FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Sh-RT
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General Information
Symbol
Dmel\Sh-RT
Species
D. melanogaster
Annotation Symbol
CG12348-RT
FlyBase ID
FBtr0346706
Feature type
mRNA
Associated gene
Dmel\Sh
Evidence Rank
Length (nt)
2781
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 2 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTCGTCGCAGTCGCAGTCACGTCGTCACAACGTAATCGTGCAACGCGTTCCGCGCTTGGCGGCGACTGTCGTCAGTCAG
TCAATCAATCAGTCAGTCAGTCAGTCAGTCCGTCAGTCAGTCGGTCAGTCAGTTAGTCAGCCAGCTAGTCAGTTAGCTAG
TCATTCATTCAGTCAGTCAATCAGTCAGTGTGTCAATCTGACAATTGGAGTTTCTATCCAGACTTCAATATTTTTTTACC
TCGCTCAAAACCCCCCACTCGCACTTTAAATAATAAAAAAAAGCAGGTGGTGCGTGCCGCGTAGCCGCGCGTGATTCTTG
TTGTTGTTTTTTTTTTTTCGGTGAATCTCTTGTAACCATGTACCAAAGTTCTTTGCCGCGAAAACTAAAATGAAAACGAA
AGTGAAAATGAGCGAATGGCAGCCGCGGCCACAGCAATCGATCCATGACACAACCAGTGACAAGCAGTCCCCCAGTGAAA
CCGCATCCGCATCCGAGTCCGATACCGATAAAGATTCTGAATCGGAGTGAGTGCCGCGTCCGAGAGCGTTCCCTGTCCAC
GTCCACCATCGGCGGAGCAGGTGTGCCTGAGGCCCACCTGGTGGCATGGCCGCCGTTGCCGGCCTCTATGGCCTTGGGGA
GGATCGCCAGCACCGCAAGAAGCAGCAGCAACAGCAGCAGCACCAGAAGGAGCAGCTCGAGCAGAAGGAGGAGCAAAAGA
AGATCGCCGAGCGGAAGCTGCAGCTGCGGGAGCAGCAGCTCCAGCGCAACTCCCTCGATGGTTACGGGTCTTTGCCCAAA
TTGAGCAGTCAAGACGAAGAAGGGGGGGCTGGTCATGGCTTTGGTGGCGGACCGCAACACTTTGAACCCATTCCTCACGA
TCATGATTTCTGCGAAAGAGTCGTTATAAATGTAAGCGGATTAAGGTTTGAGACACAACTACGTACGTTAAATCAATTCC
CGGACACGCTGCTTGGGGATCCAGCTCGGAGATTACGGTACTTTGACCCGCTTAGAAATGAATATTTTTTTGACCGTAGT
CGACCGAGCTTCGATGCGATTTTATACTATTATCAGAGTGGTGGCCGACTACGGAGACCGGTCAATGTCCCTTTAGACGT
ATTTAGTGAAGAAATAAAATTTTATGAATTAGGTGATCAAGCAATTAATAAATTCAGAGAGGATGAAGGCTTTATTAAAG
AGGAAGAAAGACCATTACCGGATAATGAGAAACAGAGAAAAGTCTGGCTGCTCTTCGAGTATCCAGAAAGTTCGCAAGCC
GCCAGAGTTGTAGCCATAATTAGTGTATTTGTTATATTGCTATCAATTGTTATATTTTGTCTAGAAACATTACCCGAATT
TAAGCATTACAAGGTGTTCAATACAACAACAAATGGCACAAAAATCGAGGAAGACGAGGTGCCTGACATCACAGATCCTT
TCTTCCTTATAGAAACGTTATGTATTATTTGGTTTACATTTGAACTAACTGTCAGGTTCCTCGCATGTCCGAACAAATTA
AATTTCTGCAGGGATGTCATGAATGTTATCGACATAATCGCCATCATTCCGTACTTTATAACACTAGCGACTGTCGTTGC
CGAAGAGGAGGATACGTTAAATCTTCCAAAAGCGCCAGTCAGTCCACAGGACAAGTCATCGAATCAGGCTATGTCCTTGG
CAATATTACGAGTGATACGATTAGTTCGAGTATTTCGAATATTTAAGTTATCTAGGCATTCGAAGGGTTTACAAATATTA
GGACGAACTCTGAAAGCCTCAATGCGGGAATTAGGTTTACTTATATTTTTCTTATTTATAGGCGTGGTCCTGTTCTCGTC
GGCGGTTTATTTCGCGGAGGCTGGCAGCGACAGTTCCTTTTTCAAGTCGATACCGGACGGCTTCTGGTGGGCTGTGGTGA
CCATGACGACGGTGGGATATGGTGATATGAGACCCGTCGGCGTTTGGGGCAAGATTGTGGGATCACTTTGTGCCATTGCT
GGCGTGCTGACCATCGCACTGCCGGTGCCGGTCATCGTCAGCAATTTCAACTACTTCTATCACCGCGAAACGGATCAGGA
GGAGATGCAGAGCCAGAACTTTAATCACGTTACTAGTTGTCCATATTTGCCAGGTACATTAGGTCAACACATGAAGAAAT
