGTGAGAAGTATCACGACAGTAAGTC
GACTTCCAGCATCGATTCGATTGACACGATACCATTTGCCAACGAGAACACTGGGACGATAAAACAGCGGCTGCTCAACC
GCCAGGAGCTGCAGGGCGGCGGAGCGGGCAACAACAATGTACCCGGCGGCGGCCATCCCGCACACCTGCACTCCTCCAGC
TCGAGCTCCAGCTCCTCCTCCACGAACACCATCGCGAATATAGCGCACTCGTTCCATTCGTTGAAATCTTCCAGTTCGCT
GCACGATGCCACATTGGCGCGGAGTGAAAGCATGGGCAGCACAGCCAGCGGTGGAAGTGCCTTGCACCTGCGTTCACCCA
CATTGGATATGTCAAATGCCGGTGGATCAACGGCGGAGCCTGCAAGTTCGCCAGAAGCAGCCGTACCAACTGTGGCCATA
AACAACGGCGTTCCGCCCAAAGTTTCGGTGAACGTTCTGAACGACATTGGCAATATGCTGGCCAATCTCACGGACGAGCT
GGACGCCATGCTGGAGGAGGAGAAGCGAGTGGGCCTAAACATAGACAGTGAATAAATCTCCAATCAAACAACAAATCGTA
GTGTAGCTGAATTTAGAAGTTGTGGTGTATCTTGTAATGTTTTATGTACTTCAACTTAGTTAAGTTCAATTTGTTTTTGT
ATTTCTTATTCCAATTGCGTGTGGAGAAGCATTTATATTGGATCGTATTCTGTATCATTTCGATATGCACACTGTGTAGT
AAAAAGCAACTACAACTGAAAAGCTTTGGACAAACCATGTATACTTTTGTACTTTTCCTAAACTCTCCTCCCATTCCCGA
AACTATGAGTGTTAACAATACAAAATGAAAATAACCAAGTAAAAGAATGGTAAATGAAGCGCAACATGCATATATGCAGA
ACTTGCATAGTTATTATATAGCATAAAATATATATAATTCGATATATAAATAAATATTTAAACGAAATCATTTATATGGA
CAAGTATTTAGTGGTTTGATACTATACGACAGAGGAGGAATCAACAAATAAACCACACGGCACACTCTTAAACAAACACA
ATGAAAGTCAGGCAAGAACTACTATTTAAAGATCCCATTCAGACAATTTCAAATTGTATTATTCTAGAATTTTGTACCTT
AGTTCTTTGTTCATTTTTTTCAAATCACGCTGCACAGAAATGTTTCTTTTTGTTATGATTACAACTAAAATCAAACTATA
TGAAATGAATGTATAATTAAGTGTTATTCCATACAAAGTAAAAAGATGCATTATATAAAATATAAATCTTATATTAGCGT
TAAATTAAGAAATCAAAAATAAAAGAAGGAAACGAATCCATCTTTATAAATTATGTTTAATCGGGCATTGATGCTGAATA
ACGTATGAAATTCCGTGGTATACAACTGAATTGCCTTCTTCTTTATAATTTACATAAATAAAAATCTTTTAGTGAAAATT
TTGTTTTTTGAGAGTATTTTCGGTTTTCTGTTAATTGCGCTCAGTTAAAAATATGTTTGGTGCGCATATCATTAGAGGAA
ATTGGAGTATTCGATTTATAAACGCATATAAGGAAAAGTAAACAAATTAAATACGAAAAAATCACAAACATGTAAAGCAC
ATAAAGGGCAAAACAAAAATGATGAAAACAAATAACAAATAAAGT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          ckn-RB
          FBtr0087411
          4039
          ckn-RC
          FBtr0087409
          4357
          ckn-RD
          FBtr0339987
          4120
          ckn-RE
          FBtr0345946
          4568
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          ckn-PF
          FBpp0311861
          642
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          ckn-PB
          FBpp0086542
          924
          ckn-PC
          FBpp0086540
          924
          ckn-PD
          FBpp0309008
          845
          ckn-PE
          FBpp0311860
          924
          Comments

          Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

          Extended 3' UTR based on RNA-Seq and/or EST data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          ckn-RF
          Secondary FlyBase IDs
            References (0)