CATCATTGTCTGAGTCCTCATCGGATATGATGGATTTGGACGATGGTGTCGAGTCCACGCCGGGATTGACAGAAACACAT
CCTGGACGCAGTGCGGTGGCTCCATTTTTGGGAGCCCAGCAGCAGCAGCAACAACCGGTAGCATCCTCACTGTCGATGTC
GATCGACAAACAACTGCAGCACCCACTGCAGCAGCTGACGCAGACGCAACTGTACCAACAGCAGCAACAGCAGCAGCAGC
AGCAGCAAAACGGCTTCAAGCAGCAGCAGCAACAGACGCAGCAGCAGCTGCAACAGCAACAGTCCCACACAATAAACGCA
AGTGCAGCAGCGGCGACGAGCGGCAGCGGCAGTAGCGGTCTCACCATGAGGCACAATAATGCCCTGGCCGTTAGTATCGA
GACCGACGTTTGACTACTGGTGCAAAAGACGTTGCGTGGTATAAATTTGGCCTTGACAGGAGTTACGTTGGATGCCAGAA
ACGACTACAAAAGCTGTTTATATTTAATTTAAGTAGAACAAATAACAAAAACAAATTTAATCTATTGCTAAATTAAATTA
AAATCTAAATTAAAATCTAAATTAATTTAATTAAATTATACATTTAATGATAAACAACACT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Sh-RA
        FBtr0089659
        1814
        Sh-RB
        FBtr0089658
        7860
        Sh-RC
        FBtr0089661
        12181
        Sh-RD
        FBtr0089660
        2442
        Sh-RE
        FBtr0089657
        2781
        Sh-RF
        FBtr0089663
        1774
        Sh-RH
        FBtr0301955
        1286
        Sh-RI
        FBtr0302902
        6786
        Sh-RJ
        FBtr0302903
        4135
        Sh-RK
        FBtr0308199
        2221
        Sh-RL
        FBtr0308200
        4138
        Sh-RM
        FBtr0332299
        3578
        Sh-RQ
        FBtr0346703
        2843
        Sh-RS
        FBtr0346705
        3836
        Sh-RU
        FBtr0481638
        2370
        Sh-RV
        FBtr0481639
        2243
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Sh-PT
        FBpp0312319
        655
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Sh-PA
        FBpp0088601
        304
        Sh-PB
        FBpp0088600
        616
        Sh-PC
        FBpp0088603
        643
        Sh-PD
        FBpp0088602
        571
        Sh-PE
        FBpp0088599
        655
        Sh-PF
        FBpp0088605
        349
        Sh-PH
        FBpp0291167
        304
        Sh-PI
        FBpp0292033
        643
        Sh-PJ
        FBpp0292034
        643
        Sh-PK
        FBpp0300519
        297
        Sh-PL
        FBpp0300520
        644
        Sh-PM
        FBpp0304578
        337
        Sh-PQ
        FBpp0312316
        616
        Sh-PS
        FBpp0312318
        604
        Sh-PU
        FBpp0428419
        587
        Sh-PV
        FBpp0428420
        626
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Alternative exon predicted by MXE analysis (FBrf0222673).

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Sh-RT
        Secondary FlyBase IDs
          References (0)